UHGV-0175027 (vOTU-046526)

Viral Genome: UHGV-0175027

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0175027
vOTU ID	vOTU-046526
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_590189
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9798
Virus hallmark genes (geNomad)	14
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.06
Jumbo phage	No

Genome content
Genome length (bp)	34,773
GC content	56.44%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	55
CDS density	92%
Average CDS length (bps)	584.24
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0175027_1	phrog_12	78.5	7.6e-23	portal protein	head and packaging
UniRef90	UHGV-0175027_1	UniRef90_A0A0L6JH89	276.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0175027_1	398512.JQKC01000009_gene449	276.0	0	Phage portal protein	N/A
Pfam	UHGV-0175027_1	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0175027_1	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
KOfam	UHGV-0175027_2	K06904	147.0	1.69557e-43	N/A	N/A
PHROG	UHGV-0175027_2	phrog_80	164.5	0	head maturation protease	head and packaging
UniRef90	UHGV-0175027_2	UniRef90_A0A7C6PUY5	214.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0175027_2	913865.DOT_5634	211.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0175027_2	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0175027_2	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0175027_2	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0175027_2	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_3	phrog_10	152.9	0	major head protein	head and packaging
UniRef90	UHGV-0175027_3	UniRef90_A0A1S2M036	307.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0175027_3	396034.A6XMJ6_9CAUD	288.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0175027_3	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0175027_3	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0175027_3	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_4	phrog_2550	51.7	0.00000000000001	N/A	unknown function
structural_annotation	UHGV-0175027_4	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_5	phrog_19734	61.4	1.8e-17	N/A	unknown function
UniRef90	UHGV-0175027_5	UniRef90_A0A316NL63	77.8	3.08e-16	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0175027_5	349161.Dred_2602	58.2	0.00000000282	N/A	N/A
structural_annotation	UHGV-0175027_5	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175027_6	908340.HMPREF9406_2574	68.9	0.000000000000123	N/A	N/A
structural_annotation	UHGV-0175027_6	PF05657,COG5003	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175027_7	908340.HMPREF9406_2573	51.6	0.00000581	N/A	N/A
structural_annotation	UHGV-0175027_7	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_8	phrog_88	89.7	3.6e-26	major tail protein	tail
UniRef90	UHGV-0175027_8	UniRef90_S0FUN2	128.0	7.58e-34	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0175027_8	1195236.CTER_5106	128.0	1.27e-34	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0175027_8	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0175027_8	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175027_8	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175027_9	PF16478	N/A	N/A	N/A	N/A
KOfam	UHGV-0175027_11	K12575	44.4	0.0000000000021	SLK19; kinetochore protein SLK19	N/A
PHROG	UHGV-0175027_11	phrog_10613	72.3	4.3e-30	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0175027_11	1408415.JHXL01000001_gene400	104.0	2.69e-20	phage tail tape measure protein	N/A
COG	UHGV-0175027_11	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0175027_12	PF06995,PF02010,MF_04116,NF010681,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_13	phrog_26795	112.4	2.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0175027_13	796940.HMPREF9628_00133	119.0	5.38e-28	N/A	N/A
structural_annotation	UHGV-0175027_13	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0175027_15	K07296	41.2	0.000000000016	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-0175027_15	phrog_5073	46.7	0.00000000000038	tail fiber protein	tail
Pfam	UHGV-0175027_15	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0175027_17	phrog_4105	74.8	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0175027_17	537013.CLOSTMETH_01753	57.0	0.00000000358	N/A	N/A
KOfam	UHGV-0175027_18	K19304	114.9	9.2e-34	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0175027_18	phrog_7767	106.9	1.2e-31	metallo-endopeptidase	other
UniRef90	UHGV-0175027_18	UniRef90_A0A168DE04	76.6	0.00000000000102	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0175027_18	1449126.JQKL01000043_gene1877	102.0	1.68e-22	Peptidase family M23	N/A
Pfam	UHGV-0175027_18	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0175027_18	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0175027_18	PF01551,PF09992,NF040883,COG0739,COG3698	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175027_20	693746.OBV_19020	63.2	0.00000000000483	N/A	N/A
PHROG	UHGV-0175027_24	phrog_16490	128.1	4.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-0175027_24	1408437.JNJN01000043_gene803	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-0175027_25	1408437.JNJN01000043_gene802	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0175027_26	1378168.N510_03079	82.8	8.4e-17	N/A	N/A
PHROG	UHGV-0175027_28	phrog_16123	60.6	2.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0175027_28	1273103.NM10_00919	80.1	5.63e-17	N/A	N/A
Pfam	UHGV-0175027_29	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0175027_29	PF00196,PF18024,NF040595,COG2771	N/A	N/A	N/A	N/A
COG	UHGV-0175027_30	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0175027_30	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_32	phrog_13470	45.2	0.00000000000041	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175027_32	UniRef90_C0D8J3	97.8	4.71e-21	AP2 domain protein	N/A
eggNOG-mapper	UHGV-0175027_32	742740.HMPREF9474_00071	100.0	1.31e-22	N/A	N/A
KOfam	UHGV-0175027_33	K06400	348.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0175027_33	phrog_95	325.9	0	integrase	integration and excision
UniRef90	UHGV-0175027_33	UniRef90_UPI00189960B8	410.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0175027_33	1235835.C814_00825	368.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0175027_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0175027_33	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0175027_33	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0175027_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0175027_33	PF00239,PF07508,PF19962,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0175027_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0175027_34	PF13560,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_36	phrog_10292	50.0	0.000000000000038	N/A	unknown function
UniRef90	UHGV-0175027_36	UniRef90_A0A1I6JRB5	79.0	5.7e-16	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0175027_36	1501230.ET33_30525	53.5	0.000000132	TM2 domain	N/A
Pfam	UHGV-0175027_36	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0175027_36	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0175027_37	K18830	52.1	0.000000000000018	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0175027_37	phrog_4	44.8	0.0000000000028	transcriptional repressor	transcription regulation
UniRef90	UHGV-0175027_37	UniRef90_A0A8E3SLX4	86.7	2.37e-19	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0175027_37	1203606.HMPREF1526_01317	86.3	5.19e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0175027_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0175027_37	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0175027_37	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_44	phrog_15768	82.6	6.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0175027_44	693979.Bache_0304	65.9	0.000000000083	N/A	N/A
Pfam	UHGV-0175027_45	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
PHROG	UHGV-0175027_50	phrog_474	98.8	9.7e-29	phosphofructokinase	other
UniRef90	UHGV-0175027_50	UniRef90_A0A3C1WR20	87.0	3.11e-20	N/A	N/A
eggNOG-mapper	UHGV-0175027_50	1203606.HMPREF1526_00237	73.9	7.98e-16	N/A	N/A
Pfam	UHGV-0175027_50	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-0175027_50	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_51	phrog_3584	188.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0175027_51	1519439.JPJG01000060_gene1883	154.0	5.46506e-43	N/A	N/A
structural_annotation	UHGV-0175027_51	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_53	phrog_361	70.5	2.8e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0175027_53	UniRef90_A0A7C6PWI7	87.4	5.35e-20	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0175027_53	358681.BBR47_29130	73.9	0.00000000000000172	Phage terminase, small subunit	N/A
Pfam	UHGV-0175027_53	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0175027_53	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0175027_53	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_54	phrog_9	297.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0175027_54	UniRef90_A0A7C6PV87	722.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0175027_54	491915.Aflv_0661	711.0	0	Phage Terminase	N/A
Pfam	UHGV-0175027_54	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0175027_54	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0175027_54	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0175027_54	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0175027_55	phrog_12	57.2	2e-16	portal protein	head and packaging
UniRef90	UHGV-0175027_55	UniRef90_UPI001CE18266	161.0	2.8026e-45	phage portal protein	N/A
eggNOG-mapper	UHGV-0175027_55	1121423.JONT01000042_gene1421	162.0	1.4013e-45	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0175027_55	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0175027_55	COG4695	N/A	N/A	Phage portal protein BeeE	N/A