UHGV-0174828 (vOTU-028784)

Viral Genome: UHGV-0174828

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0174828
vOTU ID	vOTU-028784
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_579990
Associated BioSample	SAMN09781726
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.5 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9796
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	8.81
Jumbo phage	No

Genome content
Genome length (bp)	22,619
GC content	55.53%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	42
CDS density	92%
Average CDS length (bps)	494.64
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0174828_2	phrog_14556	42.0	0.0000000000097	N/A	unknown function
eggNOG-mapper	UHGV-0174828_2	1120998.AUFC01000015_gene1569	75.5	0.0000000000000354	competence protein COMEC	N/A
COG	UHGV-0174828_2	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
structural_annotation	UHGV-0174828_3	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0174828_4	K14059	148.4	8.54792e-44	int; integrase	N/A
PHROG	UHGV-0174828_4	phrog_1	165.6	0	integrase	integration and excision
UniRef90	UHGV-0174828_4	UniRef90_A0A8D9UGU2	645.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0174828_4	693746.OBV_41260	298.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0174828_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0174828_4	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0174828_4	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174828_5	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_6	phrog_20016	205.2	0	N/A	unknown function
UniRef90	UHGV-0174828_6	UniRef90_A0A285PT46	194.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0174828_6	397290.C810_05214	171.0	0	N/A	N/A
structural_annotation	UHGV-0174828_6	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_7	phrog_16490	152.7	2.8026e-45	N/A	unknown function
eggNOG-mapper	UHGV-0174828_7	1408437.JNJN01000043_gene803	162.0	0	N/A	N/A
PHROG	UHGV-0174828_8	phrog_22984	71.1	5.6e-21	N/A	unknown function
PHROG	UHGV-0174828_9	phrog_21718	110.7	1.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-0174828_9	397290.C810_05210	78.6	2.81e-16	N/A	N/A
PHROG	UHGV-0174828_10	phrog_3754	111.5	6.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-0174828_10	1226322.HMPREF1545_00073	173.0	0	N/A	N/A
structural_annotation	UHGV-0174828_15	PF01402,NF008671	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174828_16	UniRef90_A0A8D9PDQ3	84.3	5.99e-20	ECF sigma factor	N/A
structural_annotation	UHGV-0174828_16	PF04545,MF_00674,NF009179,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_17	phrog_21357	86.5	2.9e-25	endolysin	lysis
UniRef90	UHGV-0174828_17	UniRef90_A0A329UV62	173.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0174828_17	243164.DET1070	166.0	0	SMART Glycoside hydrolase, family 25 subgroup	N/A
Pfam	UHGV-0174828_17	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0174828_17	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0174828_17	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0174828_17	PF10030,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_18	phrog_13256	78.3	6.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0174828_18	1226322.HMPREF1545_00132	69.7	0.00000000000000527	N/A	N/A
UniRef90	UHGV-0174828_19	UniRef90_A0A1T5AMW7	95.5	6.33e-21	NAGPA domain-containing protein	N/A
structural_annotation	UHGV-0174828_19	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_20	phrog_937	46.0	0.000000000001	hemolysin	other
eggNOG-mapper	UHGV-0174828_20	1519439.JPJG01000023_gene533	65.9	0.000000000000875	N/A	N/A
PHROG	UHGV-0174828_24	phrog_13589	185.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0174828_24	742733.HMPREF9469_05009	229.0	0	N/A	N/A
PHROG	UHGV-0174828_25	phrog_31538	40.8	0.000000000046	N/A	unknown function
structural_annotation	UHGV-0174828_26	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_28	phrog_32744	649.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0174828_28	1120998.AUFC01000030_gene2247	235.0	0	N/A	N/A
structural_annotation	UHGV-0174828_28	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_29	phrog_1194	41.8	0.000000000019	N/A	unknown function
structural_annotation	UHGV-0174828_29	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_30	phrog_6900	271.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0174828_30	UniRef90_A0A3D0EFB4	239.0	0	Phage tail protein (Fragment)	N/A
eggNOG-mapper	UHGV-0174828_30	536233.CLO_1577	306.0	0	tape measure	N/A
COG	UHGV-0174828_30	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0174828_30	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_31	phrog_7115	112.8	2.2e-33	N/A	unknown function
UniRef90	UHGV-0174828_31	UniRef90_A0A810PSE6	221.0	0	bPH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0174828_31	1514668.JOOA01000002_gene2950	204.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0174828_31	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0174828_31	PF08000,MF_00437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174828_33	UniRef90_A0A285PXU7	68.2	0.00000000000468	Consensus disorder prediction	N/A
PHROG	UHGV-0174828_34	phrog_885	87.8	1.2e-25	major tail protein	tail
UniRef90	UHGV-0174828_34	UniRef90_A0A843J9F0	217.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0174828_34	1504822.CCNO01000012_gene492	239.0	0	N/A	N/A
structural_annotation	UHGV-0174828_34	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_35	phrog_17405	41.3	0.000000000026	head protein	head and packaging
UniRef90	UHGV-0174828_35	UniRef90_A0A415JI88	116.0	2.67e-31	N/A	N/A
structural_annotation	UHGV-0174828_35	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_36	phrog_17977	67.8	1.4e-19	N/A	unknown function
UniRef90	UHGV-0174828_36	UniRef90_UPI00141211AB	81.3	1.06e-17	head-tail adaptor protein	N/A
structural_annotation	UHGV-0174828_36	TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_38	phrog_544	180.3	0	major head protein	head and packaging
UniRef90	UHGV-0174828_38	UniRef90_A0A810PZM2	725.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0174828_38	1347392.CCEZ01000005_gene1236	276.0	0	N/A	N/A
Pfam	UHGV-0174828_38	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0174828_38	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174828_39	UniRef90_A0A6B9SU02	98.6	3.67e-22	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-0174828_39	476272.RUMHYD_02853	52.8	0.00000816	N/A	N/A
structural_annotation	UHGV-0174828_39	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_40	phrog_5	71.7	1.5e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-0174828_40	UniRef90_A0A4D7AJK9	197.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0174828_40	386415.NT01CX_2170	110.0	1.7e-29	N/A	N/A
Pfam	UHGV-0174828_40	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0174828_40	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0174828_40	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174828_41	UniRef90_D4JVI7	109.0	5.66e-27	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0174828_41	1042156.CXIVA_01840	67.0	0.0000000000755	Phage Mu protein F like protein	N/A
COG	UHGV-0174828_41	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0174828_42	phrog_2468	105.2	5.5e-31	head morphogenesis	head and packaging
UniRef90	UHGV-0174828_42	UniRef90_A0A810PSD3	502.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0174828_42	1111121.HMPREF1247_0797	184.0	0	cell adhesion	N/A
Pfam	UHGV-0174828_42	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0174828_42	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0174828_42	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174828_42	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A