UHGV-0178196 (vOTU-063767)

Viral Genome: UHGV-0178196

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0178196
vOTU ID	vOTU-063767
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_583180
Associated BioSample	SAMN09781767
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	98.36 (High-quality)
Trimmed provirus	No
CheckV viral markers	10
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9804
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	28.88
Jumbo phage	No

Genome content
Genome length (bp)	39,560
GC content	53.48%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	62
CDS density	91%
Average CDS length (bps)	581.95
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0178196_1	1033743.CAES01000078_gene3736	59.3	0.00000000176	Flagellar Assembly Protein A	N/A
COG	UHGV-0178196_1	COG1315	N/A	N/A	Flagellar assembly protein FapA, interacts with EIIAGlc	N/A
eggNOG-mapper	UHGV-0178196_2	596152.DesU5LDRAFT_1910	92.4	1.51e-20	N/A	N/A
structural_annotation	UHGV-0178196_2	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_3	phrog_1468	52.1	0.0000000000000073	transcriptional repressor	transcription regulation
UniRef90	UHGV-0178196_3	UniRef90_A0A3Q0NDY7	48.5	0.0000062	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0178196_3	386043.lwe1198	47.0	0.00000421	Helix-turn-helix	N/A
Pfam	UHGV-0178196_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0178196_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0178196_4	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0178196_5	K22300	53.1	0.000000000000008	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0178196_5	phrog_8	44.4	0.0000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-0178196_5	UniRef90_A0A3D3Y6C1	70.9	0.00000000000000924	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0178196_5	1095737.HMPREF1110_1418	54.3	0.0000000135	sequence-specific DNA binding	N/A
Pfam	UHGV-0178196_5	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0178196_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0178196_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178196_6	NF007257,COG1396	N/A	N/A	N/A	N/A
Pfam	UHGV-0178196_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0178196_8	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0178196_9	K14059	153.6	2.8026e-45	int; integrase	N/A
PHROG	UHGV-0178196_9	phrog_1	148.5	6.16571e-44	integrase	integration and excision
UniRef90	UHGV-0178196_9	UniRef90_A0A3D2HVQ9	288.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0178196_9	411467.BACCAP_00889	80.5	0.0000000000000508	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0178196_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0178196_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0178196_9	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178196_10	1378168.N510_03079	60.1	0.0000000116	N/A	N/A
structural_annotation	UHGV-0178196_13	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_14	phrog_14030	137.8	7.59994e-41	N/A	unknown function
UniRef90	UHGV-0178196_14	UniRef90_UPI00164AB959	152.0	1.29998e-41	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0178196_14	887325.HMPREF0381_0057	145.0	2.02e-39	Putative cell wall binding repeat	N/A
COG	UHGV-0178196_14	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-0178196_15	phrog_443	62.3	1.5e-17	holin	lysis
UniRef90	UHGV-0178196_15	UniRef90_UPI0009B98E42	94.4	4.11e-24	holin	N/A
eggNOG-mapper	UHGV-0178196_15	1235797.C816_04172	89.4	6.29e-23	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0178196_15	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0178196_15	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_16	phrog_937	58.5	1.5e-16	hemolysin	other
eggNOG-mapper	UHGV-0178196_16	1519439.JPJG01000023_gene533	52.0	0.000000261	N/A	N/A
UniRef90	UHGV-0178196_17	UniRef90_A0A1C6H462	433.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0178196_17	1408437.JNJN01000060_gene452	377.0	0	heme binding	N/A
Pfam	UHGV-0178196_17	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
COG	UHGV-0178196_17	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
eggNOG-mapper	UHGV-0178196_18	693746.OBV_01600	89.7	1.2e-16	N/A	N/A
eggNOG-mapper	UHGV-0178196_19	1235797.C816_04174	140.0	1.42e-39	N/A	N/A
UniRef90	UHGV-0178196_21	UniRef90_UPI00051B4A1C	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0178196_21	1519439.JPJG01000060_gene1894	167.0	0	N/A	N/A
COG	UHGV-0178196_21	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0178196_21	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178196_22	411473.RUMCAL_00420	61.6	0.000000129	nuclear chromosome segregation	N/A
COG	UHGV-0178196_22	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0178196_23	phrog_156	137.8	5.79997e-41	portal protein	head and packaging
eggNOG-mapper	UHGV-0178196_23	693746.OBV_01670	598.0	0	N/A	N/A
structural_annotation	UHGV-0178196_23	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178196_25	UniRef90_A0A4D7ASB8	514.0	0	N/A	N/A
eggNOG-mapper	UHGV-0178196_25	693746.OBV_01680	505.0	0	N/A	N/A
structural_annotation	UHGV-0178196_25	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_26	phrog_422	149.4	2.38221e-44	major head protein	head and packaging
UniRef90	UHGV-0178196_26	UniRef90_A0A6A8VJ17	326.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0178196_26	1408437.JNJN01000001_gene1710	236.0	0	N/A	N/A
Pfam	UHGV-0178196_26	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0178196_26	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178196_27	755731.Clo1100_2435	67.4	0.000000000495	N/A	N/A
eggNOG-mapper	UHGV-0178196_28	693746.OBV_01730	72.8	0.0000000000000158	N/A	N/A
structural_annotation	UHGV-0178196_28	PF11650	N/A	N/A	N/A	N/A
KOfam	UHGV-0178196_29	K06909	141.3	8.89965e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0178196_29	phrog_979	121.9	1.4e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0178196_29	UniRef90_G4KR97	545.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0178196_29	693746.OBV_01690	545.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0178196_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0178196_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0178196_29	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178196_31	1304866.K413DRAFT_4686	77.8	2.46e-18	N/A	N/A
eggNOG-mapper	UHGV-0178196_32	1160721.RBI_I00206	56.6	0.000000000402	N/A	N/A
structural_annotation	UHGV-0178196_32	PF10723	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178196_34	1235802.C823_02864	63.5	0.000000000000349	N/A	N/A
structural_annotation	UHGV-0178196_35	PF03869,NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_36	phrog_15863	162.4	0	N/A	unknown function
UniRef90	UHGV-0178196_36	UniRef90_A0A1Y3R3M0	235.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0178196_36	693746.OBV_01780	169.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0178196_36	PF00226	N/A	N/A	DnaJ domain	DnaJ
COG	UHGV-0178196_36	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0178196_38	PF17917	N/A	N/A	N/A	N/A
KOfam	UHGV-0178196_39	K01520	149.9	2.10195e-44	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0178196_39	phrog_135	136.6	1.4e-40	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178196_39	UniRef90_A0A3D3Y5Q7	235.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0178196_39	887929.HMP0721_1278	142.0	5.65004e-42	dUTPase	N/A
Pfam	UHGV-0178196_39	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0178196_39	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0178196_39	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0178196_39	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_41	phrog_1770	54.9	0.000000000000002	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0178196_41	536233.CLO_1822	149.0	1.34525e-43	N/A	N/A
structural_annotation	UHGV-0178196_41	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178196_42	UniRef90_A0A1C6DFA0	192.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0178196_42	935948.KE386495_gene2250	102.0	7.06e-25	N/A	N/A
Pfam	UHGV-0178196_42	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0178196_42	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_45	phrog_599	42.0	0.000000000021	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0178196_45	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0178196_45	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0178196_45	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_48	phrog_38832	62.6	1.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0178196_48	665956.HMPREF1032_00143	68.2	0.0000000000042	N/A	N/A
structural_annotation	UHGV-0178196_48	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_49	phrog_4019	73.1	3.3e-21	N/A	unknown function
UniRef90	UHGV-0178196_50	UniRef90_UPI001C10265C	97.8	4.91e-24	N/A	N/A
Pfam	UHGV-0178196_50	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0178196_50	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_52	phrog_15768	98.9	8.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0178196_52	742740.HMPREF9474_03117	105.0	2.7e-24	N/A	N/A
structural_annotation	UHGV-0178196_52	PF01978,MF_01819,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0178196_53	K03111	123.0	4.4e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0178196_53	phrog_44	135.2	5e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178196_53	UniRef90_UPI001C02B0E9	174.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0178196_53	445972.ANACOL_00151	169.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0178196_53	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0178196_53	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0178196_53	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0178196_53	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0178196_53	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_55	phrog_7370	56.2	5.9e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178196_55	UniRef90_A0A3D1LDS4	154.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0178196_55	1232449.BAHV02000016_gene1841	85.1	3.24e-20	HNH nucleases	N/A
Pfam	UHGV-0178196_55	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0178196_56	phrog_72	74.5	1.4e-21	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178196_56	UniRef90_A0A8D9PDS2	163.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0178196_56	445972.ANACOL_01825	162.0	0	N/A	N/A
Pfam	UHGV-0178196_56	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0178196_56	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178196_57	UniRef90_B0PAM4	142.0	1.37e-39	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0178196_57	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0178196_58	phrog_659	43.7	0.0000000000035	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178196_58	UniRef90_A0A6N9QJT6	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0178196_58	33035.JPJF01000135_gene5082	134.0	9.65e-37	N/A	N/A
Pfam	UHGV-0178196_58	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0178196_58	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
Pfam	UHGV-0178196_59	PF09466	N/A	N/A	Hypothetical protein Yqai	Yqai
PHROG	UHGV-0178196_60	phrog_4973	70.5	2.4e-20	N/A	unknown function
UniRef90	UHGV-0178196_60	UniRef90_UPI001D0904CC	81.3	1.06e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0178196_60	1072685.IX83_07155	60.1	0.0000000000301	Helix-turn-helix domain	N/A
Pfam	UHGV-0178196_60	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0178196_60	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A