UHGV-0171806 (vOTU-010858)

Viral Genome: UHGV-0171806

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0171806
vOTU ID	vOTU-010858
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_583720
Associated BioSample	SAMN09781759
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	99.38 (High-quality)
Trimmed provirus	No
CheckV viral markers	15
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9807
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.19
Jumbo phage	No

Genome content
Genome length (bp)	43,073
GC content	50.15%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	93%
Average CDS length (bps)	638.24
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.38)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0171806_1	phrog_4433	75.2	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0171806_1	445970.ALIPUT_01221	100.0	3.94e-23	DNA-templated transcription, initiation	N/A
COG	UHGV-0171806_1	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
PHROG	UHGV-0171806_2	phrog_16304	63.7	3e-18	N/A	unknown function
UniRef90	UHGV-0171806_2	UniRef90_UPI001E560709	97.1	8.02e-21	N/A	N/A
eggNOG-mapper	UHGV-0171806_2	1345695.CLSA_c35700	56.6	0.00000226	DnaD domain protein	N/A
Pfam	UHGV-0171806_2	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0171806_2	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0171806_2	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0171806_3	K03111	133.9	1.9e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0171806_3	phrog_44	140.2	1.19993e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171806_3	UniRef90_R6IDK3	212.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0171806_3	1007096.BAGW01000023_gene151	177.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0171806_3	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0171806_3	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0171806_3	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0171806_3	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0171806_3	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_4	phrog_7566	90.0	1.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-0171806_4	508419.F8J187_9CAUD	100.0	1.53e-26	N/A	N/A
PHROG	UHGV-0171806_5	phrog_72	46.9	0.00000000000022	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171806_5	UniRef90_A0A2Z4Q9W9	107.0	2.35e-26	NinB	N/A
eggNOG-mapper	UHGV-0171806_5	445972.ANACOL_01825	78.2	8.39e-16	N/A	N/A
structural_annotation	UHGV-0171806_5	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_6	phrog_155	79.8	4.1e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171806_6	UniRef90_UPI0018AC33A4	192.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0171806_6	1497679.EP56_08440	77.8	0.0000000000000119	ERF superfamily	N/A
Pfam	UHGV-0171806_6	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0171806_6	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_7	phrog_253	93.4	2.6e-27	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0171806_7	UniRef90_UPI001030DCF8	86.3	2.84e-18	siphovirus Gp157 family protein	N/A
Pfam	UHGV-0171806_7	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0171806_7	PF05565	N/A	N/A	N/A	N/A
Pfam	UHGV-0171806_9	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0171806_9	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171806_10	UniRef90_UPI0018995761	69.3	0.0000000000000405	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0171806_10	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0171806_10	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0171806_12	K22300	52.6	0.00000000000001	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0171806_12	phrog_8	47.9	0.00000000000034	transcriptional regulator	transcription regulation
UniRef90	UHGV-0171806_12	UniRef90_A0A810PZI0	73.9	6.26e-16	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0171806_12	1226325.HMPREF1548_02445	60.8	0.000000000542	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0171806_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0171806_12	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0171806_12	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171806_13	UniRef90_UPI00189845EC	61.6	0.00000000271	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0171806_13	1378168.N510_01712	57.0	0.000000138	N/A	N/A
Pfam	UHGV-0171806_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-0171806_16	UniRef90_A0A8D9PDV2	55.8	0.0000000137	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-0171806_16	1392493.JIAB01000001_gene1404	62.4	0.00000000011	repeat protein	N/A
COG	UHGV-0171806_16	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
eggNOG-mapper	UHGV-0171806_19	1382304.JNIL01000001_gene3508	50.1	0.00000735	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0171806_19	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-0171806_19	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0171806_20	K14059	151.8	7.00649e-45	int; integrase	N/A
PHROG	UHGV-0171806_20	phrog_1	154.1	1.4013e-45	integrase	integration and excision
UniRef90	UHGV-0171806_20	UniRef90_R6I1Y0	355.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0171806_20	1384066.JAGT01000001_gene153	110.0	4.9e-25	Phage integrase family	N/A
Pfam	UHGV-0171806_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0171806_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0171806_20	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171806_21	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_22	phrog_20016	190.4	0	N/A	unknown function
UniRef90	UHGV-0171806_22	UniRef90_A0A285PT46	201.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0171806_22	1226322.HMPREF1545_00077	166.0	0	N/A	N/A
structural_annotation	UHGV-0171806_22	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_24	phrog_16490	152.2	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-0171806_24	1408437.JNJN01000043_gene803	141.0	1.38e-38	N/A	N/A
PHROG	UHGV-0171806_25	phrog_22984	76.8	2.4e-22	N/A	unknown function
PHROG	UHGV-0171806_26	phrog_21718	93.0	3.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0171806_26	397290.C810_05210	94.4	1.09e-22	N/A	N/A
PHROG	UHGV-0171806_27	phrog_3754	99.9	2.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-0171806_27	476272.RUMHYD_01764	146.0	7.42688e-44	N/A	N/A
structural_annotation	UHGV-0171806_28	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_29	phrog_10091	110.7	9.6e-33	holin	lysis
UniRef90	UHGV-0171806_29	UniRef90_A0A1Y4RHF4	130.0	7.54e-38	Phage holin	N/A
eggNOG-mapper	UHGV-0171806_29	445975.COLSTE_02144	114.0	2.25e-32	Bacteriophage holin	N/A
Pfam	UHGV-0171806_29	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0171806_29	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0171806_29	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171806_29	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_30	phrog_1863	67.1	1.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0171806_30	748224.HMPREF9436_01412	90.9	3.57e-23	N/A	N/A
PHROG	UHGV-0171806_31	phrog_21357	54.3	0.0000000000000015	endolysin	lysis
UniRef90	UHGV-0171806_31	UniRef90_UPI001BB47323	88.6	9.11e-18	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0171806_31	693746.OBV_22650	75.1	0.000000000000178	CHAP domain	N/A
Pfam	UHGV-0171806_31	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0171806_31	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0171806_31	TIGR02594,COG3738	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171806_32	UniRef90_R6I1X1	191.0	0	COPII coat assembly protein SEC16 (Protein transport protein SEC16)	N/A
eggNOG-mapper	UHGV-0171806_32	552398.HMPREF0866_01159	107.0	1.34e-27	N/A	N/A
PHROG	UHGV-0171806_34	phrog_37900	238.5	0	N/A	unknown function
UniRef90	UHGV-0171806_34	UniRef90_UPI00110725F0	395.0	0	N/A	N/A
eggNOG-mapper	UHGV-0171806_34	552398.HMPREF0866_03098	227.0	0	N/A	N/A
Pfam	UHGV-0171806_34	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-0171806_34	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0171806_34	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0171806_34	PF19190,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
COG	UHGV-0171806_35	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0171806_36	phrog_22978	463.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0171806_36	1410650.JHWL01000003_gene2814	313.0	0	N/A	N/A
UniRef90	UHGV-0171806_37	UniRef90_R6D043	121.0	1.25e-27	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0171806_37	1410650.JHWL01000003_gene2815	116.0	3.62e-26	N/A	N/A
PHROG	UHGV-0171806_38	phrog_24267	89.6	2.7e-26	N/A	unknown function
UniRef90	UHGV-0171806_38	UniRef90_A2HGS9	67.0	0.000000000803	Tail fiber protein, putative	N/A
eggNOG-mapper	UHGV-0171806_38	1042156.CXIVA_07170	105.0	8.47e-23	tail collar domain protein	N/A
COG	UHGV-0171806_38	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0171806_38	COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_39	phrog_511	227.0	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0171806_39	1519439.JPJG01000060_gene1903	251.0	0	N/A	N/A
structural_annotation	UHGV-0171806_39	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_40	phrog_12105	108.5	4.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0171806_40	1519439.JPJG01000060_gene1891	66.6	0.00000000000213	N/A	N/A
PHROG	UHGV-0171806_41	phrog_15239	40.5	0.000000000046	N/A	unknown function
PHROG	UHGV-0171806_42	phrog_1357	199.1	0	major head protein	head and packaging
UniRef90	UHGV-0171806_42	UniRef90_A0A2V2CFL5	533.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0171806_42	1410650.JHWL01000003_gene2830	265.0	0	N/A	N/A
NCBIFam	UHGV-0171806_42	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0171806_42	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_43	phrog_13908	177.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0171806_43	1410650.JHWL01000003_gene2831	95.1	1.73e-19	N/A	N/A
KOfam	UHGV-0171806_44	K07584	60.5	3.3e-17	N/A	N/A
PHROG	UHGV-0171806_44	phrog_4478	66.1	4.2e-19	peptidase	other
UniRef90	UHGV-0171806_44	UniRef90_A0A6N9P4C8	55.1	0.000000171	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0171806_44	1123009.AUID01000013_gene1737	48.9	0.00000761	Cysteine protease Prp	N/A
Pfam	UHGV-0171806_44	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0171806_44	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0171806_44	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_45	phrog_156	295.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0171806_45	1410650.JHWL01000003_gene2833	494.0	0	N/A	N/A
structural_annotation	UHGV-0171806_45	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0171806_46	K06909	135.9	3.8e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0171806_46	phrog_979	141.3	2.99878e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0171806_46	UniRef90_A0A3C0NMI6	630.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0171806_46	1410650.JHWL01000003_gene2834	556.0	0	N/A	N/A
Pfam	UHGV-0171806_46	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0171806_46	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0171806_46	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0171806_47	UniRef90_A0A3C0NNN3	58.2	0.000000162	HTH psq-type domain-containing protein	N/A
PHROG	UHGV-0171806_49	phrog_4973	55.0	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-0171806_49	UniRef90_A0A3D3Y0P8	73.6	0.00000000000000131	DNA-binding protein	N/A
Pfam	UHGV-0171806_49	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0171806_49	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_50	phrog_5781	94.1	1.7e-27	N/A	unknown function
UniRef90	UHGV-0171806_50	UniRef90_A0A2V2FSM6	113.0	1.78e-30	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0171806_50	573061.Clocel_3558	91.7	8.85e-23	N/A	N/A
Pfam	UHGV-0171806_50	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0171806_50	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0171806_50	PF14359,MF_03036,TIGR02133,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_51	phrog_18716	143.5	5.19882e-43	N/A	unknown function
UniRef90	UHGV-0171806_51	UniRef90_A0A1J0GJP7	144.0	3.05063e-42	N/A	N/A
eggNOG-mapper	UHGV-0171806_51	665959.HMPREF1013_00856	114.0	1.79e-31	N/A	N/A
Pfam	UHGV-0171806_51	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0171806_51	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_52	phrog_2245	94.5	1.1e-27	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0171806_52	428125.CLOLEP_01814	96.3	3.32e-23	COG NOG14118 non supervised orthologous group	N/A
Pfam	UHGV-0171806_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0171806_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0171806_54	PF13560,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_55	phrog_10714	48.9	0.00000000000012	N/A	unknown function
structural_annotation	UHGV-0171806_55	PF15188	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_59	phrog_38832	42.4	0.0000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0171806_59	1232443.BAIA02000078_gene48	111.0	2.88e-28	N/A	N/A
PHROG	UHGV-0171806_61	phrog_757	215.6	0	DNA methyltransferase	other
UniRef90	UHGV-0171806_61	UniRef90_UPI0006A41431	246.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0171806_61	1235790.C805_00032	256.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0171806_61	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0171806_61	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0171806_62	K01449	47.8	0.00000000000027	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0171806_62	phrog_30550	149.9	9.80909e-45	N/A	unknown function
UniRef90	UHGV-0171806_62	UniRef90_R6CIF0	130.0	2.12e-35	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0171806_62	1519439.JPJG01000077_gene920	113.0	5.34e-30	Cell Wall Hydrolase	N/A
Pfam	UHGV-0171806_62	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
structural_annotation	UHGV-0171806_62	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0171806_63	phrog_27197	61.4	1.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0171806_63	886882.PPSC2_p0363	92.8	6.32e-21	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0171806_63	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0171806_63	NF007410	N/A	N/A	N/A	N/A