UHGV-0176293 (vOTU-071807)

Viral Genome: UHGV-0176293

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0176293
vOTU ID	vOTU-071807
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_584014
Associated BioSample	SAMN09781704
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.89 (High-quality)
Trimmed provirus	No
CheckV viral markers	3
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9791
Virus hallmark genes (geNomad)	2
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.5
Jumbo phage	No

Genome content
Genome length (bp)	13,490
GC content	44.76%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	22
CDS density	97%
Average CDS length (bps)	597.68
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0176293_9	K03111	124.2	1.7e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0176293_9	phrog_44	118.0	8.3e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176293_9	UniRef90_A0A4Q2KCX2	113.0	9.55e-30	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0176293_9	626523.GCWU000342_01558	97.4	3.36e-24	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0176293_9	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0176293_9	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0176293_9	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0176293_9	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0176293_9	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0176293_11	K21237	99.5	3.7e-29	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0176293_11	phrog_1907	222.0	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176293_11	UniRef90_A0A843HG57	635.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0176293_11	12345.Q96206_BPGA1	79.0	0.00000000000224	nucleotide binding	N/A
Pfam	UHGV-0176293_11	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-0176293_11	PF03175,MF_04055,NF004417,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0176293_12	phrog_2150	98.9	4.9e-29	terminase	head and packaging
UniRef90	UHGV-0176293_12	UniRef90_A0A843HL40	253.0	0	Phage DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-0176293_12	338473.A6XAE1_9CAUD	72.4	0.0000000000212	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-0176293_12	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-0176293_12	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0176293_14	K21471	46.7	0.00000000000063	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0176293_14	phrog_329	48.8	0.000000000000069	minor tail protein	tail
eggNOG-mapper	UHGV-0176293_14	701521.PECL_1441	53.5	0.00000379	NlpC P60 family protein	N/A
Pfam	UHGV-0176293_14	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0176293_14	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0176293_14	PF00877,NF008096,COG0791	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176293_17	UniRef90_A0A843GUF8	92.8	2.54e-17	Ig-like domain repeat protein	N/A
structural_annotation	UHGV-0176293_17	PF21703,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176293_18	PF20934	N/A	N/A	N/A	N/A
PHROG	UHGV-0176293_19	phrog_11037	48.8	0.000000000000098	N/A	unknown function
UniRef90	UHGV-0176293_19	UniRef90_A0A1I0QYS4	64.7	0.00000000334	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0176293_19	33035.JPJF01000023_gene3229	67.0	0.000000000252	N/A	N/A
Pfam	UHGV-0176293_19	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
structural_annotation	UHGV-0176293_19	PF18013	N/A	N/A	N/A	N/A
PHROG	UHGV-0176293_20	phrog_2038	82.2	5.9e-24	upper collar connector	connector
UniRef90	UHGV-0176293_20	UniRef90_A0A2Z4GUB7	234.0	0	Upper collar protein	N/A
Pfam	UHGV-0176293_20	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-0176293_20	PF05352,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A