UHGV-0159417 (vOTU-068785)

Viral Genome: UHGV-0159417

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0159417
vOTU ID	vOTU-068785
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_457751
Associated BioSample	SAMN05971528
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.25 (High-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9827
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.69
Jumbo phage	No

Genome content
Genome length (bp)	36,143
GC content	47.05%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	90%
Average CDS length (bps)	653.28
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.25)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0159417_1	UniRef90_R7B5B4	222.0	0	Anti-sigma-W factor RsiW	N/A
eggNOG-mapper	UHGV-0159417_1	742741.HMPREF9475_03787	170.0	0	Putative zinc-finger	N/A
Pfam	UHGV-0159417_1	PF13490	N/A	N/A	Putative zinc-finger	zf-HC2
KOfam	UHGV-0159417_2	K17733	144.8	5.99756e-43	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0159417_2	phrog_2649	134.5	9.1e-40	endolysin	lysis
UniRef90	UHGV-0159417_2	UniRef90_A0A2T3FT45	506.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0159417_2	1235802.C823_01946	219.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0159417_2	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0159417_2	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0159417_2	PF02557,PF19127,MF_01924,NF007557,TIGR04035,COG2173	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_3	phrog_1129	73.0	2.9e-21	holin	lysis
UniRef90	UHGV-0159417_3	UniRef90_A0A3R6U6I1	135.0	8.32e-40	Enolase	N/A
eggNOG-mapper	UHGV-0159417_3	411461.DORFOR_00721	106.0	3.67e-29	N/A	N/A
Pfam	UHGV-0159417_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0159417_3	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_4	phrog_4105	101.3	5.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0159417_4	657322.FPR_27220	103.0	2.24e-27	N/A	N/A
PHROG	UHGV-0159417_5	phrog_1382	67.8	8.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0159417_5	411902.CLOBOL_00118	70.5	5.68e-16	N/A	N/A
NCBIFam	UHGV-0159417_5	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0159417_5	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_6	phrog_1382	51.0	0.000000000000015	N/A	unknown function
UniRef90	UHGV-0159417_6	UniRef90_A0A3E2UAD4	56.2	0.000000000648	ASCH domain-containing protein	N/A
NCBIFam	UHGV-0159417_6	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0159417_6	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0159417_8	411902.CLOBOL_00121	102.0	1.78e-23	nuclear chromosome segregation	N/A
COG	UHGV-0159417_8	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-0159417_9	742740.HMPREF9474_03518	186.0	0	N/A	N/A
PHROG	UHGV-0159417_10	phrog_18725	124.5	6.9e-37	N/A	unknown function
eggNOG-mapper	UHGV-0159417_10	1298920.KI911353_gene4838	234.0	0	N/A	N/A
PHROG	UHGV-0159417_11	phrog_13879	415.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0159417_11	742740.HMPREF9474_03516	919.0	0	N/A	N/A
structural_annotation	UHGV-0159417_11	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_12	phrog_1194	79.5	3.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0159417_12	742740.HMPREF9474_03515	213.0	0	N/A	N/A
structural_annotation	UHGV-0159417_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_13	phrog_1535	393.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0159417_13	UniRef90_A0A174WQ97	915.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0159417_13	742740.HMPREF9474_03514	913.0	0	tape measure	N/A
COG	UHGV-0159417_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0159417_13	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_14	phrog_8300	86.1	3.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0159417_14	742740.HMPREF9474_03512	124.0	5.75e-36	N/A	N/A
structural_annotation	UHGV-0159417_14	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_15	phrog_820	120.0	1.4e-35	major tail protein	tail
eggNOG-mapper	UHGV-0159417_15	483218.BACPEC_01149	184.0	0	domain, Protein	N/A
COG	UHGV-0159417_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159417_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_16	phrog_2595	84.8	8.9e-25	head-tail connector protein	connector
UniRef90	UHGV-0159417_16	UniRef90_UPI001D068DAC	178.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0159417_16	742740.HMPREF9474_03510	166.0	0	N/A	N/A
Pfam	UHGV-0159417_16	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0159417_16	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_17	phrog_556	62.0	8.8e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-0159417_17	742740.HMPREF9474_03509	210.0	0	N/A	N/A
PHROG	UHGV-0159417_18	phrog_8710	138.6	1.70006e-41	N/A	unknown function
eggNOG-mapper	UHGV-0159417_18	742740.HMPREF9474_03508	185.0	0	N/A	N/A
structural_annotation	UHGV-0159417_18	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_19	phrog_541	85.8	4.2e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0159417_19	742740.HMPREF9474_03507	216.0	0	N/A	N/A
PHROG	UHGV-0159417_20	phrog_422	276.5	0	major head protein	head and packaging
UniRef90	UHGV-0159417_20	UniRef90_A0A3R6QST7	567.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0159417_20	663278.Ethha_1589	397.0	0	N/A	N/A
structural_annotation	UHGV-0159417_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_21	phrog_2303	140.7	1.10002e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0159417_21	483218.BACPEC_01156	202.0	0	N/A	N/A
PHROG	UHGV-0159417_22	phrog_581	240.5	0	minor head protein	head and packaging
UniRef90	UHGV-0159417_22	UniRef90_A0A3R6LZD9	1045.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0159417_22	742740.HMPREF9474_03503	502.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0159417_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0159417_22	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0159417_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159417_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_23	phrog_25639	110.8	4.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-0159417_23	742740.HMPREF9474_03502	103.0	3.88e-28	N/A	N/A
PHROG	UHGV-0159417_24	phrog_533	281.4	0	portal protein	head and packaging
UniRef90	UHGV-0159417_24	UniRef90_A0A3R6U7L6	983.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0159417_24	742740.HMPREF9474_03501	766.0	0	N/A	N/A
structural_annotation	UHGV-0159417_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0159417_25	K06909	93.3	3.6e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0159417_25	phrog_2	77.0	3.8e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0159417_25	UniRef90_A0A3R6QNE9	931.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0159417_25	1304866.K413DRAFT_0811	789.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0159417_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0159417_25	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0159417_26	K07474	133.6	2.4e-39	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0159417_26	phrog_51	146.6	1.20512e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0159417_26	UniRef90_A0A3R6M7Q6	301.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0159417_26	1298920.KI911353_gene4857	222.0	0	Terminase small subunit	N/A
Pfam	UHGV-0159417_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0159417_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0159417_26	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_27	phrog_36	56.1	7.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0159417_27	UniRef90_A0A416G5Z3	266.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0159417_27	742740.HMPREF9474_03497	152.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0159417_27	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0159417_28	K00558	215.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0159417_28	phrog_116	257.8	0	DNA methyltransferase	other
UniRef90	UHGV-0159417_28	UniRef90_A0A1C5S2H5	873.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0159417_28	1235800.C819_02255	642.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0159417_28	MTase_II_00020	104.7	5.7e-33	Type II methyltransferase	RM
Pfam	UHGV-0159417_28	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0159417_28	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0159417_28	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0159417_29	K00571	116.1	3.9e-34	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0159417_29	phrog_67	104.8	5.6e-31	DNA methyltransferase	other
UniRef90	UHGV-0159417_29	UniRef90_A0A416G2Y7	518.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0159417_29	658655.HMPREF0988_00878	485.0	0	DNA methylase	N/A
PADLOC	UHGV-0159417_29	MTase_II_00157	97.6	1.6e-28	Type II methyltransferase	RM
Pfam	UHGV-0159417_29	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0159417_29	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0159417_29	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_30	phrog_424	51.9	0.0000000000000066	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0159417_30	693746.OBV_43240	512.0	0	N/A	N/A
COG	UHGV-0159417_30	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0159417_30	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_32	phrog_9804	135.5	3.3e-40	N/A	unknown function
UniRef90	UHGV-0159417_32	UniRef90_G9WTJ5	209.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0159417_32	626523.GCWU000342_01038	177.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0159417_32	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0159417_32	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_33	phrog_19415	64.5	1.4e-18	N/A	unknown function
UniRef90	UHGV-0159417_33	UniRef90_A0A173W7E0	99.0	3.91e-21	N/A	N/A
eggNOG-mapper	UHGV-0159417_33	1399942.U3PDU2_9CAUD	69.3	0.0000000000471	calcium ion binding	N/A
Pfam	UHGV-0159417_33	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0159417_33	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_34	phrog_244	64.2	2.6e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0159417_34	742740.HMPREF9474_03491	141.0	9.39991e-42	N/A	N/A
structural_annotation	UHGV-0159417_34	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_35	phrog_2113	58.7	7.8e-17	N/A	unknown function
PHROG	UHGV-0159417_36	phrog_7566	87.5	8.8e-26	N/A	unknown function
UniRef90	UHGV-0159417_36	UniRef90_A0A3R6TI62	195.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0159417_36	1304866.K413DRAFT_1198	68.2	0.00000000000017	N/A	N/A
PHROG	UHGV-0159417_37	phrog_72	63.7	2.8e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0159417_37	411468.CLOSCI_00314	134.0	3.02e-37	N/A	N/A
structural_annotation	UHGV-0159417_37	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_38	phrog_14970	303.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0159417_38	411470.RUMGNA_02193	234.0	0	double-strand break repair protein	N/A
COG	UHGV-0159417_38	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0159417_38	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0159417_39	1304866.K413DRAFT_3014	55.1	0.00000000116	N/A	N/A
KOfam	UHGV-0159417_44	K07741	46.2	0.0000000000015	antB; anti-repressor protein	N/A
PHROG	UHGV-0159417_44	phrog_463	237.5	0	anti-repressor	transcription regulation
UniRef90	UHGV-0159417_44	UniRef90_UPI0009D68101	368.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0159417_44	1304866.K413DRAFT_1188	233.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0159417_44	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0159417_44	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0159417_44	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0159417_44	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_45	phrog_8	53.2	0.0000000000000069	transcriptional regulator	transcription regulation
UniRef90	UHGV-0159417_45	UniRef90_A0A416G608	130.0	1.02e-38	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0159417_45	1304866.K413DRAFT_0833	88.6	1.17e-22	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0159417_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0159417_45	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0159417_46	K22299	55.0	0.0000000000000019	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0159417_46	phrog_8	68.0	1.7e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0159417_46	UniRef90_UPI001E378795	213.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0159417_46	411460.RUMTOR_02056	204.0	0	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0159417_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0159417_46	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0159417_46	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0159417_47	phrog_87	88.0	7.7e-26	metallo-protease	other
UniRef90	UHGV-0159417_47	UniRef90_A0A417SPF9	286.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0159417_47	411460.RUMTOR_02055	184.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0159417_47	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0159417_47	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0159417_47	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0159417_48	K10421	43.5	0.000000000002	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0159417_48	phrog_1847	513.4	0	N/A	unknown function
UniRef90	UHGV-0159417_48	UniRef90_A0A3R6T339	707.0	0	N/A	N/A
eggNOG-mapper	UHGV-0159417_48	1235792.C808_05258	444.0	0	N/A	N/A
Pfam	UHGV-0159417_48	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-0159417_48	PF10544	N/A	N/A	T5orf172 domain	T5orf172
COG	UHGV-0159417_48	COG0172	N/A	N/A	Seryl-tRNA synthetase	N/A
structural_annotation	UHGV-0159417_48	PF13250,PF19824,MF_01506	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0159417_49	608534.GCWU000341_02323	60.5	0.000000000285	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0159417_49	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
KOfam	UHGV-0159417_50	K14059	145.2	8.1976e-43	int; integrase	N/A
PHROG	UHGV-0159417_50	phrog_1	132.7	3.7e-39	integrase	integration and excision
UniRef90	UHGV-0159417_50	UniRef90_A0A3R6MTQ4	568.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0159417_50	1235793.C809_01886	255.0	0	Phage integrase family	N/A
Pfam	UHGV-0159417_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0159417_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0159417_50	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A