UHGV-0180092 (vOTU-088553)

Viral Genome: UHGV-0180092

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0180092
vOTU ID	vOTU-088553
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_580759
Associated BioSample	SAMN09781734
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	67.07 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	18
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9815
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	44.66
Jumbo phage	No

Genome content
Genome length (bp)	24,919
GC content	40.01%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	42
CDS density	96%
Average CDS length (bps)	570.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.07)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0180092_1	phrog_6969	88.1	1.2e-25	N/A	unknown function
UniRef90	UHGV-0180092_1	UniRef90_UPI0011C34505	107.0	6.34e-26	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0180092_1	1232446.BAIE02000002_gene816	120.0	3.01e-32	N/A	N/A
Pfam	UHGV-0180092_1	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-0180092_1	PF05584,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_2	phrog_4973	63.4	3.6e-18	N/A	unknown function
UniRef90	UHGV-0180092_2	UniRef90_UPI00164C43FE	71.2	0.00000000000001	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0180092_2	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0180092_2	PF14090,TIGR00373,COG5625	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_3	phrog_190	127.0	1.4e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180092_3	UniRef90_A0A7X9CKX4	124.0	4.07e-34	N/A	N/A
eggNOG-mapper	UHGV-0180092_3	293826.Amet_2598	114.0	3.45e-31	N/A	N/A
Pfam	UHGV-0180092_3	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0180092_3	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_4	phrog_7566	65.4	7.6e-19	N/A	unknown function
PHROG	UHGV-0180092_5	phrog_72	61.4	2e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0180092_5	1304866.K413DRAFT_1197	82.8	7.63e-18	N/A	N/A
structural_annotation	UHGV-0180092_5	PF05772,NF007281	N/A	N/A	N/A	N/A
KOfam	UHGV-0180092_6	K03111	138.3	8.99998e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0180092_6	phrog_44	144.8	4.90454e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180092_6	UniRef90_A0A4S2F9D9	133.0	2.36e-37	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0180092_6	1235796.C815_00133	128.0	4.53e-36	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0180092_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0180092_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0180092_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0180092_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0180092_6	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_7	phrog_298	77.5	1.3e-22	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180092_7	UniRef90_A0A843HPP6	151.0	7.02051e-43	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-0180092_7	1399942.U3PDT7_9CAUD	209.0	0	nuclease activity	N/A
structural_annotation	UHGV-0180092_7	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_8	phrog_6244	106.0	3.5e-31	N/A	unknown function
UniRef90	UHGV-0180092_8	UniRef90_A0A7W3SYY9	56.2	0.0000000426	Putative phage-related endonuclease	N/A
COG	UHGV-0180092_8	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0180092_8	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180092_9	PF19157	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_11	phrog_2324	91.4	8.1e-27	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180092_11	UniRef90_A0A366DNY1	79.0	0.0000000000000149	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-0180092_11	1399942.U3PCT3_9CAUD	67.4	0.0000000000454	N/A	N/A
Pfam	UHGV-0180092_11	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0180092_11	PF04404	N/A	N/A	N/A	N/A
KOfam	UHGV-0180092_13	K18830	45.4	0.0000000000019	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0180092_13	phrog_3	41.7	0.000000000046	transcriptional repressor	transcription regulation
UniRef90	UHGV-0180092_13	UniRef90_A0A2V2EPJ7	52.8	0.000000121	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0180092_13	580327.Tthe_0273	47.0	0.00000306	Transcriptional	N/A
PADLOC	UHGV-0180092_13	retron_type_VI_hth_cluster2_1	42.8	0.000000000017	N/A	Retron
Pfam	UHGV-0180092_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0180092_13	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0180092_13	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0180092_14	K14056	63.0	5.9e-18	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-0180092_14	phrog_1373	52.6	0.0000000000000065	transcriptional regulator	transcription regulation
UniRef90	UHGV-0180092_14	UniRef90_R6AML4	82.8	3.13e-18	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0180092_14	224719.Abm4_1037	61.2	0.00000000012	IrrE N-terminal-like domain	N/A
PADLOC	UHGV-0180092_14	retron_type_VI_hth_cluster2_1	58.5	1.6e-16	N/A	Retron
Pfam	UHGV-0180092_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0180092_14	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0180092_14	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0180092_16	K06400	306.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0180092_16	phrog_95	332.9	0	integrase	integration and excision
UniRef90	UHGV-0180092_16	UniRef90_UPI0011073ABB	253.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0180092_16	1235799.C818_04182	221.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0180092_16	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0180092_16	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0180092_16	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0180092_16	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0180092_16	PF07508,PF00239,PF18822,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_17	phrog_372	294.5	0	tail protein	tail
UniRef90	UHGV-0180092_17	UniRef90_A0A4D6B7C6	169.0	3.69943e-42	Capsid and scaffold protein	N/A
eggNOG-mapper	UHGV-0180092_17	1123315.AUIP01000001_gene1436	169.0	6.20775e-43	N/A	N/A
Pfam	UHGV-0180092_17	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0180092_17	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_18	phrog_1067	342.8	0	minor head protein	head and packaging
UniRef90	UHGV-0180092_18	UniRef90_A0A2P1CCB3	589.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0180092_18	1399942.U3PFX4_9CAUD	582.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0180092_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0180092_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0180092_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0180092_19	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0180092_19	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180092_20	1158614.I592_02413	47.8	0.00001	N/A	N/A
structural_annotation	UHGV-0180092_22	NF033677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180092_25	910314.HMPREF9220_1078	55.1	0.000000035	N/A	N/A
structural_annotation	UHGV-0180092_25	PF08481,NF032891,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180092_27	1399942.U3PDS7_9CAUD	115.0	6.91e-32	N/A	N/A
structural_annotation	UHGV-0180092_27	PF08481,NF032891,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_28	phrog_33	67.8	3e-19	distal tail protein Dit	tail
UniRef90	UHGV-0180092_28	UniRef90_A0A075KJA3	284.0	0	Putative tail component	N/A
eggNOG-mapper	UHGV-0180092_28	1399942.U3PIW9_9CAUD	288.0	0	Phage tail protein	N/A
structural_annotation	UHGV-0180092_28	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_29	phrog_6900	254.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0180092_29	536233.CLO_1577	266.0	0	tape measure	N/A
COG	UHGV-0180092_29	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0180092_30	phrog_2115	52.3	0.000000000000013	tail protein	tail
eggNOG-mapper	UHGV-0180092_30	1399942.U3PCS7_9CAUD	130.0	1.34e-37	N/A	N/A
structural_annotation	UHGV-0180092_30	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_31	phrog_88	114.1	1.1e-33	major tail protein	tail
UniRef90	UHGV-0180092_31	UniRef90_A0A075KJR8	240.0	0	Putative major tail protein	N/A
eggNOG-mapper	UHGV-0180092_31	1399942.U3PBH4_9CAUD	242.0	0	N/A	N/A
NCBIFam	UHGV-0180092_31	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0180092_31	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_32	phrog_78	53.0	0.0000000000000077	tail terminator	connector
UniRef90	UHGV-0180092_32	UniRef90_UPI0005D10765	66.2	0.00000000000904	N/A	N/A
eggNOG-mapper	UHGV-0180092_32	1399942.U3PDS3_9CAUD	131.0	3.13e-38	N/A	N/A
structural_annotation	UHGV-0180092_32	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0180092_33	UniRef90_A0A843HUI9	140.0	3.62999e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0180092_33	508419.F8J166_9CAUD	137.0	1.55e-39	N/A	N/A
structural_annotation	UHGV-0180092_33	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_34	phrog_25	51.0	0.000000000000027	head closure Hc1	connector
UniRef90	UHGV-0180092_34	UniRef90_A0A843I196	139.0	1.15999e-40	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0180092_34	508419.F8J165_9CAUD	116.0	2.21e-32	Phage head-tail joining protein	N/A
Pfam	UHGV-0180092_34	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0180092_34	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0180092_34	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_35	phrog_40	46.6	0.00000000000049	head-tail adaptor Ad1	connector
UniRef90	UHGV-0180092_35	UniRef90_A0A6P1MNU9	122.0	3.55e-34	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0180092_35	508419.F8J164_9CAUD	119.0	5.18e-34	N/A	N/A
NCBIFam	UHGV-0180092_35	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0180092_35	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_36	phrog_6865	60.4	2.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0180092_36	1399942.U3PBG9_9CAUD	52.4	0.0000000125	N/A	N/A
structural_annotation	UHGV-0180092_36	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_37	phrog_10	196.7	0	major head protein	head and packaging
UniRef90	UHGV-0180092_37	UniRef90_A0A075KK19	491.0	0	Putative major head protein	N/A
eggNOG-mapper	UHGV-0180092_37	1399942.U3PDR8_9CAUD	498.0	0	peptidase activity	N/A
Pfam	UHGV-0180092_37	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0180092_37	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0180092_37	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0180092_38	K06904	101.4	1.3e-29	N/A	N/A
PHROG	UHGV-0180092_38	phrog_80	122.5	5.2e-36	head maturation protease	head and packaging
UniRef90	UHGV-0180092_38	UniRef90_A0A843HVM4	238.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0180092_38	508419.F8J161_9CAUD	207.0	0	peptidase activity	N/A
Pfam	UHGV-0180092_38	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0180092_38	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
structural_annotation	UHGV-0180092_38	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_39	phrog_12	179.3	0	portal protein	head and packaging
UniRef90	UHGV-0180092_39	UniRef90_A0A843HZ12	563.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0180092_39	1399942.U3PFW0_9CAUD	531.0	0	Phage portal protein	N/A
Pfam	UHGV-0180092_39	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0180092_39	TIGR01537.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0180092_39	PF04860,PF08184,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_40	phrog_9	281.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0180092_40	UniRef90_A0A075KKZ0	890.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0180092_40	508419.F8J159_9CAUD	894.0	0	Phage Terminase	N/A
Pfam	UHGV-0180092_40	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0180092_40	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-0180092_40	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0180092_41	phrog_13845	184.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0180092_41	1399942.U3PDR2_9CAUD	164.0	0	N/A	N/A
structural_annotation	UHGV-0180092_41	PF05119,COG3747	N/A	N/A	N/A	N/A