UHGV-0158225 (vOTU-015190)

Viral Genome: UHGV-0158225

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0158225
vOTU ID	vOTU-015190
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_480222
Associated BioSample	SAMN06115439
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	82.58 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9754
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	59.03
Jumbo phage	No

Genome content
Genome length (bp)	35,532
GC content	57.69%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	54
CDS density	94%
Average CDS length (bps)	616.06
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 82.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0158225_1	UniRef90_UPI00195A5197	126.0	7.98e-34	translation initiation factor 2	N/A
eggNOG-mapper	UHGV-0158225_1	428125.CLOLEP_02252	105.0	1.44e-26	N/A	N/A
KOfam	UHGV-0158225_2	K00558	75.5	6.3e-22	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0158225_2	phrog_363	84.0	1.7e-24	DNA methyltransferase	other
UniRef90	UHGV-0158225_2	UniRef90_A0A1Q6T5P2	140.0	1.57996e-41	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0158225_2	428125.CLOLEP_00771	149.0	1.3999e-42	N/A	N/A
PADLOC	UHGV-0158225_2	MTase_II_00058	90.3	4.5e-26	Type II methyltransferase	RM
Pfam	UHGV-0158225_2	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0158225_2	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0158225_3	K07727	90.0	4.4e-26	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0158225_3	UniRef90_UPI001C3AB1F3	173.0	0	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0158225_3	445972.ANACOL_00561	126.0	6.19e-37	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0158225_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0158225_3	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0158225_3	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0158225_4	K06223	222.6	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0158225_4	phrog_56	189.9	0	DNA methyltransferase	other
UniRef90	UHGV-0158225_4	UniRef90_UPI001C3B62EA	513.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0158225_4	411471.SUBVAR_06973	370.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0158225_4	MTase_II_00039	138.7	9.40005e-41	Type II methyltransferase	RM
Pfam	UHGV-0158225_4	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0158225_4	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0158225_4	PF02086,TIGR00571,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_5	phrog_13256	45.7	0.00000000000084	N/A	unknown function
eggNOG-mapper	UHGV-0158225_5	1226322.HMPREF1545_02800	56.2	0.000000000539	N/A	N/A
PHROG	UHGV-0158225_6	phrog_355	50.6	0.000000000000027	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0158225_6	UniRef90_A0A658K045	96.7	5.73e-24	N/A	N/A
eggNOG-mapper	UHGV-0158225_6	999411.HMPREF1092_00897	91.7	9.57e-23	N/A	N/A
Pfam	UHGV-0158225_6	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0158225_6	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0158225_7	K07273	179.8	0	acm; lysozyme	N/A
PHROG	UHGV-0158225_7	phrog_291	151.5	5.60519e-45	endolysin	lysis
UniRef90	UHGV-0158225_7	UniRef90_A0A367G061	531.0	0	Peptidase_M23 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0158225_7	411471.SUBVAR_06927	326.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0158225_7	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-0158225_7	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0158225_7	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0158225_7	PF01551,PF01183,NF040883,COG0739,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_8	phrog_24267	59.7	7e-17	N/A	unknown function
UniRef90	UHGV-0158225_8	UniRef90_G4Q8U0	66.6	0.00000000163	Side tail fiber protein from lambdoid prophage Rac	N/A
eggNOG-mapper	UHGV-0158225_8	508419.F8J176_9CAUD	114.0	5.36e-26	peptidoglycan catabolic process	N/A
Pfam	UHGV-0158225_8	PF11133	N/A	N/A	Head fiber protein	Phage_head_fibr
Pfam	UHGV-0158225_8	PF03406	N/A	N/A	Phage tail fibre repeat	Phage_fiber_2
PHROG	UHGV-0158225_9	phrog_19111	52.4	9.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0158225_9	756499.Desde_3162	111.0	7.24e-25	nuclear chromosome segregation	N/A
COG	UHGV-0158225_9	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0158225_11	phrog_13589	174.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0158225_11	428125.CLOLEP_01434	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158225_12	428125.CLOLEP_01433	53.5	0.0000000341	N/A	N/A
PHROG	UHGV-0158225_16	phrog_18444	79.4	3e-23	N/A	unknown function
UniRef90	UHGV-0158225_16	UniRef90_UPI0011788049	50.1	0.00000121	peptide chain release factor 2	N/A
eggNOG-mapper	UHGV-0158225_16	1294142.CINTURNW_1707	58.9	0.0000000000598	N/A	N/A
PHROG	UHGV-0158225_17	phrog_6616	105.3	1.2e-39	tail protein	tail
eggNOG-mapper	UHGV-0158225_17	411471.SUBVAR_06932	304.0	0	N/A	N/A
structural_annotation	UHGV-0158225_17	PF05954,PF00629,PF03424,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_18	phrog_1194	58.2	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0158225_18	411471.SUBVAR_06933	201.0	0	N/A	N/A
structural_annotation	UHGV-0158225_18	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_19	phrog_1535	232.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0158225_19	665956.HMPREF1032_03628	178.0	6.92241e-43	domain protein	N/A
COG	UHGV-0158225_19	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_20	phrog_706	117.7	9.8e-35	N/A	unknown function
UniRef90	UHGV-0158225_20	UniRef90_UPI0019576839	207.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0158225_20	1226322.HMPREF1545_00058	164.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0158225_20	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0158225_20	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_21	phrog_11299	92.7	4.4e-27	N/A	unknown function
UniRef90	UHGV-0158225_21	UniRef90_UPI001C03A209	142.0	1.98001e-40	V-type proton ATPase subunit E	N/A
eggNOG-mapper	UHGV-0158225_21	411471.SUBVAR_06935	145.0	4.58995e-41	N/A	N/A
PHROG	UHGV-0158225_22	phrog_3099	154.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0158225_22	411471.SUBVAR_06936	221.0	0	N/A	N/A
structural_annotation	UHGV-0158225_22	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_23	phrog_3266	41.5	0.000000000017	tail completion	connector
eggNOG-mapper	UHGV-0158225_23	693746.OBV_18140	169.0	0	N/A	N/A
structural_annotation	UHGV-0158225_23	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_24	phrog_556	51.5	0.000000000000019	minor head protein	head and packaging
UniRef90	UHGV-0158225_24	UniRef90_UPI001967B4B3	161.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0158225_24	1292035.H476_1011	50.1	0.0000046	Minor capsid protein	N/A
Pfam	UHGV-0158225_24	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0158225_24	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_25	phrog_3366	42.2	0.000000000013	N/A	unknown function
structural_annotation	UHGV-0158225_25	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0158225_26	693746.OBV_18110	107.0	1.68e-28	N/A	N/A
PHROG	UHGV-0158225_28	phrog_422	236.6	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0158225_28	693746.OBV_18090	358.0	0	N/A	N/A
structural_annotation	UHGV-0158225_28	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_29	phrog_194	102.2	6.3e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-0158225_29	UniRef90_A0A4R1QTK7	196.0	0	Minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0158225_29	411471.SUBVAR_06994	249.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0158225_29	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0158225_29	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_32	phrog_581	189.3	0	minor head protein	head and packaging
UniRef90	UHGV-0158225_32	UniRef90_UPI00196795ED	339.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0158225_32	411471.SUBVAR_06995	571.0	0	N/A	N/A
Pfam	UHGV-0158225_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0158225_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0158225_32	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_33	phrog_533	184.5	0	portal protein	head and packaging
UniRef90	UHGV-0158225_33	UniRef90_D1PRG7	667.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0158225_33	411471.SUBVAR_06996	667.0	0	N/A	N/A
structural_annotation	UHGV-0158225_33	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0158225_36	K06909	381.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0158225_36	phrog_3717	149.8	1.4013e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0158225_36	UniRef90_D1PRG9	811.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0158225_36	411471.SUBVAR_06998	811.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0158225_36	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0158225_36	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0158225_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0158225_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0158225_36	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_37	phrog_24579	43.2	0.0000000000063	terminase small subunit	head and packaging
UniRef90	UHGV-0158225_37	UniRef90_A0A1Y4TKH5	87.8	1.66e-20	HTH_Tnp_1_2 domain-containing protein	N/A
KOfam	UHGV-0158225_39	K05785	52.1	0.00000000000001	rfaH; transcriptional antiterminator RfaH	N/A
PHROG	UHGV-0158225_39	phrog_6386	77.9	1.3e-22	transcription antiterminator	transcription regulation
UniRef90	UHGV-0158225_39	UniRef90_A0A2V2FE50	306.0	0	Antitermination protein NusG	N/A
eggNOG-mapper	UHGV-0158225_39	411471.SUBVAR_07000	301.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-0158225_39	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0158225_39	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0158225_39	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_40	phrog_426	102.6	5.1e-30	terminase small subunit	head and packaging
UniRef90	UHGV-0158225_40	UniRef90_A0A6N8H2N8	304.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158225_40	411471.SUBVAR_07001	325.0	0	N/A	N/A
Pfam	UHGV-0158225_40	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0158225_40	PF11985	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_41	phrog_25462	72.4	6.1e-21	N/A	unknown function
UniRef90	UHGV-0158225_41	UniRef90_A0A2V2FBL8	167.0	0	Type VI secretion protein	N/A
eggNOG-mapper	UHGV-0158225_41	552398.HMPREF0866_03124	89.7	8.6e-22	N/A	N/A
structural_annotation	UHGV-0158225_41	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0158225_42	411471.SUBVAR_07003	167.0	0	N/A	N/A
PHROG	UHGV-0158225_43	phrog_836	60.3	1.7e-17	late transcriptional activator	transcription regulation
UniRef90	UHGV-0158225_43	UniRef90_A0A2V2FI75	139.0	6.67004e-41	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0158225_43	411471.SUBVAR_07004	116.0	1.52e-32	Mor transcription activator	N/A
Pfam	UHGV-0158225_43	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0158225_43	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0158225_43	PF08765,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_44	phrog_286	77.5	2.3e-22	N/A	unknown function
UniRef90	UHGV-0158225_44	UniRef90_A0A2V2FEY3	180.0	0	Regulatory protein GemA	N/A
eggNOG-mapper	UHGV-0158225_44	411471.SUBVAR_07005	171.0	0	N/A	N/A
Pfam	UHGV-0158225_44	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0158225_44	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_45	phrog_491	107.8	9.1e-32	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0158225_45	UniRef90_D1PRH7	260.0	0	Putative bacteriophage Mu Gam like protein	N/A
eggNOG-mapper	UHGV-0158225_45	411471.SUBVAR_07006	260.0	0	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0158225_45	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
COG	UHGV-0158225_45	COG4396	N/A	N/A	Mu-like prophage host-nuclease inhibitor protein Gam	N/A
structural_annotation	UHGV-0158225_45	PF07352,COG4396	N/A	N/A	N/A	N/A
KOfam	UHGV-0158225_48	K07132	116.7	2.4e-34	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-0158225_48	phrog_296	145.6	4.30199e-43	DNA transposition protein	integration and excision
UniRef90	UHGV-0158225_48	UniRef90_A0A2V2F8S2	584.0	0	DNA transposition protein	N/A
eggNOG-mapper	UHGV-0158225_48	411471.SUBVAR_07009	538.0	0	AAA domain	N/A
Pfam	UHGV-0158225_48	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0158225_48	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0158225_48	PF13401,PF09077,PF12844,MF_01407,TIGR03015,TIGR02607,COG2842	N/A	N/A	N/A	N/A
PHROG	UHGV-0158225_49	phrog_310	355.9	0	transposase	integration and excision
UniRef90	UHGV-0158225_49	UniRef90_D1PRI1	1125.0	0	Mu transposase domain protein	N/A
eggNOG-mapper	UHGV-0158225_49	411471.SUBVAR_07010	1125.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0158225_49	TnsB_0_V-K	57.0	2.9e-16	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0158225_49	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0158225_49	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0158225_49	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0158225_49	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0158225_54	K22300	40.8	0.000000000042	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0158225_54	phrog_8	53.7	0.0000000000000047	transcriptional regulator	transcription regulation
UniRef90	UHGV-0158225_54	UniRef90_A0A2V2FBS9	202.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0158225_54	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0158225_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A