UHGV-0161213 (vOTU-150512)

Viral Genome: UHGV-0161213

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0161213
vOTU ID	vOTU-150512
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_471763
Associated BioSample	SAMN06111959
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.12 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9799
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	11.68
Jumbo phage	No

Genome content
Genome length (bp)	28,011
GC content	54.48%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	92%
Average CDS length (bps)	506.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0161213_1	phrog_23092	158.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0161213_1	1226322.HMPREF1545_02799	145.0	9.10844e-44	N/A	N/A
PHROG	UHGV-0161213_2	phrog_13256	74.8	6.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0161213_2	1226322.HMPREF1545_00132	88.6	2.64e-22	N/A	N/A
PHROG	UHGV-0161213_3	phrog_21825	114.1	1.4e-33	endolysin	lysis
UniRef90	UHGV-0161213_3	UniRef90_A0A1C5WDQ0	426.0	0	CHAP domain	N/A
eggNOG-mapper	UHGV-0161213_3	693746.OBV_18290	206.0	0	CHAP domain	N/A
Pfam	UHGV-0161213_3	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0161213_3	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
UniRef90	UHGV-0161213_4	UniRef90_U2R3E6	63.2	0.0000000000193	KORA domain-containing protein	N/A
structural_annotation	UHGV-0161213_4	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_5	phrog_1281	115.7	2.9e-34	N/A	unknown function
UniRef90	UHGV-0161213_5	UniRef90_A0A0W7TLZ5	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-0161213_5	1235798.C817_03619	213.0	0	N/A	N/A
Pfam	UHGV-0161213_5	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0161213_5	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0161213_5	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_7	phrog_3754	87.0	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0161213_7	1226322.HMPREF1545_00073	154.0	0	N/A	N/A
PHROG	UHGV-0161213_8	phrog_21718	119.0	3.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-0161213_8	397290.C810_05210	73.9	0.0000000000000219	N/A	N/A
PHROG	UHGV-0161213_9	phrog_22984	129.4	9.5e-39	N/A	unknown function
PHROG	UHGV-0161213_10	phrog_16490	318.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0161213_10	1226322.HMPREF1545_00076	238.0	0	N/A	N/A
PHROG	UHGV-0161213_11	phrog_20016	194.0	0	N/A	unknown function
UniRef90	UHGV-0161213_11	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0161213_11	1226322.HMPREF1545_00077	171.0	0	N/A	N/A
structural_annotation	UHGV-0161213_11	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0161213_13	693746.OBV_01600	233.0	0	N/A	N/A
UniRef90	UHGV-0161213_14	UniRef90_A0A810QFN4	478.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0161213_14	1519439.JPJG01000011_gene53	962.0	0	N/A	N/A
PHROG	UHGV-0161213_15	phrog_1726	177.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-0161213_15	UniRef90_A0A4D7AT73	399.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0161213_15	1444309.JAQG01000145_gene2705	128.0	1.43e-33	Phage regulatory protein	N/A
Pfam	UHGV-0161213_15	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0161213_15	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0161213_15	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0161213_15	PF09669,PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-0161213_17	UniRef90_A0A1C5WAG7	123.0	1.8e-35	Restriction alleviation protein, Lar family	N/A
PHROG	UHGV-0161213_18	phrog_7711	150.6	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-0161213_18	1226322.HMPREF1545_00031	241.0	0	N/A	N/A
PHROG	UHGV-0161213_19	phrog_38832	181.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0161213_19	665956.HMPREF1032_03087	105.0	7.67e-27	N/A	N/A
PHROG	UHGV-0161213_24	phrog_25732	46.7	0.00000000000022	N/A	unknown function
PHROG	UHGV-0161213_25	phrog_7704	42.0	0.000000000019	N/A	unknown function
UniRef90	UHGV-0161213_25	UniRef90_U2R3A7	122.0	1.13e-33	N/A	N/A
Pfam	UHGV-0161213_25	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0161213_25	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_27	phrog_36365	122.8	9.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-0161213_27	476272.RUMHYD_01925	57.0	0.000000000405	N/A	N/A
PHROG	UHGV-0161213_28	phrog_10714	48.5	0.00000000000015	N/A	unknown function
UniRef90	UHGV-0161213_28	UniRef90_UPI001C3A10B1	84.7	6.68e-19	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0161213_28	742738.HMPREF9460_04055	54.7	0.0000000385	N/A	N/A
Pfam	UHGV-0161213_28	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0161213_30	phrog_599	41.2	0.000000000034	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0161213_30	UniRef90_UPI0018AC14ED	106.0	2.74e-28	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-0161213_30	742738.HMPREF9460_04054	74.3	4.26e-16	Restriction alleviation protein Lar	N/A
structural_annotation	UHGV-0161213_30	PF14354,NF007260	N/A	N/A	N/A	N/A
UniRef90	UHGV-0161213_31	UniRef90_A0A4D7ATA9	214.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0161213_31	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0161213_31	PF04936,NF033558	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_32	phrog_244	65.9	9.2e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0161213_32	UniRef90_A0A841R0Q1	157.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0161213_32	1123250.KB908417_gene653	137.0	1.32e-40	N/A	N/A
structural_annotation	UHGV-0161213_32	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_33	phrog_15768	149.2	1.4013e-44	N/A	unknown function
UniRef90	UHGV-0161213_33	UniRef90_A0A4D7AS84	260.0	0	N/A	N/A
eggNOG-mapper	UHGV-0161213_33	203119.Cthe_2466	93.2	1.3e-19	N/A	N/A
AcrCatalog	UHGV-0161213_33	cluster_38323	110.0	1.44e-31	NA	N/A
Pfam	UHGV-0161213_33	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0161213_33	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0161213_34	K03111	44.5	0.0000000000037	ssb; single-strand DNA-binding protein	N/A
UniRef90	UHGV-0161213_34	UniRef90_A0A4D7AYE9	270.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0161213_34	693746.OBV_12860	52.8	0.00000106	Single-strand binding protein family	N/A
Pfam	UHGV-0161213_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0161213_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0161213_34	PF00436,MF_00984,NF006297,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_35	phrog_10048	50.6	2.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0161213_35	1304880.JAGB01000002_gene2238	103.0	4.76e-24	N/A	N/A
structural_annotation	UHGV-0161213_35	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_36	phrog_298	73.4	2.5e-22	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0161213_36	UniRef90_UPI00058C5410	97.1	9.14e-22	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-0161213_36	1445613.JALM01000017_gene5894	73.2	0.000000000000454	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-0161213_36	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0161213_36	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
COG	UHGV-0161213_38	COG0145	N/A	N/A	N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit	N/A
structural_annotation	UHGV-0161213_38	PF01381,PF13613,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0161213_39	phrog_22529	88.9	4e-26	N/A	unknown function
UniRef90	UHGV-0161213_39	UniRef90_A0A7T7IG06	231.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0161213_39	1226322.HMPREF1545_00012	205.0	0	3D domain	N/A
Pfam	UHGV-0161213_39	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0161213_39	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0161213_39	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
KOfam	UHGV-0161213_40	K21919	77.5	1.6e-22	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-0161213_40	phrog_9562	137.6	2.59997e-41	N/A	unknown function
UniRef90	UHGV-0161213_40	UniRef90_A0A1C5W9L2	279.0	0	Type III effector pipB2	N/A
eggNOG-mapper	UHGV-0161213_40	1226322.HMPREF1545_00011	255.0	0	Pentapeptide repeats (8 copies)	N/A
Pfam	UHGV-0161213_40	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-0161213_40	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-0161213_40	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0161213_40	PF19062,PF13599,NF011744,COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0161213_41	PF06003,COG5475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0161213_43	PF12728	N/A	N/A	N/A	N/A
UniRef90	UHGV-0161213_47	UniRef90_UPI000E31DAF9	91.3	8.59e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0161213_47	445974.CLORAM_02965	87.0	6.49e-22	N/A	N/A
structural_annotation	UHGV-0161213_47	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0161213_48	K01356	143.4	2.7003e-42	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0161213_48	phrog_4	112.5	4.9e-33	transcriptional repressor	transcription regulation
UniRef90	UHGV-0161213_48	UniRef90_R6N9Z1	221.0	0	SOS-response transcriptional repressors (RecA-mediated autopeptidases)	N/A
eggNOG-mapper	UHGV-0161213_48	1121423.JONT01000002_gene2372	169.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0161213_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0161213_48	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0161213_48	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0161213_48	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
KOfam	UHGV-0161213_50	K14059	191.6	0	int; integrase	N/A
PHROG	UHGV-0161213_50	phrog_1	181.9	0	integrase	integration and excision
UniRef90	UHGV-0161213_50	UniRef90_A0A4D7AYG4	684.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0161213_50	693746.OBV_01970	396.0	0	Phage integrase family	N/A
Pfam	UHGV-0161213_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0161213_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0161213_50	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0161213_51	1226322.HMPREF1545_02362	537.0	0	N/A	N/A