UHGV-0161015 (vOTU-144107)

Viral Genome: UHGV-0161015

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0161015
vOTU ID	vOTU-144107
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_464926
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.08 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9826
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.62
Jumbo phage	No

Genome content
Genome length (bp)	23,531
GC content	50.59%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	96%
Average CDS length (bps)	625.33
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.08)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0161015_1	phrog_3584	168.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0161015_1	1196322.A370_05744	166.0	0	N/A	N/A
structural_annotation	UHGV-0161015_1	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_2	phrog_531	42.1	0.000000000016	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0161015_2	UniRef90_F3AAS5	113.0	2.26e-29	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0161015_2	573065.Astex_1568	56.2	0.0000000594	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0161015_2	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0161015_2	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0161015_2	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0161015_4	K03111	130.6	2e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0161015_4	phrog_44	136.4	2e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0161015_4	UniRef90_A0A7G9G0M5	196.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0161015_4	411459.RUMOBE_00993	189.0	0	N/A	N/A
Pfam	UHGV-0161015_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0161015_4	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0161015_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0161015_4	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0161015_4	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0161015_5	411468.CLOSCI_00555	62.8	0.00000000174	N/A	N/A
PHROG	UHGV-0161015_6	phrog_7566	107.4	6e-32	N/A	unknown function
eggNOG-mapper	UHGV-0161015_6	411459.RUMOBE_00948	129.0	2.92e-37	N/A	N/A
PHROG	UHGV-0161015_7	phrog_15077	59.8	5.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0161015_7	742740.HMPREF9474_03494	80.1	0.00000000000000133	N/A	N/A
PHROG	UHGV-0161015_8	phrog_17690	98.0	6.7e-29	N/A	unknown function
UniRef90	UHGV-0161015_8	UniRef90_A0A6L5XWF4	82.4	1.09e-17	3-dehydroquinate synthase	N/A
eggNOG-mapper	UHGV-0161015_8	33035.JPJF01000107_gene432	94.4	4.08e-23	N/A	N/A
PHROG	UHGV-0161015_9	phrog_15198	43.3	0.0000000000061	N/A	unknown function
UniRef90	UHGV-0161015_9	UniRef90_A0A1H4JD22	53.5	0.000000688	N/A	N/A
UniRef90	UHGV-0161015_10	UniRef90_UPI001594A542	152.0	1.44334e-43	N/A	N/A
eggNOG-mapper	UHGV-0161015_10	742733.HMPREF9469_00921	141.0	4.79999e-40	N/A	N/A
structural_annotation	UHGV-0161015_10	NF041588	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0161015_11	1519439.JPJG01000059_gene1909	63.9	0.00000000000117	N/A	N/A
PHROG	UHGV-0161015_13	phrog_355	85.2	7.1e-25	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0161015_13	UniRef90_A0A3R6XYD6	102.0	5.27e-26	N/A	N/A
eggNOG-mapper	UHGV-0161015_13	521000.PROVRETT_06001	73.9	9.24e-16	N/A	N/A
Pfam	UHGV-0161015_13	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0161015_13	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0161015_13	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_15	phrog_36	89.6	3.7e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-0161015_15	UniRef90_A0A416N3D8	120.0	3.65e-32	N/A	N/A
eggNOG-mapper	UHGV-0161015_15	1123075.AUDP01000020_gene1515	94.7	6.54e-23	sigma factor activity	N/A
Pfam	UHGV-0161015_15	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0161015_15	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0161015_15	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0161015_16	K07339	53.2	0.0000000000000051	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-0161015_16	phrog_353	84.5	7.3e-25	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0161015_16	UniRef90_A0A851I9X0	94.4	2.75e-24	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-0161015_16	397287.C807_02050	81.6	4.89e-20	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0161015_16	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-0161015_16	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-0161015_16	PF07927,COG1724	N/A	N/A	N/A	N/A
KOfam	UHGV-0161015_17	K18843	71.5	1.7e-20	hicB; antitoxin HicB	N/A
PHROG	UHGV-0161015_17	phrog_497	84.9	1.3e-24	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0161015_17	UniRef90_A0A143XPN7	234.0	0	HicB-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0161015_17	397287.C807_02051	169.0	0	HicB_like antitoxin of bacterial toxin-antitoxin system	N/A
Pfam	UHGV-0161015_17	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0161015_17	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0161015_17	PF15919,COG1598	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_18	phrog_21498	282.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0161015_18	78346.BRUM_0376	243.0	0	DNA binding	N/A
COG	UHGV-0161015_18	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0161015_18	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_19	phrog_4502	59.9	6.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0161015_19	768486.EHR_02665	55.8	0.0000000386	N/A	N/A
structural_annotation	UHGV-0161015_19	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_20	phrog_144	81.7	8.9e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0161015_20	UniRef90_A0A829NTQ4	186.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0161015_20	411459.RUMOBE_00940	184.0	0	HNH endonuclease	N/A
Pfam	UHGV-0161015_20	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0161015_20	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0161015_20	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_21	phrog_83	76.6	2.5e-22	terminase small subunit	head and packaging
UniRef90	UHGV-0161015_21	UniRef90_A5ZPM2	140.0	9.47999e-40	Phage terminase, small subunit, P27 family	N/A
eggNOG-mapper	UHGV-0161015_21	411459.RUMOBE_00939	140.0	1.59e-40	Phage terminase, small subunit	N/A
Pfam	UHGV-0161015_21	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0161015_21	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0161015_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_22	phrog_9	371.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0161015_22	UniRef90_UPI000E4C9919	961.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0161015_22	97139.C824_05973	963.0	0	Terminase	N/A
Pfam	UHGV-0161015_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0161015_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0161015_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0161015_22	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_23	phrog_12	296.9	0	portal protein	head and packaging
UniRef90	UHGV-0161015_23	UniRef90_A0A7G9G8P4	659.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0161015_23	411459.RUMOBE_00937	653.0	0	N/A	N/A
Pfam	UHGV-0161015_23	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0161015_23	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0161015_23	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0161015_23	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0161015_24	K01358	132.6	4.3e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0161015_24	phrog_94	191.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0161015_24	UniRef90_A5ZPL9	342.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0161015_24	411459.RUMOBE_00936	342.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0161015_24	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0161015_24	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0161015_24	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_25	phrog_10	193.9	0	major head protein	head and packaging
UniRef90	UHGV-0161015_25	UniRef90_A0A1C6IV65	517.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0161015_25	1235792.C808_03063	452.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0161015_25	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0161015_25	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0161015_25	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0161015_25	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_26	phrog_5223	79.1	3.7e-23	neck protein	connector
eggNOG-mapper	UHGV-0161015_26	1235792.C808_03062	112.0	3.53e-31	N/A	N/A
structural_annotation	UHGV-0161015_26	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_27	phrog_1951	52.3	0.0000000000000095	head-tail adaptor	connector
UniRef90	UHGV-0161015_27	UniRef90_A5ZPL6	120.0	2.65e-33	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0161015_27	411459.RUMOBE_00933	120.0	4.45e-34	N/A	N/A
structural_annotation	UHGV-0161015_27	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_28	phrog_5	65.0	1.9e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0161015_28	UniRef90_A5ZPL5	153.0	1.4013e-45	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0161015_28	411459.RUMOBE_00932	153.0	0	Phage protein, HK97 gp10 family	N/A
Pfam	UHGV-0161015_28	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0161015_28	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0161015_28	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0161015_29	UniRef90_A0A7G9G8N8	147.0	1.16308e-43	Phage tail protein	N/A
eggNOG-mapper	UHGV-0161015_29	97139.C824_05966	135.0	9.94e-40	N/A	N/A
structural_annotation	UHGV-0161015_29	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_30	phrog_88	105.7	4.9e-31	major tail protein	tail
UniRef90	UHGV-0161015_30	UniRef90_A0A7G9G8N6	220.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0161015_30	1123075.AUDP01000020_gene1518	216.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0161015_30	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0161015_30	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0161015_30	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0161015_31	1123075.AUDP01000020_gene1519	134.0	1.74e-38	N/A	N/A
structural_annotation	UHGV-0161015_31	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-0161015_33	K20283	59.9	4.3e-18	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0161015_33	phrog_5218	115.1	0	N/A	unknown function
UniRef90	UHGV-0161015_33	UniRef90_A5ZPK9	633.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-0161015_33	411459.RUMOBE_00926	633.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0161015_33	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0161015_33	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0161015_33	PF10145,PF05384,NF033930,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_34	phrog_33	77.7	2.5e-22	distal tail protein Dit	tail
UniRef90	UHGV-0161015_34	UniRef90_A0A373JCA8	244.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0161015_34	1499683.CCFF01000017_gene2564	208.0	0	Phage tail protein	N/A
COG	UHGV-0161015_34	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0161015_34	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0161015_35	K22299	53.1	0.0000000000000077	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0161015_35	UniRef90_UPI001C116A0F	170.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0161015_35	997296.PB1_16114	109.0	2.97e-29	Protein conserved in bacteria	N/A
Pfam	UHGV-0161015_35	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0161015_35	COG1426	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0161015_35	PF13560,MF_00535,NF041951,COG1513	N/A	N/A	N/A	N/A
PHROG	UHGV-0161015_36	phrog_1914	44.0	0.0000000000031	N/A	unknown function
UniRef90	UHGV-0161015_36	UniRef90_UPI001C10636F	230.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0161015_36	573.JG24_17540	140.0	4.87e-40	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0161015_36	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0161015_36	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0161015_36	PF06114,MF_00745,COG2856	N/A	N/A	N/A	N/A