UHGV-0180269 (vOTU-106732)

Viral Genome: UHGV-0180269

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0180269
vOTU ID	vOTU-106732
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_578127
Associated BioSample	SAMN07501332
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.36 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	22
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9764
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	45.97
Jumbo phage	No

Genome content
Genome length (bp)	31,354
GC content	30.90%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	94%
Average CDS length (bps)	613.69
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0180269_1	1280689.AUJC01000003_gene983	88.2	1.56e-20	n-acetylmuramoyl-l-alanine amidase	N/A
COG	UHGV-0180269_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
PHROG	UHGV-0180269_2	phrog_199	107.5	1.3e-31	holin	lysis
UniRef90	UHGV-0180269_2	UniRef90_A0A1C6KXX7	219.0	0	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0180269_2	1280689.AUJC01000003_gene982	263.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0180269_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0180269_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0180269_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0180269_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
NCBIFam	UHGV-0180269_3	NF040910.1	N/A	N/A	CD1375 family protein	N/A
PHROG	UHGV-0180269_5	phrog_19567	68.9	5e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-0180269_5	1280689.AUJC01000003_gene979	1632.0	0	N/A	N/A
PHROG	UHGV-0180269_6	phrog_6616	76.2	3.2e-22	tail protein	tail
eggNOG-mapper	UHGV-0180269_6	1280689.AUJC01000003_gene978	1619.0	0	Phage minor structural protein	N/A
COG	UHGV-0180269_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0180269_6	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_7	phrog_1194	126.7	9.3e-38	N/A	unknown function
eggNOG-mapper	UHGV-0180269_7	1280689.AUJC01000003_gene977	226.0	0	N/A	N/A
Pfam	UHGV-0180269_7	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0180269_7	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_8	phrog_31409	384.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0180269_8	UniRef90_A0A7Z7G584	298.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0180269_8	1280689.AUJC01000003_gene976	984.0	0	phage tail tape measure protein	N/A
COG	UHGV-0180269_8	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0180269_8	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_9	phrog_2066	49.6	0.000000000000046	N/A	unknown function
eggNOG-mapper	UHGV-0180269_9	1280689.AUJC01000003_gene975	208.0	0	N/A	N/A
PHROG	UHGV-0180269_10	phrog_183	80.4	2.5e-23	tail chaperone protein	tail
UniRef90	UHGV-0180269_10	UniRef90_UPI0006C0E497	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0180269_10	1280689.AUJC01000003_gene974	238.0	0	N/A	N/A
Pfam	UHGV-0180269_10	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0180269_10	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_11	phrog_2546	79.9	3.8e-23	N/A	unknown function
UniRef90	UHGV-0180269_11	UniRef90_A0A0N0P137	88.2	3.37e-19	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0180269_11	1280689.AUJC01000003_gene973	139.0	2.08e-39	N/A	N/A
PHROG	UHGV-0180269_12	phrog_158	82.0	1.1e-23	major tail protein	tail
UniRef90	UHGV-0180269_12	UniRef90_A0A1B8RSU9	283.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0180269_12	1280689.AUJC01000003_gene972	278.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0180269_12	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0180269_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_13	phrog_78	61.5	1.7e-17	tail terminator	connector
eggNOG-mapper	UHGV-0180269_13	1280689.AUJC01000003_gene971	236.0	0	N/A	N/A
structural_annotation	UHGV-0180269_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_14	phrog_5	105.8	4.4e-31	tail completion or Neck1 protein	connector
UniRef90	UHGV-0180269_14	UniRef90_UPI001B3C7E28	288.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0180269_14	1280689.AUJC01000003_gene970	279.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0180269_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0180269_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0180269_14	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_15	phrog_2168	131.0	3.7e-39	N/A	unknown function
eggNOG-mapper	UHGV-0180269_15	1280689.AUJC01000003_gene969	203.0	0	N/A	N/A
structural_annotation	UHGV-0180269_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_16	phrog_132	87.9	7.8e-26	head-tail adaptor	connector
UniRef90	UHGV-0180269_16	UniRef90_UPI000829FFA7	180.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0180269_16	1280689.AUJC01000003_gene968	199.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0180269_16	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0180269_16	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_17	phrog_422	273.2	0	major head protein	head and packaging
UniRef90	UHGV-0180269_17	UniRef90_UPI00189C3164	575.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0180269_17	1280689.AUJC01000003_gene967	372.0	0	N/A	N/A
structural_annotation	UHGV-0180269_17	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_18	phrog_172	168.5	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0180269_18	UniRef90_UPI00189D679E	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-0180269_18	1280689.AUJC01000003_gene966	193.0	0	N/A	N/A
Pfam	UHGV-0180269_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0180269_18	PF14265	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180269_19	931276.Cspa_c26890	77.4	2.59e-17	N/A	N/A
PHROG	UHGV-0180269_20	phrog_115	362.3	0	minor head protein	head and packaging
UniRef90	UHGV-0180269_20	UniRef90_A0A1B8RSU6	988.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0180269_20	1280689.AUJC01000003_gene964	868.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0180269_20	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0180269_20	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0180269_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180269_20	PF15542,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_21	phrog_64	402.7	0	portal protein	head and packaging
UniRef90	UHGV-0180269_21	UniRef90_UPI000EA0DF01	836.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0180269_21	1280689.AUJC01000003_gene963	853.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0180269_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0180269_21	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0180269_21	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0180269_22	K06909	361.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0180269_22	phrog_3717	164.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0180269_22	UniRef90_A0A1B8RSV7	856.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0180269_22	1280689.AUJC01000003_gene962	864.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0180269_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0180269_22	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0180269_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0180269_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0180269_22	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0180269_23	K07474	123.7	2.8e-36	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0180269_23	phrog_51	134.5	5.30001e-40	terminase small subunit	head and packaging
UniRef90	UHGV-0180269_23	UniRef90_UPI0006C08353	244.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0180269_23	1280689.AUJC01000003_gene961	248.0	0	Terminase small subunit	N/A
Pfam	UHGV-0180269_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0180269_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0180269_23	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180269_24	1280689.AUJC01000003_gene960	48.1	0.00000349	N/A	N/A
structural_annotation	UHGV-0180269_24	PF10922,MF_00839	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180269_27	86416.Clopa_0800	55.8	0.000000173	N/A	N/A
PHROG	UHGV-0180269_28	phrog_9628	159.3	0	N/A	unknown function
UniRef90	UHGV-0180269_28	UniRef90_UPI0018986DDA	212.0	0	DNA-binding response regulator	N/A
eggNOG-mapper	UHGV-0180269_28	1121342.AUCO01000012_gene1709	132.0	1.61e-38	N/A	N/A
Pfam	UHGV-0180269_28	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
structural_annotation	UHGV-0180269_28	PF06056,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_29	phrog_38492	54.2	0.0000000000000027	N/A	unknown function
UniRef90	UHGV-0180269_29	UniRef90_UPI000C076F29	90.5	7.43e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0180269_29	536233.CLO_0875	58.5	0.000000000748	Helix-turn-helix	N/A
Pfam	UHGV-0180269_29	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0180269_29	PF04545,MF_00674,NF009180,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0180269_33	K00558	190.6	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0180269_33	phrog_116	211.0	0	DNA methyltransferase	other
UniRef90	UHGV-0180269_33	UniRef90_UPI00189B5A23	636.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0180269_33	1499683.CCFF01000005_gene54	531.0	0	PFAM C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0180269_33	MTase_II_00058	184.2	0	Type II methyltransferase	RM
Pfam	UHGV-0180269_33	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0180269_33	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0180269_33	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0180269_33	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180269_35	NF009256	N/A	N/A	N/A	N/A
KOfam	UHGV-0180269_37	K03111	123.8	2.3e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0180269_37	phrog_44	129.3	3e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180269_37	UniRef90_UPI001B3C54BA	260.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0180269_37	1391647.AVSV01000014_gene451	157.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0180269_37	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0180269_37	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0180269_37	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0180269_37	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0180269_37	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_38	phrog_154	47.0	0.0000000000004	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0180269_38	1196322.A370_02042	59.3	0.000000000423	N/A	N/A
structural_annotation	UHGV-0180269_38	PF17399	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_39	phrog_244	75.8	8e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0180269_39	1280692.AUJL01000044_gene2344	186.0	0	N/A	N/A
structural_annotation	UHGV-0180269_39	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_40	phrog_25509	110.2	9.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0180269_40	1280689.AUJC01000003_gene942	196.0	0	N/A	N/A
PHROG	UHGV-0180269_43	phrog_3497	57.5	8.4e-18	N/A	unknown function
UniRef90	UHGV-0180269_43	UniRef90_UPI001367DC20	162.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0180269_43	1280689.AUJC01000003_gene939	153.0	0	N/A	N/A
structural_annotation	UHGV-0180269_43	COG5126	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_44	phrog_2514	102.3	4.6e-30	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180269_44	UniRef90_A0A1F1L7W3	263.0	0	DnaA_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0180269_44	195103.CPF_0940	156.0	2.24208e-44	Transcriptional regulator	N/A
COG	UHGV-0180269_44	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-0180269_44	PF09681,PF17214,MF_01819,TIGR01714,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_46	phrog_155	152.5	2.8026e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180269_46	UniRef90_UPI000C07C001	377.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0180269_46	386415.NT01CX_2192	210.0	0	ERF superfamily	N/A
Pfam	UHGV-0180269_46	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0180269_46	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0180269_47	phrog_253	159.0	0	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180269_47	UniRef90_UPI001B3C84DE	296.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0180269_47	1499683.CCFF01000014_gene3558	198.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-0180269_47	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0180269_47	PF05565,NF002139	N/A	N/A	N/A	N/A