UHGV-0157666 (vOTU-153056)

Viral Genome: UHGV-0157666

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0157666
vOTU ID	vOTU-153056
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_460187
Associated BioSample	SAMN05971629
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.47 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	23
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	55.06
Jumbo phage	No

Genome content
Genome length (bp)	23,234
GC content	38.87%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	26
CDS density	93%
Average CDS length (bps)	831.69
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0157666_1	phrog_998	163.3	0	endolysin	lysis
UniRef90	UHGV-0157666_1	UniRef90_A0A6G8B014	153.0	1.4013e-45	Lysin	N/A
eggNOG-mapper	UHGV-0157666_1	1123298.KB904077_gene474	139.0	4.72e-39	cysteine-type peptidase activity	N/A
Pfam	UHGV-0157666_1	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-0157666_1	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
PHROG	UHGV-0157666_3	phrog_881	74.7	7.9e-22	holin	lysis
UniRef90	UHGV-0157666_3	UniRef90_A0A0D6E072	147.0	7.00649e-45	Phage holin	N/A
eggNOG-mapper	UHGV-0157666_3	59241.E7DNC2_BPDP1	64.3	0.000000000000798	Pfam:Phage_holin_Dp1	N/A
Pfam	UHGV-0157666_3	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0157666_3	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_4	phrog_689	75.6	5.5e-22	holin	lysis
UniRef90	UHGV-0157666_4	UniRef90_A0A0D6DZB6	157.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0157666_4	1201292.DR75_1622	68.9	0.0000000000000175	Haemolysin XhlA	N/A
Pfam	UHGV-0157666_4	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
KOfam	UHGV-0157666_5	K01447	69.9	5.2e-20	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0157666_5	phrog_8164	109.8	2e-32	endolysin	lysis
UniRef90	UHGV-0157666_5	UniRef90_A0A2C8EHK7	639.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0157666_5	1589270.A0A0B5A075_9CAUD	195.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0157666_5	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
structural_annotation	UHGV-0157666_5	PF16775,PF01510,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_6	phrog_2566	92.4	2.9e-27	N/A	unknown function
UniRef90	UHGV-0157666_6	UniRef90_A0A2C8EG18	128.0	2.87e-37	Prophage pi2 protein 49	N/A
eggNOG-mapper	UHGV-0157666_6	272623.L69746	108.0	2.9e-30	N/A	N/A
PHROG	UHGV-0157666_7	phrog_1401	120.2	1.1e-35	N/A	unknown function
UniRef90	UHGV-0157666_7	UniRef90_UPI001436B7B7	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-0157666_7	1231377.C426_2224	119.0	7.83e-33	N/A	N/A
Pfam	UHGV-0157666_7	PF07761	N/A	N/A	N/A	DUF1617
structural_annotation	UHGV-0157666_7	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_8	phrog_1330	275.0	0	tail protein	tail
eggNOG-mapper	UHGV-0157666_8	1229517.AMFD01000018_gene173	793.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0157666_8	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0157666_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0157666_8	COG4926	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-0157666_9	UniRef90_A0A0D6DW38	436.0	0	Prophage pi2 protein 43	N/A
eggNOG-mapper	UHGV-0157666_9	1229517.AMFD01000018_gene174	151.0	1.36066e-42	phage tail	N/A
COG	UHGV-0157666_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0157666_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_10	phrog_1686	387.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0157666_10	UniRef90_UPI001432E2C5	468.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0157666_10	764299.STRIC_2538	309.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0157666_10	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0157666_10	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0157666_10	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0157666_10	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_11	phrog_706	194.0	0	N/A	unknown function
UniRef90	UHGV-0157666_11	UniRef90_UPI001E4910F4	203.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0157666_11	1229517.AMFD01000018_gene176	186.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0157666_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0157666_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_12	phrog_1061	72.5	7.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0157666_12	1134413.ANNK01000120_gene2017	53.1	0.000000308	N/A	N/A
structural_annotation	UHGV-0157666_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_13	phrog_820	189.0	0	major tail protein	tail
UniRef90	UHGV-0157666_13	UniRef90_A0A0V8BML3	226.0	0	Phage major tail shaft protein	N/A
eggNOG-mapper	UHGV-0157666_13	1234679.BN424_2617	211.0	0	domain, Protein	N/A
COG	UHGV-0157666_13	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0157666_13	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_14	phrog_913	135.6	1.8e-40	minor head protein	head and packaging
UniRef90	UHGV-0157666_14	UniRef90_K8E5K9	159.0	0	Minor capsid protein R135	N/A
eggNOG-mapper	UHGV-0157666_14	1234679.BN424_2618	159.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-0157666_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0157666_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_15	phrog_556	101.1	7.7e-30	minor head protein	head and packaging
UniRef90	UHGV-0157666_15	UniRef90_A0A315ZVX7	156.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0157666_15	1214217.ALNF01000014_gene1371	142.0	1.62971e-42	Minor capsid protein	N/A
Pfam	UHGV-0157666_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0157666_15	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_16	phrog_793	107.0	1.2e-31	head-tail adaptor	connector
UniRef90	UHGV-0157666_16	UniRef90_UPI001C0FC740	149.0	2.24208e-44	minor capsid protein	N/A
eggNOG-mapper	UHGV-0157666_16	294382.Q5YA67_9CAUD	137.0	1.4e-40	Minor capsid protein	N/A
Pfam	UHGV-0157666_16	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-0157666_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_17	phrog_541	127.9	4.2e-38	head-tail adaptor	connector
UniRef90	UHGV-0157666_17	UniRef90_I6SVS1	170.0	0	Protein gp8	N/A
eggNOG-mapper	UHGV-0157666_17	1158601.I585_01155	182.0	0	N/A	N/A
PHROG	UHGV-0157666_18	phrog_840	372.3	0	major head protein	head and packaging
UniRef90	UHGV-0157666_18	UniRef90_K8ETV7	467.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0157666_18	1234679.BN424_2622	467.0	0	N/A	N/A
structural_annotation	UHGV-0157666_18	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_19	phrog_194	140.6	1.19993e-41	head scaffolding protein	head and packaging
UniRef90	UHGV-0157666_19	UniRef90_UPI0013FE2A03	219.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0157666_19	1234679.BN424_2623	192.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0157666_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0157666_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_20	phrog_581	340.5	0	minor head protein	head and packaging
UniRef90	UHGV-0157666_20	UniRef90_UPI001C1133B3	593.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0157666_20	1158601.I585_01158	605.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0157666_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0157666_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0157666_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_21	phrog_533	490.6	0	portal protein	head and packaging
UniRef90	UHGV-0157666_21	UniRef90_V7ZN55	666.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0157666_21	768486.EHR_02635	635.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0157666_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0157666_21	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0157666_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0157666_22	K06909	261.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0157666_22	phrog_3717	159.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0157666_22	UniRef90_V7ZP56	740.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0157666_22	294382.Q5YA76_9CAUD	644.0	0	Pfam:Terminase_3C	N/A
Pfam	UHGV-0157666_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0157666_22	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0157666_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
structural_annotation	UHGV-0157666_22	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0157666_23	K07474	97.4	3.1e-28	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0157666_23	phrog_51	98.2	8e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0157666_23	UniRef90_Q9XJG1	183.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0157666_23	1486428.A0A097BYA2_9CAUD	184.0	0	Terminase small subunit	N/A
Pfam	UHGV-0157666_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-0157666_23	PF03592	N/A	N/A	N/A	N/A
PHROG	UHGV-0157666_24	phrog_248	78.1	1.5e-22	transcriptional activator	transcription regulation
UniRef90	UHGV-0157666_24	UniRef90_A0A0D6E0A0	262.0	0	ArpU family phage transcriptional regulator	N/A
NCBIFam	UHGV-0157666_24	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0157666_24	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
UniRef90	UHGV-0157666_25	UniRef90_A0A0D6DZF2	157.0	0	N/A	N/A
PHROG	UHGV-0157666_26	phrog_121	69.3	7e-20	N/A	unknown function
UniRef90	UHGV-0157666_26	UniRef90_UPI00071D6E53	74.7	0.0000000000000271	N/A	N/A
eggNOG-mapper	UHGV-0157666_26	1154860.SAG0136_08000	52.8	0.00000109	N/A	N/A
Pfam	UHGV-0157666_26	PF07852	N/A	N/A	N/A	DUF1642