Overview | |
---|---|
UHGV ID | UHGV-0172917 |
vOTU ID | vOTU-014841 |
Representative Genome? | No |
Source | GPD |
Original genome ID | uvig_563909 |
Associated BioSample | SAMN06233224 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 55.65 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 23 |
CheckV host markers | 3 |
Recoded stop codon | Yes |
Viral Content | |
---|---|
geNomad score | 0.9792 |
Virus hallmark genes (geNomad) | 5 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 63.02 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 103,751 |
GC content | 34.28% |
Genetic code | Blepharisma Nuclear Code (15) |
CDS genes | 112 |
CDS density | 92% |
Average CDS length (bps) | 854.44 |
Total tRNA genes | 4 |
Suppressor tRNA genes | 1 |