UHGV-0177977 (vOTU-064213)

Viral Genome: UHGV-0177977

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0177977
vOTU ID	vOTU-064213
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_580470
Associated BioSample	SAMN09781779
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	84.13 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	14
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9659
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	37.4
Jumbo phage	No

Genome content
Genome length (bp)	31,630
GC content	47.79%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	49
CDS density	96%
Average CDS length (bps)	616.78
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 84.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0177977_1	UniRef90_R6SEH3	95.1	2.14e-20	TPR Domain containing protein	N/A
eggNOG-mapper	UHGV-0177977_1	1120746.CCNL01000013_gene1996	60.1	0.0000000321	N/A	N/A
structural_annotation	UHGV-0177977_1	PF18768,MF_00994,NF008756,COG5010	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_2	K01356	89.2	8.2e-26	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0177977_2	phrog_4	120.8	1.3e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-0177977_2	UniRef90_UPI001D06195E	351.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0177977_2	1160721.RBI_II00559	273.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0177977_2	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
Pfam	UHGV-0177977_2	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0177977_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0177977_2	PF00717,PF01381,MF_00015,NF041951,NF007621,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_3	phrog_130	149.1	2.94273e-44	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0177977_3	UniRef90_UPI000F52F993	187.0	0	BRO family protein	N/A
eggNOG-mapper	UHGV-0177977_3	445972.ANACOL_00517	184.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0177977_3	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0177977_3	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0177977_3	PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_4	phrog_5671	107.2	1.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0177977_4	696281.Desru_1771	112.0	2.88e-30	N/A	N/A
KOfam	UHGV-0177977_8	K23779	65.3	1.4e-18	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0177977_8	phrog_5823	53.0	0.0000000000000053	transcriptional regulator	transcription regulation
UniRef90	UHGV-0177977_8	UniRef90_UPI001D05C8BC	121.0	5.04e-35	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0177977_8	716541.ECL_03959	55.5	0.0000000167	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-0177977_8	retron_type_VI_hth_cluster2_1	42.8	0.000000000016	N/A	Retron
Pfam	UHGV-0177977_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0177977_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0177977_8	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0177977_9	cluster_158759	89.0	3e-27	NA	N/A
PHROG	UHGV-0177977_10	phrog_310	375.0	0	transposase	integration and excision
UniRef90	UHGV-0177977_10	UniRef90_UPI001D0737BD	1301.0	0	Mu transposase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0177977_10	1160721.RBI_II00555	994.0	0	Mu transposase, C-terminal	N/A
PADLOC	UHGV-0177977_10	TnsB_0_V-K	64.9	4.7e-19	TnsB_0_V-K	CRISPR-CAS
Pfam	UHGV-0177977_10	PF09039	N/A	N/A	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
Pfam	UHGV-0177977_10	PF02914	N/A	N/A	Bacteriophage Mu transposase	DDE_2
Pfam	UHGV-0177977_10	PF09299	N/A	N/A	Mu transposase, C-terminal	Mu-transpos_C
COG	UHGV-0177977_10	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0177977_10	PF02914,PF09039,PF09299,PF21531,NF033594,TIGR01764,COG3316,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_11	K07132	64.8	1.3e-18	MuB; ATP-dependent target DNA activator	N/A
PHROG	UHGV-0177977_11	phrog_296	127.9	9.4e-38	DNA transposition protein	integration and excision
UniRef90	UHGV-0177977_11	UniRef90_UPI001D0672F9	595.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0177977_11	1160721.RBI_II00554	374.0	0	AAA domain	N/A
Pfam	UHGV-0177977_11	PF13401	N/A	N/A	AAA domain	AAA_22
COG	UHGV-0177977_11	COG2842	N/A	N/A	Bacteriophage DNA transposition protein, AAA+ family ATPase	N/A
structural_annotation	UHGV-0177977_11	PF13401,MF_01407,TIGR03015,COG2842	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_13	K06284	45.5	0.0000000000013	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0177977_13	phrog_4681	43.9	0.000000000003	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0177977_13	UniRef90_UPI001D06158D	169.0	0	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0177977_13	1160721.RBI_II00552	89.0	3.33e-22	SpoVT / AbrB like domain	N/A
Pfam	UHGV-0177977_13	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
COG	UHGV-0177977_13	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0177977_13	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177977_14	1160721.RBI_II00551	214.0	0	N/A	N/A
AcrCatalog	UHGV-0177977_14	cluster_71843	214.0	0	NA	N/A
PHROG	UHGV-0177977_15	phrog_286	50.1	0.000000000000056	N/A	unknown function
UniRef90	UHGV-0177977_15	UniRef90_UPI001D09810E	326.0	0	regulatory protein GemA	N/A
eggNOG-mapper	UHGV-0177977_15	1160721.RBI_II00550	189.0	0	N/A	N/A
Pfam	UHGV-0177977_15	PF06252	N/A	N/A	Bacteriophage Mu, GemA protein	GemA
structural_annotation	UHGV-0177977_15	PF06252	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_16	phrog_836	66.7	3.6e-19	late transcriptional activator	transcription regulation
UniRef90	UHGV-0177977_16	UniRef90_UPI001D08EE88	216.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0177977_16	1160721.RBI_II00549	115.0	8.18e-32	Mor transcription activator	N/A
Pfam	UHGV-0177977_16	PF08765	N/A	N/A	Mor transcription activator family	Mor
COG	UHGV-0177977_16	COG5566	N/A	N/A	Transcriptional regulator, middle operon regulator (Mor) family	N/A
structural_annotation	UHGV-0177977_16	PF08765,COG5566	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_17	phrog_462	40.9	0.000000000034	lipoprotein	other
eggNOG-mapper	UHGV-0177977_17	1160721.RBI_II00548	89.0	4.45e-22	N/A	N/A
PHROG	UHGV-0177977_18	phrog_25462	113.0	1.4e-33	N/A	unknown function
UniRef90	UHGV-0177977_18	UniRef90_UPI001D071891	209.0	0	type VI secretion protein	N/A
eggNOG-mapper	UHGV-0177977_18	1160721.RBI_II00547	182.0	0	N/A	N/A
structural_annotation	UHGV-0177977_18	PF01638,MF_01819,NF002926,COG1733	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_19	phrog_426	96.1	4.9e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0177977_19	UniRef90_UPI001D05DC57	350.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177977_19	1160721.RBI_II00546	274.0	0	N/A	N/A
Pfam	UHGV-0177977_19	PF11985	N/A	N/A	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
structural_annotation	UHGV-0177977_19	PF11985	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_20	K02601	78.5	9.3e-23	nusG; transcription termination/antitermination protein NusG	N/A
PHROG	UHGV-0177977_20	phrog_6386	73.8	2.3e-21	transcription antiterminator	transcription regulation
UniRef90	UHGV-0177977_20	UniRef90_UPI000F5398E7	186.0	0	transcription termination/antitermination NusG family protein	N/A
eggNOG-mapper	UHGV-0177977_20	1160721.RBI_II00545	176.0	0	Transcription termination factor nusG	N/A
Pfam	UHGV-0177977_20	PF02357	N/A	N/A	Transcription termination factor nusG	NusG
COG	UHGV-0177977_20	COG0250	N/A	N/A	Transcription termination/antitermination protein NusG	N/A
structural_annotation	UHGV-0177977_20	PF02357,MF_00951,NF033641,COG0250	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_21	phrog_309	56.0	7.9e-16	terminase small subunit	head and packaging
UniRef90	UHGV-0177977_21	UniRef90_W0U9H3	239.0	0	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0177977_21	1160721.RBI_II00544	239.0	0	N/A	N/A
structural_annotation	UHGV-0177977_21	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_22	K06909	78.4	9.4e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0177977_22	phrog_2	76.9	3.7e-22	terminase large subunit	head and packaging
UniRef90	UHGV-0177977_22	UniRef90_UPI001D069476	914.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0177977_22	1160721.RBI_II00543	770.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0177977_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0177977_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0177977_22	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_23	phrog_533	297.5	0	portal protein	head and packaging
UniRef90	UHGV-0177977_23	UniRef90_UPI001D092AED	999.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0177977_23	1160721.RBI_II00542	831.0	0	N/A	N/A
structural_annotation	UHGV-0177977_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_24	phrog_581	313.3	0	minor head protein	head and packaging
UniRef90	UHGV-0177977_24	UniRef90_W0U9J3	846.0	0	Phage minor capsid protein (Glycoside Hydrolase Family 25 protein )	N/A
eggNOG-mapper	UHGV-0177977_24	1160721.RBI_II00541	846.0	0	N/A	N/A
Pfam	UHGV-0177977_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0177977_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177977_24	PF06152,PF12636	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_27	phrog_194	95.6	6.4e-28	head scaffolding protein	head and packaging
UniRef90	UHGV-0177977_27	UniRef90_UPI001D08023A	295.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0177977_27	1408437.JNJN01000045_gene593	80.1	3.47e-16	Phage minor structural protein GP20	N/A
Pfam	UHGV-0177977_27	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0177977_27	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_28	phrog_422	240.6	0	major head protein	head and packaging
UniRef90	UHGV-0177977_28	UniRef90_W0U896	508.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0177977_28	1160721.RBI_II00538	508.0	0	N/A	N/A
structural_annotation	UHGV-0177977_28	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_29	phrog_3281	44.7	0.0000000000023	endonuclease VII	DNA, RNA and nucleotide metabolism
PHROG	UHGV-0177977_30	phrog_541	69.0	5.8e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0177977_30	642492.Clole_0822	79.7	9.06e-18	N/A	N/A
Pfam	UHGV-0177977_31	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0177977_31	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_32	phrog_556	108.4	4e-32	minor head protein	head and packaging
UniRef90	UHGV-0177977_32	UniRef90_UPI001D06F225	244.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0177977_32	1160721.RBI_II00534	172.0	0	Minor capsid protein	N/A
Pfam	UHGV-0177977_32	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0177977_32	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_33	phrog_3266	89.7	2.6e-26	tail completion	connector
UniRef90	UHGV-0177977_33	UniRef90_UPI001C86C58C	71.2	0.000000000000479	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0177977_33	1160721.RBI_II00533	198.0	0	N/A	N/A
structural_annotation	UHGV-0177977_33	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_34	phrog_3099	137.7	6.29996e-41	N/A	unknown function
eggNOG-mapper	UHGV-0177977_34	1160721.RBI_II00532	224.0	0	N/A	N/A
structural_annotation	UHGV-0177977_34	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_35	phrog_11299	106.1	2.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0177977_35	1160721.RBI_II00531	166.0	0	N/A	N/A
structural_annotation	UHGV-0177977_35	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_36	phrog_706	125.3	4.7e-37	N/A	unknown function
UniRef90	UHGV-0177977_36	UniRef90_UPI001D078E13	377.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0177977_36	1449050.JNLE01000003_gene3882	185.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0177977_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0177977_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_37	phrog_1535	392.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0177977_37	UniRef90_W0U887	598.0	0	Putative minor tail protein	N/A
eggNOG-mapper	UHGV-0177977_37	1160721.RBI_II00528	598.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0177977_37	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
structural_annotation	UHGV-0177977_37	PF20155,TIGR01760,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_38	phrog_1194	78.4	7.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-0177977_38	1160721.RBI_II00527	157.0	0	N/A	N/A
structural_annotation	UHGV-0177977_38	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177977_39	1160721.RBI_II00526	331.0	0	N/A	N/A
structural_annotation	UHGV-0177977_39	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0177977_43	phrog_13256	75.5	3.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-0177977_43	1160721.RBI_II00522	78.6	1.22e-18	N/A	N/A
KOfam	UHGV-0177977_45	K07273	171.5	0	acm; lysozyme	N/A
PHROG	UHGV-0177977_45	phrog_291	149.4	2.66247e-44	endolysin	lysis
UniRef90	UHGV-0177977_45	UniRef90_UPI001D06C0C4	224.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0177977_45	1160721.RBI_I01563	216.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0177977_45	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0177977_45	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0177977_45	PF01183,PF01471,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_47	K06223	214.1	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0177977_47	phrog_56	198.0	0	DNA methyltransferase	other
UniRef90	UHGV-0177977_47	UniRef90_UPI001D065303	468.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0177977_47	1160721.RBI_II00519	440.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0177977_47	MTase_II_00039	132.8	5.9e-39	Type II methyltransferase	RM
Pfam	UHGV-0177977_47	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0177977_47	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0177977_47	PF02086,MF_00934,TIGR00571,COG0338	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_48	K07727	66.3	7.7e-19	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0177977_48	phrog_3	47.8	0.00000000000059	transcriptional repressor	transcription regulation
UniRef90	UHGV-0177977_48	UniRef90_UPI001D089C78	112.0	2.66e-31	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0177977_48	1160721.RBI_II00518	67.4	0.000000000000029	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0177977_48	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0177977_48	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0177977_48	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0177977_49	K18908	202.5	0	mepA; multidrug efflux pump	N/A
PHROG	UHGV-0177977_49	phrog_6241	310.9	0	N/A	unknown function
UniRef90	UHGV-0177977_49	UniRef90_UPI001D07B8BA	755.0	0	MATE family efflux transporter	N/A
eggNOG-mapper	UHGV-0177977_49	33035.JPJF01000009_gene1418	469.0	0	N/A	N/A
Pfam	UHGV-0177977_49	PF01554	N/A	N/A	MatE	MatE
NCBIFam	UHGV-0177977_49	TIGR00797.1	N/A	N/A	MATE family efflux transporter	N/A
COG	UHGV-0177977_49	COG0534	N/A	N/A	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	N/A
structural_annotation	UHGV-0177977_49	PF03023,MF_00400,NF041801,COG0534	N/A	N/A	N/A	N/A