UHGV-0176971 (vOTU-028935)

Viral Genome: UHGV-0176971

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0176971
vOTU ID	vOTU-028935
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_587935
Associated BioSample	SAMN09781777
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	63.23 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9817
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.24
Jumbo phage	No

Genome content
Genome length (bp)	26,714
GC content	53.52%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	91%
Average CDS length (bps)	555.07
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.23)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0176971_2	phrog_3136	138.5	1.99993e-41	N/A	unknown function
UniRef90	UHGV-0176971_2	UniRef90_A0A3D0HBD2	133.0	3.7e-36	ASCH domain-containing protein	N/A
structural_annotation	UHGV-0176971_2	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176971_3	UniRef90_A0A8D9PDQ6	142.0	4.37205e-43	Restriction alleviation protein	N/A
Pfam	UHGV-0176971_3	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0176971_3	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_6	phrog_872	143.2	1.96182e-44	N/A	unknown function
UniRef90	UHGV-0176971_6	UniRef90_A0A8J6M9F5	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0176971_6	1519439.JPJG01000060_gene1880	198.0	0	N/A	N/A
Pfam	UHGV-0176971_6	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0176971_6	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0176971_6	PF11195	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176971_8	UniRef90_A0A285PYI3	63.5	0.0000000000561	Homeodomain-like domain	N/A
eggNOG-mapper	UHGV-0176971_8	742738.HMPREF9460_02503	123.0	2.13e-35	N/A	N/A
structural_annotation	UHGV-0176971_8	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176971_9	UniRef90_UPI0018AC41F1	153.0	1.4013e-45	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0176971_9	1226322.HMPREF1545_00042	126.0	1.6e-35	N/A	N/A
structural_annotation	UHGV-0176971_9	PF04218,COG3677	N/A	N/A	N/A	N/A
KOfam	UHGV-0176971_10	K06909	386.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0176971_10	phrog_5653	174.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0176971_10	UniRef90_A0A2U1BEH4	701.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0176971_10	33035.JPJF01000106_gene3136	468.0	0	Terminase small subunit	N/A
Pfam	UHGV-0176971_10	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0176971_10	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0176971_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0176971_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0176971_10	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_11	phrog_533	354.5	0	portal protein	head and packaging
UniRef90	UHGV-0176971_11	UniRef90_A0A2U1BEK0	631.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0176971_11	1226322.HMPREF1545_00044	617.0	0	N/A	N/A
Pfam	UHGV-0176971_11	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0176971_11	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_12	phrog_581	298.5	0	minor head protein	head and packaging
UniRef90	UHGV-0176971_12	UniRef90_UPI001D080D49	582.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0176971_12	1226322.HMPREF1545_00046	371.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0176971_12	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0176971_12	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176971_12	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_14	phrog_194	93.2	3.8e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0176971_14	UniRef90_A0A2Z4Q9Y8	133.0	9.24e-36	Minor structural protein	N/A
eggNOG-mapper	UHGV-0176971_14	1232443.BAIA02000078_gene31	97.4	5.55e-23	N/A	N/A
Pfam	UHGV-0176971_14	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0176971_14	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_15	phrog_212	268.0	0	major head protein	head and packaging
UniRef90	UHGV-0176971_15	UniRef90_A0A354MR33	530.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0176971_15	935836.JAEL01000021_gene1494	348.0	0	N/A	N/A
structural_annotation	UHGV-0176971_15	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_16	phrog_541	103.7	1.1e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-0176971_16	642492.Clole_0822	63.2	0.0000000000835	N/A	N/A
PHROG	UHGV-0176971_17	phrog_3366	84.3	1.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-0176971_17	1226322.HMPREF1545_00053	158.0	0	N/A	N/A
structural_annotation	UHGV-0176971_17	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_18	phrog_556	74.5	1.3e-21	minor head protein	head and packaging
UniRef90	UHGV-0176971_18	UniRef90_A0A2U1BEM0	197.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0176971_18	1226322.HMPREF1545_00054	161.0	0	Minor capsid protein	N/A
Pfam	UHGV-0176971_18	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0176971_18	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_19	phrog_3266	60.4	2.8e-17	tail completion	connector
eggNOG-mapper	UHGV-0176971_19	1232443.BAIA02000078_gene24	191.0	0	N/A	N/A
structural_annotation	UHGV-0176971_19	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_20	phrog_3099	92.6	5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0176971_20	1232443.BAIA02000078_gene23	235.0	0	N/A	N/A
structural_annotation	UHGV-0176971_20	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_21	phrog_11299	84.6	1.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0176971_21	693746.OBV_18160	106.0	1.73e-27	N/A	N/A
structural_annotation	UHGV-0176971_21	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_22	phrog_706	119.0	3.9e-35	N/A	unknown function
UniRef90	UHGV-0176971_22	UniRef90_UPI000682A80B	249.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0176971_22	693746.OBV_18170	237.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0176971_22	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0176971_22	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_23	phrog_806	76.2	3.7e-22	N/A	unknown function
UniRef90	UHGV-0176971_23	UniRef90_UPI00137B5163	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0176971_23	397290.C810_05150	142.0	2.37999e-40	N/A	N/A
Pfam	UHGV-0176971_23	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0176971_23	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_24	phrog_1535	97.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0176971_24	UniRef90_A0A810PX76	159.0	1.53e-37	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0176971_24	1235797.C816_04182	286.0	0	SLT domain	N/A
COG	UHGV-0176971_24	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176971_24	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_25	phrog_1194	77.1	2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0176971_25	1232443.BAIA02000078_gene17	120.0	1.57e-33	N/A	N/A
structural_annotation	UHGV-0176971_25	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_26	phrog_32308	49.3	0.000000000000014	N/A	unknown function
UniRef90	UHGV-0176971_26	UniRef90_A0A2Z4QA17	261.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0176971_26	1235797.C816_04180	302.0	0	N/A	N/A
structural_annotation	UHGV-0176971_26	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176971_27	UniRef90_R9LW25	224.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0176971_27	1235797.C816_04179	224.0	0	Chaperone of endosialidase	N/A
Pfam	UHGV-0176971_27	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0176971_27	PF07902,NF041249	N/A	N/A	N/A	N/A
KOfam	UHGV-0176971_29	K07296	41.5	0.000000000013	ADIPOQ, ACDC; adiponectin	N/A
eggNOG-mapper	UHGV-0176971_29	1519439.JPJG01000060_gene1892	152.0	8.11e-36	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0176971_29	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0176971_29	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0176971_33	phrog_27545	154.8	0	N/A	unknown function
UniRef90	UHGV-0176971_33	UniRef90_A0A2V2GQB6	164.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0176971_33	1519439.JPJG01000060_gene1895	307.0	0	N/A	N/A
Pfam	UHGV-0176971_33	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0176971_33	PF16170	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_34	phrog_937	45.2	0.0000000000018	hemolysin	other
eggNOG-mapper	UHGV-0176971_34	1519439.JPJG01000023_gene533	72.0	0.00000000000000384	N/A	N/A
PHROG	UHGV-0176971_36	phrog_13256	58.4	9.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0176971_36	1519439.JPJG01000060_gene1898	110.0	3.21e-31	N/A	N/A
PHROG	UHGV-0176971_37	phrog_21825	115.5	5.2e-34	endolysin	lysis
UniRef90	UHGV-0176971_37	UniRef90_R5SN87	266.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0176971_37	1007096.BAGW01000022_gene2648	150.0	6.05361e-43	CHAP domain	N/A
Pfam	UHGV-0176971_37	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0176971_37	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0176971_37	TIGR02594	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176971_38	UniRef90_A0A6N3FXW7	129.0	4.81e-37	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0176971_38	742738.HMPREF9460_04059	75.5	4.7e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0176971_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0176971_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0176971_38	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0176971_41	phrog_3754	111.6	6.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0176971_41	1226322.HMPREF1545_00073	166.0	0	N/A	N/A
PHROG	UHGV-0176971_42	phrog_21718	110.1	1.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-0176971_42	476272.RUMHYD_01768	66.6	0.000000000007	N/A	N/A
PHROG	UHGV-0176971_43	phrog_22984	69.8	3.6e-20	N/A	unknown function
PHROG	UHGV-0176971_44	phrog_16490	44.4	0.000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0176971_44	397290.C810_05212	60.5	0.00000000238	N/A	N/A