UHGV-0169598 (vOTU-168110)

Viral Genome: UHGV-0169598

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0169598
vOTU ID	vOTU-168110
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_501140
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	70.79 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	34.26
Jumbo phage	No

Genome content
Genome length (bp)	29,338
GC content	52.11%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	59
CDS density	91%
Average CDS length (bps)	452.85
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0169598_2	phrog_4433	73.3	5.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0169598_2	445970.ALIPUT_01592	102.0	2.76e-22	DNA-templated transcription, initiation	N/A
COG	UHGV-0169598_2	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
KOfam	UHGV-0169598_3	K00390	91.0	8.6e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0169598_3	phrog_424	123.4	5.6e-37	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0169598_3	UniRef90_A0A1Y4LU27	376.0	0	Adenylyl-sulfate reductase	N/A
eggNOG-mapper	UHGV-0169598_3	1408437.JNJN01000032_gene2312	347.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0169598_3	BrxP_00001	64.0	2e-19	BrxP	BREX
Pfam	UHGV-0169598_3	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0169598_3	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0169598_3	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_5	phrog_20437	158.8	0	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169598_5	UniRef90_A0A3A6E2X3	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-0169598_5	445971.ANASTE_00700	159.0	1.4013e-44	N/A	N/A
Pfam	UHGV-0169598_5	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0169598_5	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0169598_5	PF14297	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_7	phrog_4973	71.1	1.4e-20	N/A	unknown function
UniRef90	UHGV-0169598_7	UniRef90_A0A3D3Y0P8	98.6	1.64e-25	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0169598_7	1072685.IX83_07155	53.9	0.00000000878	Helix-turn-helix domain	N/A
Pfam	UHGV-0169598_7	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0169598_7	PF14090,TIGR00373,COG4738	N/A	N/A	N/A	N/A
KOfam	UHGV-0169598_8	K01160	59.9	7.6e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0169598_8	phrog_140	129.3	2.2e-38	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169598_8	UniRef90_A0A7G9WF80	133.0	2.44e-37	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0169598_8	1123263.AUKY01000072_gene2102	123.0	4.28e-34	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0169598_8	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0169598_8	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0169598_8	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0169598_9	K03111	113.1	4.2e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0169598_9	phrog_44	125.1	5.5e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169598_9	UniRef90_UPI001958E09C	120.0	5.05e-32	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0169598_9	1519439.JPJG01000082_gene432	119.0	1.7e-32	Single-strand binding protein family	N/A
Pfam	UHGV-0169598_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0169598_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0169598_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0169598_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0169598_9	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169598_10	UniRef90_UPI001D05CADB	117.0	5.06e-32	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0169598_10	445972.ANACOL_01826	88.6	1.5e-21	HNH nucleases	N/A
Pfam	UHGV-0169598_10	PF13391	N/A	N/A	HNH endonuclease	HNH_2
PHROG	UHGV-0169598_11	phrog_72	52.7	0.0000000000000042	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0169598_11	UniRef90_A0A2Z4Q9W9	152.0	9.94922e-44	NinB	N/A
eggNOG-mapper	UHGV-0169598_11	445972.ANACOL_01825	151.0	3.50325e-44	N/A	N/A
structural_annotation	UHGV-0169598_11	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_12	phrog_14970	184.1	0	N/A	unknown function
UniRef90	UHGV-0169598_12	UniRef90_UPI00164BFA28	168.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0169598_12	411470.RUMGNA_02193	143.0	4.74003e-41	double-strand break repair protein	N/A
Pfam	UHGV-0169598_12	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0169598_12	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0169598_12	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_18	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0169598_19	596152.DesU5LDRAFT_1910	99.0	5.45e-23	N/A	N/A
structural_annotation	UHGV-0169598_19	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_20	PF20432,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169598_22	UniRef90_A0A8D9PDN2	89.7	3.53e-22	DNA-binding protein	N/A
Pfam	UHGV-0169598_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0169598_22	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_23	phrog_3773	47.8	0.00000000000029	N/A	unknown function
structural_annotation	UHGV-0169598_23	PF01423,MF_00257,NF041667	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169598_25	UniRef90_A0A847VYD9	94.7	3.7e-24	N/A	N/A
eggNOG-mapper	UHGV-0169598_25	171693.BN988_01635	89.4	8.93e-23	N/A	N/A
Pfam	UHGV-0169598_25	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0169598_25	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0169598_25	PF05339,NF002773,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0169598_26	K22300	44.9	0.0000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0169598_26	phrog_2967	45.4	0.0000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0169598_26	UniRef90_A0A7G9WF64	134.0	5.56e-38	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0169598_26	457412.RSAG_00795	117.0	6.82e-32	sequence-specific DNA binding	N/A
COG	UHGV-0169598_26	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0169598_26	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_27	PF09202,MF_01177,TIGR02702,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-0169598_30	UniRef90_A0A373NUR9	168.0	0	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0169598_30	1348338.ADILRU_1827	54.7	0.000000779	N/A	N/A
Pfam	UHGV-0169598_30	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
KOfam	UHGV-0169598_31	K23779	49.4	0.0000000000001	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
Pfam	UHGV-0169598_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0169598_31	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_32	phrog_33519	120.9	7.7e-36	N/A	unknown function
eggNOG-mapper	UHGV-0169598_32	1507.HMPREF0262_01197	120.0	9.03e-33	N/A	N/A
structural_annotation	UHGV-0169598_32	PF13958,NF010262,COG2337	N/A	N/A	N/A	N/A
KOfam	UHGV-0169598_33	K14059	144.9	1.00053e-42	int; integrase	N/A
PHROG	UHGV-0169598_33	phrog_1	144.4	9.59889e-43	integrase	integration and excision
UniRef90	UHGV-0169598_33	UniRef90_A0A3D2HVQ9	372.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0169598_33	1121344.JHZO01000004_gene1696	94.0	3.21e-19	Phage integrase family	N/A
Pfam	UHGV-0169598_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0169598_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0169598_33	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_35	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_36	phrog_20016	172.4	0	N/A	unknown function
UniRef90	UHGV-0169598_36	UniRef90_A0A345BPX4	159.0	0	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0169598_36	1226322.HMPREF1545_00077	142.0	1.76998e-41	N/A	N/A
structural_annotation	UHGV-0169598_36	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_37	phrog_16490	155.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0169598_37	1408437.JNJN01000043_gene803	98.2	9.14e-22	N/A	N/A
PHROG	UHGV-0169598_38	phrog_22984	68.4	9.3e-20	N/A	unknown function
PHROG	UHGV-0169598_39	phrog_21718	49.3	0.000000000000057	N/A	unknown function
UniRef90	UHGV-0169598_39	UniRef90_A0A285PT36	80.1	3.4e-16	Consensus disorder prediction	N/A
PHROG	UHGV-0169598_40	phrog_3754	98.1	9.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0169598_40	476272.RUMHYD_01764	141.0	1.04004e-41	N/A	N/A
structural_annotation	UHGV-0169598_41	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_42	phrog_10091	102.1	4.3e-30	holin	lysis
UniRef90	UHGV-0169598_42	UniRef90_D7GNX3	132.0	1.27e-38	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0169598_42	97139.C824_05950	119.0	4.13e-34	Bacteriophage holin	N/A
Pfam	UHGV-0169598_42	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0169598_42	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0169598_42	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_42	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_43	phrog_774	68.8	1.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0169598_43	397290.C810_05225	87.4	1.92e-21	N/A	N/A
PHROG	UHGV-0169598_44	phrog_937	58.9	1e-16	hemolysin	other
eggNOG-mapper	UHGV-0169598_44	1297617.JPJD01000099_gene2176	48.5	0.0000055	N/A	N/A
KOfam	UHGV-0169598_45	K08640	97.1	3.1e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0169598_45	phrog_894	61.4	1.5e-17	endolysin	lysis
UniRef90	UHGV-0169598_45	UniRef90_R5EEL2	302.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0169598_45	931626.Awo_c26840	111.0	3.6e-28	Peptidase M15	N/A
Pfam	UHGV-0169598_45	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0169598_45	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0169598_45	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_45	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_49	PF14686,PF07210,PF21582,TIGR03000,TIGR04183,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_50	phrog_9534	118.9	6.4e-35	head protein	head and packaging
eggNOG-mapper	UHGV-0169598_50	748224.HMPREF9436_00702	84.3	0.00000000000000122	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0169598_51	phrog_538	126.6	2.2e-37	minor tail protein	tail
UniRef90	UHGV-0169598_51	UniRef90_UPI001C113FEF	333.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0169598_51	768704.Desmer_4453	67.4	0.0000000012	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0169598_51	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0169598_51	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_52	phrog_33	62.3	1.1e-17	distal tail protein Dit	tail
UniRef90	UHGV-0169598_52	UniRef90_UPI001C0FCFFA	456.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0169598_52	536232.CLM_2045	119.0	3.28e-29	Phage tail protein	N/A
COG	UHGV-0169598_52	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0169598_52	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_53	phrog_6900	110.4	2.8e-32	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0169598_53	1111121.HMPREF1247_0787	196.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0169598_53	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0169598_53	PF20155,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_55	phrog_18646	71.0	1.7e-20	N/A	unknown function
UniRef90	UHGV-0169598_55	UniRef90_B6CXF0	86.3	2.05e-19	Peptidase-colicin	N/A
PHROG	UHGV-0169598_56	phrog_885	69.7	3.5e-20	major tail protein	tail
UniRef90	UHGV-0169598_56	UniRef90_A0A843J9F0	194.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0169598_56	1504822.CCNO01000012_gene492	212.0	0	N/A	N/A
structural_annotation	UHGV-0169598_56	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0169598_57	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0169598_58	phrog_17977	78.8	5.2e-23	N/A	unknown function
UniRef90	UHGV-0169598_58	UniRef90_A0A285PT57	139.0	1.31e-40	Phage head-tail joining protein	N/A
Pfam	UHGV-0169598_58	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0169598_58	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A