UHGV-0171625 (vOTU-028537)

Viral Genome: UHGV-0171625

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0171625
vOTU ID	vOTU-028537
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_585285
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	57.33 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9827
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.6
Jumbo phage	No

Genome content
Genome length (bp)	25,359
GC content	44.54%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	36
CDS density	94%
Average CDS length (bps)	664.17
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 57.33)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0171625_1	phrog_606	89.7	3.4e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0171625_1	UniRef90_UPI00195648BB	171.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0171625_1	397290.C810_05185	179.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0171625_1	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0171625_1	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0171625_2	K06909	327.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0171625_2	phrog_3717	157.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0171625_2	UniRef90_A0A395X9V4	792.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0171625_2	33035.JPJF01000106_gene3136	414.0	0	Terminase small subunit	N/A
Pfam	UHGV-0171625_2	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0171625_2	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0171625_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0171625_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0171625_2	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_3	phrog_533	280.5	0	portal protein	head and packaging
UniRef90	UHGV-0171625_3	UniRef90_A0A1C6CDM8	694.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0171625_3	33035.JPJF01000106_gene3135	526.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0171625_3	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_4	phrog_14030	165.5	0	N/A	unknown function
UniRef90	UHGV-0171625_4	UniRef90_UPI001F3A7341	290.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0171625_4	742741.HMPREF9475_00446	239.0	0	N/A	N/A
PHROG	UHGV-0171625_5	phrog_581	265.9	0	minor head protein	head and packaging
UniRef90	UHGV-0171625_5	UniRef90_A0A1C6CDG2	589.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0171625_5	33035.JPJF01000106_gene3134	451.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0171625_5	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0171625_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171625_5	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171625_6	UniRef90_A0A417UWY7	127.0	4.48e-36	CTP synthase	N/A
eggNOG-mapper	UHGV-0171625_6	476272.RUMHYD_01766	62.4	0.0000000000335	N/A	N/A
UniRef90	UHGV-0171625_7	UniRef90_A0A843HPX3	73.6	6.8e-16	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0171625_7	1235790.C805_00057	57.4	0.000000000291	N/A	N/A
Pfam	UHGV-0171625_7	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0171625_7	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_8	phrog_21718	70.7	2.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0171625_8	1235790.C805_00058	101.0	6.4e-25	N/A	N/A
PHROG	UHGV-0171625_10	phrog_9288	43.8	0.0000000000046	N/A	unknown function
eggNOG-mapper	UHGV-0171625_10	476272.RUMHYD_01770	71.6	0.00000000000233	N/A	N/A
PHROG	UHGV-0171625_11	phrog_20016	66.5	3.4e-19	N/A	unknown function
UniRef90	UHGV-0171625_11	UniRef90_A0A316MV88	210.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0171625_11	1226322.HMPREF1545_00077	72.0	0.0000000000000457	N/A	N/A
structural_annotation	UHGV-0171625_11	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171625_12	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171625_14	UniRef90_UPI001C0EBA51	264.0	0	phage scaffolding protein	N/A
PHROG	UHGV-0171625_15	phrog_247	267.4	0	major head protein	head and packaging
UniRef90	UHGV-0171625_15	UniRef90_A0A3R6K7E9	676.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-0171625_15	536233.CLO_0886	399.0	0	N/A	N/A
COG	UHGV-0171625_15	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0171625_15	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_16	phrog_541	86.8	1e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0171625_16	476272.RUMHYD_01778	125.0	1.36e-34	N/A	N/A
PHROG	UHGV-0171625_17	phrog_1233	98.0	1.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0171625_17	476272.RUMHYD_01960	105.0	6.04e-28	N/A	N/A
Pfam	UHGV-0171625_17	PF11350	N/A	N/A	N/A	DUF3152
PHROG	UHGV-0171625_18	phrog_18218	137.7	3.09995e-41	N/A	unknown function
UniRef90	UHGV-0171625_18	UniRef90_A0A8D9PGR5	149.0	8.40779e-45	Holin	N/A
eggNOG-mapper	UHGV-0171625_18	411902.CLOBOL_03424	80.5	3.59e-18	N/A	N/A
structural_annotation	UHGV-0171625_18	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_20	phrog_8680	233.9	0	N/A	unknown function
UniRef90	UHGV-0171625_20	UniRef90_A0A412EKN2	410.0	0	N/A	N/A
eggNOG-mapper	UHGV-0171625_20	411470.RUMGNA_02208	298.0	0	N/A	N/A
Pfam	UHGV-0171625_20	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0171625_20	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_22	phrog_3366	105.1	5.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0171625_22	476272.RUMHYD_01779	149.0	5.60519e-44	N/A	N/A
structural_annotation	UHGV-0171625_22	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_24	phrog_556	65.5	5.6e-19	minor head protein	head and packaging
UniRef90	UHGV-0171625_24	UniRef90_UPI000E4989EB	220.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0171625_24	476272.RUMHYD_01780	178.0	0	N/A	N/A
Pfam	UHGV-0171625_24	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0171625_24	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_25	phrog_3266	92.7	3.1e-27	tail completion	connector
eggNOG-mapper	UHGV-0171625_25	476272.RUMHYD_01781	147.0	1.02015e-42	N/A	N/A
structural_annotation	UHGV-0171625_25	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_26	phrog_3099	117.9	7.9e-35	N/A	unknown function
eggNOG-mapper	UHGV-0171625_26	476272.RUMHYD_01782	149.0	1.23314e-43	N/A	N/A
structural_annotation	UHGV-0171625_26	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_27	phrog_11299	110.8	1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0171625_27	411459.RUMOBE_01382	105.0	3.39e-27	N/A	N/A
structural_annotation	UHGV-0171625_27	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_28	phrog_706	140.0	1.49995e-41	N/A	unknown function
UniRef90	UHGV-0171625_28	UniRef90_UPI00192502EA	197.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0171625_28	411902.CLOBOL_00127	188.0	0	N/A	N/A
Pfam	UHGV-0171625_28	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0171625_28	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_29	phrog_37543	728.4	0	N/A	unknown function
UniRef90	UHGV-0171625_29	UniRef90_UPI001DBC5439	278.0	0	PspA/IM30 family protein	N/A
eggNOG-mapper	UHGV-0171625_29	411459.RUMOBE_01384	217.0	0	phage tail tape measure protein	N/A
COG	UHGV-0171625_29	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0171625_30	phrog_1194	60.8	2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0171625_30	411902.CLOBOL_00125	129.0	1.32e-36	N/A	N/A
structural_annotation	UHGV-0171625_30	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_31	phrog_32744	171.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0171625_31	411902.CLOBOL_00124	454.0	0	N/A	N/A
structural_annotation	UHGV-0171625_31	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0171625_32	phrog_18725	54.7	0.0000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0171625_32	411902.CLOBOL_00123	124.0	2.41e-34	N/A	N/A
eggNOG-mapper	UHGV-0171625_33	411902.CLOBOL_00122	120.0	1.01e-32	N/A	N/A
COG	UHGV-0171625_34	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
eggNOG-mapper	UHGV-0171625_35	1298920.KI911353_gene541	58.2	0.000000351	ATPase involved in DNA repair	N/A
COG	UHGV-0171625_35	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0171625_35	PF03425,NF033675	N/A	N/A	N/A	N/A