UHGV-0176718 (vOTU-147813)

Viral Genome: UHGV-0176718

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0176718
vOTU ID	vOTU-147813
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_592478
Associated BioSample	SAMN09781743
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	70.17 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.981
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	22.15
Jumbo phage	No

Genome content
Genome length (bp)	40,436
GC content	49.89%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	63
CDS density	85%
Average CDS length (bps)	545.76
Total tRNA genes	2
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 70.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0176718_2	1408437.JNJN01000043_gene802	103.0	6.57e-27	N/A	N/A
PHROG	UHGV-0176718_3	phrog_374	205.7	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176718_3	UniRef90_A0A2Z4QA49	210.0	0	AP2 protein	N/A
eggNOG-mapper	UHGV-0176718_3	1540091.A0A0A0RNF3_9CAUD	174.0	0	sequence-specific DNA binding transcription factor activity	N/A
structural_annotation	UHGV-0176718_3	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_4	phrog_16490	106.3	2.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-0176718_4	1408437.JNJN01000043_gene803	170.0	0	N/A	N/A
PHROG	UHGV-0176718_7	phrog_21718	43.2	0.0000000000063	N/A	unknown function
PHROG	UHGV-0176718_9	phrog_15303	78.0	1.1e-22	N/A	unknown function
KOfam	UHGV-0176718_11	K07273	164.8	0	acm; lysozyme	N/A
PHROG	UHGV-0176718_11	phrog_291	118.2	8.8e-35	endolysin	lysis
UniRef90	UHGV-0176718_11	UniRef90_A0A564U0D3	390.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0176718_11	718252.FP2_04890	238.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0176718_11	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0176718_11	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0176718_11	PF01183,TIGR04053,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_12	phrog_28526	102.9	1.4e-30	N/A	unknown function
UniRef90	UHGV-0176718_12	UniRef90_A0A415D4T1	75.5	4.38e-17	N/A	N/A
eggNOG-mapper	UHGV-0176718_12	411462.DORLON_00769	79.0	3.1e-19	N/A	N/A
Pfam	UHGV-0176718_12	PF04255	N/A	N/A	N/A	DUF433
PHROG	UHGV-0176718_14	phrog_24267	54.2	0.0000000000000026	N/A	unknown function
UniRef90	UHGV-0176718_14	UniRef90_A0A1I5LHR7	57.4	0.000000506	Microcystin-dependent protein	N/A
eggNOG-mapper	UHGV-0176718_14	508419.F8J176_9CAUD	104.0	1.92e-23	peptidoglycan catabolic process	N/A
PHROG	UHGV-0176718_15	phrog_27381	46.3	8.7e-25	tail fiber protein	tail
PHROG	UHGV-0176718_16	phrog_18725	76.4	4.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0176718_16	1226322.HMPREF1545_00062	86.7	2.54e-19	N/A	N/A
PHROG	UHGV-0176718_17	phrog_13879	217.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0176718_17	1007103.AFHW01000096_gene3259	155.0	5.71e-38	N/A	N/A
Pfam	UHGV-0176718_17	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
Pfam	UHGV-0176718_17	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0176718_17	PF14594,PF19789,PF03256,PF09134,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_18	phrog_1194	86.1	3.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-0176718_18	665956.HMPREF1032_03629	57.0	0.0000000153	N/A	N/A
Pfam	UHGV-0176718_18	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0176718_18	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_19	phrog_1535	143.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0176718_19	UniRef90_A0A318EME6	159.0	1.62e-35	Phage-related protein	N/A
eggNOG-mapper	UHGV-0176718_19	1121866.AUGK01000003_gene1437	199.0	0	phage tail tape measure protein	N/A
COG	UHGV-0176718_19	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-0176718_20	1121333.JMLH01000047_gene1011	79.7	3.49e-17	N/A	N/A
UniRef90	UHGV-0176718_21	UniRef90_A0A847YX95	70.5	0.000000000000204	N/A	N/A
eggNOG-mapper	UHGV-0176718_21	1123263.AUKY01000015_gene1618	62.0	0.0000000000689	N/A	N/A
Pfam	UHGV-0176718_21	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0176718_21	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_22	phrog_158	45.2	0.0000000000017	major tail protein	tail
UniRef90	UHGV-0176718_22	UniRef90_UPI001D087591	119.0	5.19e-32	phage tail protein	N/A
eggNOG-mapper	UHGV-0176718_22	1449343.JQLQ01000002_gene1514	51.6	0.00000396	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0176718_22	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176718_23	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176718_24	476272.RUMHYD_01963	51.6	0.00000951	N/A	N/A
eggNOG-mapper	UHGV-0176718_25	1298920.KI911353_gene2656	53.1	0.000000439	N/A	N/A
structural_annotation	UHGV-0176718_25	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176718_26	UniRef90_R6N215	82.4	3.72e-18	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-0176718_26	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_27	phrog_29	169.3	0	major head protein	head and packaging
UniRef90	UHGV-0176718_27	UniRef90_A0A7X5DZ98	346.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0176718_27	476272.RUMHYD_01946	235.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0176718_27	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0176718_27	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_30	phrog_64	149.8	1.54143e-44	portal protein	head and packaging
UniRef90	UHGV-0176718_30	UniRef90_A0A371ILT4	334.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0176718_30	1121866.AUGK01000003_gene1429	278.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0176718_30	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0176718_30	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_32	phrog_38	175.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0176718_32	UniRef90_UPI000419A6BC	431.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0176718_32	1121866.AUGK01000003_gene1428	431.0	0	chromosome segregation	N/A
COG	UHGV-0176718_32	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176718_32	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
KOfam	UHGV-0176718_34	K14060	137.3	1.50001e-40	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0176718_34	phrog_125	158.6	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176718_34	UniRef90_A0A3D0LYX8	219.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0176718_34	411469.EUBHAL_01860	197.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0176718_34	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0176718_34	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0176718_34	PF00239,PF02796,MF_00489,NF009949,COG1961	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176718_35	PF20075	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176718_37	PF19807,NF041793,COG4877	N/A	N/A	N/A	N/A
KOfam	UHGV-0176718_38	K07741	89.2	6.6e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-0176718_38	phrog_373	140.6	1.29998e-41	anti-repressor	transcription regulation
UniRef90	UHGV-0176718_38	UniRef90_UPI001C039A6C	175.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0176718_38	1567013.A0A0A7RVQ9_9CAUD	158.0	2.8026e-45	AntA/AntB antirepressor	N/A
Pfam	UHGV-0176718_38	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0176718_38	PF10552	N/A	N/A	ORF6C domain	ORF6C
structural_annotation	UHGV-0176718_38	PF10552,PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176718_40	PF12869,MF_00720,NF040991,COG4085	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_41	phrog_14275	45.9	0.00000000000078	N/A	unknown function
eggNOG-mapper	UHGV-0176718_41	1280676.AUJO01000001_gene2313	66.6	0.0000000013	N/A	N/A
PHROG	UHGV-0176718_44	phrog_434	41.9	0.000000000016	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0176718_44	88870.Q9ZX24_BPMT4	49.7	0.00000119	N/A	N/A
KOfam	UHGV-0176718_48	K02314	217.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0176718_48	phrog_19	223.3	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176718_48	UniRef90_A0A564SBR1	406.0	0	Replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0176718_48	1203606.HMPREF1526_01325	163.0	7.1186e-43	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0176718_48	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0176718_48	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0176718_48	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_49	phrog_678	44.7	0.0000000000026	replication initiation O-like	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0176718_49	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0176718_49	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0176718_49	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_50	phrog_599	45.0	0.0000000000024	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0176718_50	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0176718_50	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0176718_50	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0176718_50	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0176718_51	phrog_13999	66.8	2.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0176718_51	1391428.V5KT07_9CAUD	57.8	0.000000000303	N/A	N/A
structural_annotation	UHGV-0176718_54	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176718_62	UniRef90_UPI0012DD33A2	309.0	0	restriction endonuclease subunit M	N/A
eggNOG-mapper	UHGV-0176718_62	596329.HMPREF0631_0252	219.0	0	restriction endonuclease	N/A
PADLOC	UHGV-0176718_62	MTase_II_00176	164.5	0	Type II methyltransferase	RM
COG	UHGV-0176718_62	COG1002	N/A	N/A	Type II restriction/modification system, endonuclease and methylase domains	N/A