UHGV-0157401 (vOTU-078649)

Viral Genome: UHGV-0157401

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0157401
vOTU ID	vOTU-078649
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_472039
Associated BioSample	SAMN06111939
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	93.88 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	20
CheckV host markers	5
Recoded stop codon	No

Viral Content
geNomad score	0.975
Virus hallmark genes (geNomad)	12
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	58.23
Jumbo phage	No

Genome content
Genome length (bp)	37,822
GC content	44.59%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	92%
Average CDS length (bps)	579.10
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0157401_1	K01185	126.3	3.9e-37	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0157401_1	phrog_7	181.6	0	endolysin	lysis
UniRef90	UHGV-0157401_1	UniRef90_R5IS13	377.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-0157401_1	397291.C804_01109	132.0	5.86e-33	Phage lysozyme	N/A
Pfam	UHGV-0157401_1	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-0157401_1	PF01473	N/A	N/A	Putative cell wall binding repeat	Choline_bind_1
COG	UHGV-0157401_1	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
HAMAP	UHGV-0157401_1	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0157401_1	PF19127,MF_04110,TIGR04035,COG3772	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_2	phrog_1129	74.1	1.3e-21	holin	lysis
UniRef90	UHGV-0157401_2	UniRef90_A0A3R6U6I1	148.0	5.60519e-45	Enolase	N/A
eggNOG-mapper	UHGV-0157401_2	1321782.HMPREF1986_00360	111.0	3.95e-31	N/A	N/A
Pfam	UHGV-0157401_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0157401_2	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_3	phrog_4105	107.2	8.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0157401_3	657322.FPR_27220	97.8	6.01e-25	N/A	N/A
PHROG	UHGV-0157401_4	phrog_20274	143.4	1.00053e-42	N/A	unknown function
UniRef90	UHGV-0157401_4	UniRef90_D7GNX6	256.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0157401_4	411902.CLOBOL_05645	226.0	0	N/A	N/A
Pfam	UHGV-0157401_4	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0157401_4	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0157401_4	PF06541,COG4905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0157401_5	UniRef90_A0A417WCN8	405.0	0	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-0157401_5	411902.CLOBOL_05646	281.0	0	N/A	N/A
structural_annotation	UHGV-0157401_5	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-0157401_10	K04763	226.1	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0157401_10	phrog_1	170.3	0	integrase	integration and excision
UniRef90	UHGV-0157401_10	UniRef90_A0A6N3I491	512.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0157401_10	411902.CLOBOL_03456	513.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0157401_10	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0157401_10	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0157401_10	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0157401_10	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-0157401_11	PF09458	N/A	N/A	H-type lectin domain	H_lectin
eggNOG-mapper	UHGV-0157401_12	610130.Closa_0759	108.0	2.24e-24	N/A	N/A
PHROG	UHGV-0157401_13	phrog_17196	78.5	5.4e-23	kinase	other
UniRef90	UHGV-0157401_13	UniRef90_A0A2M8Z316	149.0	8.09e-40	Collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0157401_13	742733.HMPREF9469_01805	207.0	0	N/A	N/A
structural_annotation	UHGV-0157401_13	PF13619,COG3536	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_15	phrog_18190	470.9	0	N/A	unknown function
UniRef90	UHGV-0157401_15	UniRef90_UPI0015934142	837.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0157401_15	742733.HMPREF9469_01807	718.0	0	N/A	N/A
Pfam	UHGV-0157401_15	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0157401_15	PF14594,NF033848,COG3501	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_16	phrog_1194	45.3	0.0000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0157401_16	1304866.K413DRAFT_3047	180.0	0	N/A	N/A
Pfam	UHGV-0157401_16	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0157401_16	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_17	phrog_1535	301.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0157401_17	33035.JPJF01000093_gene2243	261.0	0	phage tail tape measure protein	N/A
COG	UHGV-0157401_17	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0157401_17	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_18	phrog_706	132.7	2.6e-39	N/A	unknown function
UniRef90	UHGV-0157401_18	UniRef90_UPI0011DC8B0C	272.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0157401_18	411902.CLOBOL_00127	234.0	0	N/A	N/A
Pfam	UHGV-0157401_18	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0157401_18	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_19	phrog_11299	180.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0157401_19	1298920.KI911353_gene2067	112.0	1.83e-29	N/A	N/A
structural_annotation	UHGV-0157401_19	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_20	phrog_3099	153.8	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0157401_20	411902.CLOBOL_00129	263.0	0	N/A	N/A
structural_annotation	UHGV-0157401_20	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_21	phrog_3266	130.7	6.5e-39	tail completion	connector
eggNOG-mapper	UHGV-0157401_21	411902.CLOBOL_00130	211.0	0	N/A	N/A
structural_annotation	UHGV-0157401_21	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_22	phrog_556	91.5	3.6e-27	minor head protein	head and packaging
UniRef90	UHGV-0157401_22	UniRef90_UPI0015948E32	215.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0157401_22	411902.CLOBOL_00131	217.0	0	Minor capsid protein	N/A
Pfam	UHGV-0157401_22	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0157401_22	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_23	phrog_3366	85.5	4.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0157401_23	411902.CLOBOL_00132	191.0	0	N/A	N/A
Pfam	UHGV-0157401_23	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0157401_23	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_24	phrog_541	106.1	2.4e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0157401_24	411902.CLOBOL_00133	159.0	0	N/A	N/A
PHROG	UHGV-0157401_25	phrog_10	185.3	0	major head protein	head and packaging
UniRef90	UHGV-0157401_25	UniRef90_A0A3R6X865	713.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0157401_25	411902.CLOBOL_00134	689.0	0	Phage capsid family	N/A
Pfam	UHGV-0157401_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0157401_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0157401_25	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0157401_25	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_26	phrog_194	92.6	6e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0157401_26	UniRef90_UPI000E449396	265.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0157401_26	411902.CLOBOL_00135	240.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0157401_26	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0157401_26	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_27	phrog_355	60.0	3.7e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0157401_27	UniRef90_A0A396KGT7	215.0	0	N/A	N/A
eggNOG-mapper	UHGV-0157401_27	97138.C820_00250	130.0	6.82e-38	N/A	N/A
Pfam	UHGV-0157401_27	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0157401_27	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_28	phrog_30750	57.1	2.3e-16	N/A	unknown function
PHROG	UHGV-0157401_29	phrog_27009	123.0	9.9e-37	N/A	unknown function
PHROG	UHGV-0157401_30	phrog_581	308.2	0	minor head protein	head and packaging
UniRef90	UHGV-0157401_30	UniRef90_UPI001D0859FA	778.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0157401_30	411902.CLOBOL_00137	585.0	0	N/A	N/A
Pfam	UHGV-0157401_30	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0157401_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0157401_30	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_31	phrog_533	408.8	0	portal protein	head and packaging
UniRef90	UHGV-0157401_31	UniRef90_A0A396QLL8	800.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0157401_31	411902.CLOBOL_00138	739.0	0	N/A	N/A
structural_annotation	UHGV-0157401_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0157401_32	K06909	98.1	1.3e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0157401_32	phrog_2	103.0	5.5e-30	terminase large subunit	head and packaging
UniRef90	UHGV-0157401_32	UniRef90_R5ILS3	819.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0157401_32	1449050.JNLE01000003_gene3895	595.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0157401_32	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0157401_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0157401_32	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_33	phrog_509	277.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0157401_33	UniRef90_R5J299	433.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0157401_33	552396.HMPREF0863_04210	278.0	0	DNA packaging	N/A
Pfam	UHGV-0157401_33	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0157401_33	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0157401_33	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0157401_33	PF06056,NF040601,COG5484	N/A	N/A	N/A	N/A
Pfam	UHGV-0157401_36	PF21732	N/A	N/A	N/A	DUF6864
structural_annotation	UHGV-0157401_36	PF21732	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_37	phrog_36	56.1	8.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0157401_37	UniRef90_A0A416GU18	217.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0157401_37	742740.HMPREF9474_03497	178.0	0	N/A	N/A
structural_annotation	UHGV-0157401_37	PF02996	N/A	N/A	N/A	N/A
UniRef90	UHGV-0157401_38	UniRef90_R6ZHB9	86.7	2.19e-19	Putative bacteriocin ABC transporter	N/A
eggNOG-mapper	UHGV-0157401_38	742733.HMPREF9469_02894	108.0	1.37e-28	N/A	N/A
structural_annotation	UHGV-0157401_38	PF19962,COG1579	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_43	phrog_15198	52.7	0.0000000000000073	N/A	unknown function
UniRef90	UHGV-0157401_43	UniRef90_A0A3R6QEJ7	239.0	0	N/A	N/A
eggNOG-mapper	UHGV-0157401_43	1256908.HMPREF0373_00667	91.3	2.18e-21	N/A	N/A
Pfam	UHGV-0157401_43	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0157401_43	NF041588	N/A	N/A	N/A	N/A
Pfam	UHGV-0157401_45	PF01022	N/A	N/A	Bacterial regulatory protein, arsR family	HTH_5
structural_annotation	UHGV-0157401_45	PF13384,COG1710	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_46	phrog_15077	206.8	0	N/A	unknown function
UniRef90	UHGV-0157401_46	UniRef90_A0A1M6RQ18	199.0	0	RNA polymerase, alpha chain C terminal domain	N/A
eggNOG-mapper	UHGV-0157401_46	742740.HMPREF9474_03494	313.0	0	N/A	N/A
structural_annotation	UHGV-0157401_46	NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_47	phrog_2562	175.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0157401_47	UniRef90_UPI000462AB4A	325.0	0	N/A	N/A
eggNOG-mapper	UHGV-0157401_47	1196322.A370_04251	186.0	0	N/A	N/A
Pfam	UHGV-0157401_47	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0157401_47	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0157401_47	PF14297	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_48	phrog_244	81.9	1e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0157401_48	742740.HMPREF9474_03491	189.0	0	N/A	N/A
PHROG	UHGV-0157401_49	phrog_1029	259.1	0	N/A	unknown function
UniRef90	UHGV-0157401_49	UniRef90_E7GRE5	312.0	0	N/A	N/A
eggNOG-mapper	UHGV-0157401_49	742740.HMPREF9474_03490	312.0	0	N/A	N/A
structural_annotation	UHGV-0157401_49	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_51	phrog_997	81.6	1.1e-23	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0157401_51	UniRef90_A0A417AC21	144.0	8.54932e-42	Replication terminator protein	N/A
eggNOG-mapper	UHGV-0157401_51	1231336.L248_2133	69.7	0.000000000000346	N/A	N/A
PHROG	UHGV-0157401_52	phrog_148	40.6	0.000000000038	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0157401_52	742765.HMPREF9457_02107	75.5	0.00000000000000327	RecT family	N/A
COG	UHGV-0157401_52	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
eggNOG-mapper	UHGV-0157401_53	742740.HMPREF9474_03487	65.1	0.0000000000516	N/A	N/A
PHROG	UHGV-0157401_54	phrog_674	118.6	5.3e-35	N/A	unknown function
UniRef90	UHGV-0157401_54	UniRef90_A0A417UIF1	357.0	0	N/A	N/A
eggNOG-mapper	UHGV-0157401_54	742740.HMPREF9474_03487	257.0	0	N/A	N/A
Pfam	UHGV-0157401_54	PF07083	N/A	N/A	N/A	DUF1351
PHROG	UHGV-0157401_55	phrog_10455	91.2	8.2e-27	N/A	unknown function
UniRef90	UHGV-0157401_55	UniRef90_R7N9Z9	108.0	1.95e-28	Conserved domain protein	N/A
PHROG	UHGV-0157401_56	phrog_434	184.8	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0157401_56	UniRef90_A0A412YTC0	367.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0157401_56	742740.HMPREF9474_03486	352.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0157401_56	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0157401_56	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0157401_56	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0157401_56	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_58	phrog_3777	62.2	6.3e-18	N/A	unknown function
UniRef90	UHGV-0157401_58	UniRef90_A0A3R6RW84	144.0	2.57979e-42	N/A	N/A
eggNOG-mapper	UHGV-0157401_58	411460.RUMTOR_02064	105.0	5.87e-28	N/A	N/A
Pfam	UHGV-0157401_58	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0157401_58	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-0157401_60	phrog_2232	195.0	0	N/A	unknown function
UniRef90	UHGV-0157401_60	UniRef90_A0A417QPJ8	251.0	0	N/A	N/A
eggNOG-mapper	UHGV-0157401_60	397288.C806_01275	140.0	4.79e-38	N/A	N/A
Pfam	UHGV-0157401_60	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-0157401_60	PF14337,TIGR03899	N/A	N/A	N/A	N/A