UHGV-0173831 (vOTU-147325)

Viral Genome: UHGV-0173831

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0173831
vOTU ID	vOTU-147325
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_584404
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	68.87 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9797
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	27.8
Jumbo phage	No

Genome content
Genome length (bp)	41,297
GC content	40.66%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	64
CDS density	85%
Average CDS length (bps)	548.53
Total tRNA genes	5
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 68.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0173831_4	phrog_31631	41.2	0.000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0173831_6	1304866.K413DRAFT_4686	76.6	6.36e-17	N/A	N/A
eggNOG-mapper	UHGV-0173831_7	742738.HMPREF9460_04058	62.8	0.00000000322	N/A	N/A
eggNOG-mapper	UHGV-0173831_8	658655.HMPREF0988_00895	108.0	2.35e-27	N/A	N/A
structural_annotation	UHGV-0173831_11	PF18895,NF009256	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_17	phrog_25639	62.6	4.6e-18	N/A	unknown function
PHROG	UHGV-0173831_18	phrog_38	142.6	2.90069e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0173831_18	UniRef90_A0A352SH30	1029.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_18	397290.C810_01390	668.0	0	chromosome segregation	N/A
Pfam	UHGV-0173831_18	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
COG	UHGV-0173831_18	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173831_18	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_19	phrog_36	63.1	5.7e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0173831_19	UniRef90_A0A352SH29	131.0	3.6e-37	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-0173831_19	97138.C820_00772	80.9	1.37e-17	sigma factor activity	N/A
COG	UHGV-0173831_19	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0173831_19	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_20	phrog_64	171.1	0	portal protein	head and packaging
UniRef90	UHGV-0173831_20	UniRef90_A0A3R6ASF4	912.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0173831_20	1298920.KI911353_gene2663	464.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0173831_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0173831_20	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173831_21	UniRef90_R6C0B6	140.0	4.26e-39	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0173831_22	phrog_909	79.5	3.9e-23	major head protein	head and packaging
UniRef90	UHGV-0173831_22	UniRef90_R7BGI8	167.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0173831_22	268407.PWYN_15680	50.4	0.00000226	N/A	N/A
PHROG	UHGV-0173831_23	phrog_29	158.3	0	major head protein	head and packaging
UniRef90	UHGV-0173831_23	UniRef90_A0A173UF26	632.0	0	Phage major capsid protein E	N/A
eggNOG-mapper	UHGV-0173831_23	1118054.CAGW01000102_gene4700	165.0	2.8026e-45	Phage major capsid protein E	N/A
Pfam	UHGV-0173831_23	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0173831_23	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173831_24	UniRef90_A0A416G2T8	69.7	0.0000000000000591	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0173831_24	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173831_25	1298920.KI911353_gene2658	63.5	0.0000000000227	N/A	N/A
PHROG	UHGV-0173831_26	phrog_1863	53.8	0.000000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0173831_26	1232452.BAIB02000007_gene1606	68.2	0.000000000000259	N/A	N/A
PHROG	UHGV-0173831_27	phrog_18218	136.2	9.99995e-41	N/A	unknown function
UniRef90	UHGV-0173831_27	UniRef90_A0A8D9PGR5	176.0	0	Holin	N/A
eggNOG-mapper	UHGV-0173831_27	411902.CLOBOL_03424	79.7	6.95e-18	N/A	N/A
structural_annotation	UHGV-0173831_27	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173831_28	1298920.KI911353_gene2656	57.0	0.0000000335	N/A	N/A
structural_annotation	UHGV-0173831_28	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173831_29	UniRef90_UPI001BBD4500	161.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0173831_29	397290.C810_01411	206.0	0	N/A	N/A
structural_annotation	UHGV-0173831_29	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_30	phrog_419	106.3	3.6e-31	N/A	unknown function
UniRef90	UHGV-0173831_30	UniRef90_A0A4U9RIR3	130.0	1.04e-37	N/A	N/A
eggNOG-mapper	UHGV-0173831_30	476272.RUMHYD_03324	133.0	1.83e-39	N/A	N/A
structural_annotation	UHGV-0173831_30	PF14083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173831_31	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173831_32	476272.RUMHYD_01968	190.0	0	N/A	N/A
structural_annotation	UHGV-0173831_32	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
KOfam	UHGV-0173831_35	K07273	173.1	0	acm; lysozyme	N/A
PHROG	UHGV-0173831_35	phrog_291	125.2	6.4e-37	endolysin	lysis
UniRef90	UHGV-0173831_35	UniRef90_A0A1Q6KJN7	670.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_35	1235800.C819_00458	206.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0173831_35	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0173831_35	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0173831_35	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0173831_35	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_36	phrog_1535	148.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0173831_36	UniRef90_A0A2H4J4V9	312.0	0	Putative Tmp	N/A
eggNOG-mapper	UHGV-0173831_36	1211844.CBLM010000016_gene1482	223.0	0	tape measure	N/A
COG	UHGV-0173831_36	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0173831_37	phrog_14275	45.0	0.000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0173831_37	689781.AUJX01000006_gene893	216.0	0	N/A	N/A
structural_annotation	UHGV-0173831_37	PF11355,PF18368,TIGR02588,NF038353,COG5633	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173831_39	UniRef90_A0A8J8M9Z3	54.7	0.0000000135	Ribbon-helix-helix protein, CopG family	N/A
structural_annotation	UHGV-0173831_39	PF01402,NF041793,COG4453	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_42	phrog_130	99.4	4.8e-29	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0173831_42	UniRef90_A0A1Q6KK61	285.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_42	1352230.S6AVX3_9CAUD	122.0	7.99e-32	DNA binding	N/A
Pfam	UHGV-0173831_42	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
PHROG	UHGV-0173831_43	phrog_2657	88.0	1.4e-26	transcriptional regulator	transcription regulation
UniRef90	UHGV-0173831_43	UniRef90_UPI0009305F59	216.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0173831_43	180332.JTGN01000007_gene3610	183.0	0	PFAM Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0173831_43	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
COG	UHGV-0173831_43	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0173831_43	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_44	phrog_373	115.2	6.5e-34	anti-repressor	transcription regulation
UniRef90	UHGV-0173831_44	UniRef90_A0A2S6HJ41	232.0	0	Phage regulator Rha-like protein	N/A
eggNOG-mapper	UHGV-0173831_44	478749.BRYFOR_07645	129.0	3.78e-35	Phage regulatory protein	N/A
Pfam	UHGV-0173831_44	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0173831_44	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0173831_44	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0173831_44	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_46	phrog_1194	63.4	3.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0173831_46	483218.BACPEC_01144	68.6	0.00000000000072	N/A	N/A
Pfam	UHGV-0173831_46	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0173831_46	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_47	phrog_18190	599.1	0	N/A	unknown function
UniRef90	UHGV-0173831_47	UniRef90_UPI001C01E293	1015.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_47	397290.C810_01435	437.0	0	N/A	N/A
Pfam	UHGV-0173831_47	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0173831_47	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_49	phrog_17196	137.2	0	kinase	other
UniRef90	UHGV-0173831_49	UniRef90_D4L3U0	610.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_49	1235790.C805_00090	191.0	0	N/A	N/A
KOfam	UHGV-0173831_52	K22300	62.0	1.4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0173831_52	phrog_8	79.2	7.3e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0173831_52	UniRef90_A0A1Q6KAD1	232.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_52	1235790.C805_00362	91.3	5.99e-22	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0173831_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0173831_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0173831_52	PF13560,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173831_53	UniRef90_A0A1Q6KAH5	138.0	1.81006e-41	N/A	N/A
eggNOG-mapper	UHGV-0173831_53	1121335.Clst_0370	92.8	2.94e-24	N/A	N/A
structural_annotation	UHGV-0173831_53	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173831_56	PF19962,TIGR04535	N/A	N/A	N/A	N/A
KOfam	UHGV-0173831_57	K07741	206.1	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0173831_57	phrog_63	172.9	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0173831_57	UniRef90_UPI001C00DDF6	468.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_57	658655.HMPREF0988_02592	331.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0173831_57	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0173831_57	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0173831_57	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0173831_57	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0173831_58	K07699	138.7	3.80004e-41	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
PHROG	UHGV-0173831_58	phrog_37855	98.9	4.9e-29	N/A	unknown function
UniRef90	UHGV-0173831_58	UniRef90_A0A1Q6KA48	246.0	0	Spo0A_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_58	411489.CLOL250_02814	107.0	1.45e-26	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	N/A
Pfam	UHGV-0173831_58	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0173831_58	COG2201	N/A	N/A	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	N/A
structural_annotation	UHGV-0173831_58	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-0173831_60	K08309	46.6	0.00000000000059	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0173831_60	phrog_19890	101.4	8.2e-30	N/A	unknown function
UniRef90	UHGV-0173831_60	UniRef90_UPI001C014972	305.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_60	1410650.JHWL01000003_gene2854	107.0	7.22e-27	lytic transglycosylase activity	N/A
Pfam	UHGV-0173831_60	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0173831_60	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0173831_60	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
KOfam	UHGV-0173831_61	K03111	49.4	2.1e-17	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0173831_61	phrog_26861	137.4	7.50003e-41	N/A	unknown function
UniRef90	UHGV-0173831_61	UniRef90_A0A1Q6KA67	431.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0173831_61	1256908.HMPREF0373_01719	237.0	0	N/A	N/A
Pfam	UHGV-0173831_61	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0173831_61	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0173831_61	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0173831_61	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0173831_62	K19171	108.3	8.1e-32	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0173831_62	phrog_77	237.0	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173831_62	UniRef90_A0A1Q6KA53	1139.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-0173831_62	1294142.CINTURNW_1008	308.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0173831_62	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0173831_62	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0173831_62	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0173831_64	phrog_4433	190.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0173831_64	665950.HMPREF1025_01373	162.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0173831_64	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A