UHGV-0180998 (vOTU-150660)

Viral Genome: UHGV-0180998

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0180998
vOTU ID	vOTU-150660
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_589814
Associated BioSample	SAMN09781695
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.64 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	7
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9809
Virus hallmark genes (geNomad)	1
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.7
Jumbo phage	No

Genome content
Genome length (bp)	21,918
GC content	55.04%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	90%
Average CDS length (bps)	385.29
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0180998_3	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_5	phrog_13589	188.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0180998_5	428125.CLOLEP_01434	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-0180998_6	742733.HMPREF9469_05008	50.1	0.00000022	N/A	N/A
PHROG	UHGV-0180998_9	phrog_937	46.3	0.0000000000008	hemolysin	other
eggNOG-mapper	UHGV-0180998_9	1519439.JPJG01000023_gene533	65.9	0.00000000000166	N/A	N/A
UniRef90	UHGV-0180998_10	UniRef90_A0A1T5AMW7	100.0	5.43e-23	NAGPA domain-containing protein	N/A
structural_annotation	UHGV-0180998_10	PF09992,COG4632	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_11	phrog_13256	79.6	2.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0180998_11	1226322.HMPREF1545_00132	71.2	0.0000000000000013	N/A	N/A
PHROG	UHGV-0180998_12	phrog_21357	92.1	5.9e-27	endolysin	lysis
UniRef90	UHGV-0180998_12	UniRef90_A0A329UV62	173.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0180998_12	243164.DET1070	166.0	0	SMART Glycoside hydrolase, family 25 subgroup	N/A
Pfam	UHGV-0180998_12	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0180998_12	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0180998_12	PF10030,TIGR02594,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_14	phrog_3754	110.2	1.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-0180998_14	1226322.HMPREF1545_00073	174.0	0	N/A	N/A
PHROG	UHGV-0180998_15	phrog_21718	106.4	2.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0180998_15	397290.C810_05210	72.0	0.0000000000000918	N/A	N/A
PHROG	UHGV-0180998_16	phrog_22984	76.3	3.6e-22	N/A	unknown function
PHROG	UHGV-0180998_17	phrog_16490	140.6	1.99965e-42	N/A	unknown function
eggNOG-mapper	UHGV-0180998_17	1408437.JNJN01000043_gene803	169.0	0	N/A	N/A
PHROG	UHGV-0180998_18	phrog_20016	177.4	0	N/A	unknown function
UniRef90	UHGV-0180998_18	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0180998_18	397290.C810_05214	159.0	0	N/A	N/A
structural_annotation	UHGV-0180998_18	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_19	phrog_28802	53.9	5.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-0180998_20	1232443.BAIA02000078_gene6	54.3	0.0000000827	N/A	N/A
KOfam	UHGV-0180998_21	K06400	274.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0180998_21	phrog_95	293.7	0	integrase	integration and excision
UniRef90	UHGV-0180998_21	UniRef90_A0A3A9I9T1	370.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0180998_21	357809.Cphy_2997	296.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0180998_21	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0180998_21	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0180998_21	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0180998_21	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
COG	UHGV-0180998_23	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0180998_27	PF03885	N/A	N/A	N/A	N/A
KOfam	UHGV-0180998_28	K22300	48.8	0.00000000000015	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0180998_28	phrog_8	50.5	0.000000000000055	transcriptional regulator	transcription regulation
UniRef90	UHGV-0180998_28	UniRef90_A0A212J3J9	66.2	0.0000000000103	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0180998_28	411460.RUMTOR_02056	53.9	0.000000288	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0180998_28	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0180998_28	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0180998_28	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0180998_29	K22300	45.9	0.0000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0180998_29	phrog_8	40.6	0.000000000056	transcriptional regulator	transcription regulation
UniRef90	UHGV-0180998_29	UniRef90_A0A810PZI0	108.0	1.11e-29	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0180998_29	1203606.HMPREF1526_00248	53.5	0.00000000915	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0180998_29	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0180998_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0180998_29	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180998_30	760568.Desku_0919	104.0	2.83e-25	N/A	N/A
structural_annotation	UHGV-0180998_30	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_32	phrog_22529	108.9	3.1e-32	N/A	unknown function
UniRef90	UHGV-0180998_32	UniRef90_A0A352RPR8	153.0	3.08286e-44	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0180998_32	537007.BLAHAN_05080	118.0	2.27e-28	3D domain	N/A
Pfam	UHGV-0180998_32	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0180998_32	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0180998_32	PF06725,MF_02071,NF040670,COG3584	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0180998_33	1160721.RBI_II00485	49.3	0.00000312	N/A	N/A
structural_annotation	UHGV-0180998_33	PF21715,MF_01804,TIGR00281,COG1386	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_36	phrog_7838	150.2	1.54143e-44	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180998_36	UniRef90_A0A8D9UGW3	278.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0180998_36	742767.HMPREF9456_02052	182.0	0	N/A	N/A
structural_annotation	UHGV-0180998_36	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_37	phrog_72	57.5	2.2e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180998_37	UniRef90_A0A2Z4Q9W9	121.0	1.19e-31	NinB	N/A
eggNOG-mapper	UHGV-0180998_37	1507.HMPREF0262_00432	123.0	2.57e-33	N/A	N/A
structural_annotation	UHGV-0180998_37	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_38	phrog_374	183.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180998_38	UniRef90_A0A7W0C2S3	185.0	0	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0180998_38	411462.DORLON_00791	173.0	0	N/A	N/A
structural_annotation	UHGV-0180998_38	PF17375	N/A	N/A	N/A	N/A
KOfam	UHGV-0180998_39	K07451	46.6	0.00000000000066	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0180998_39	phrog_7370	64.4	1.5e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180998_39	UniRef90_R5XZW2	131.0	1.15e-37	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0180998_39	1123058.KB894266_gene1536	56.6	0.000000066	HNH endonuclease	N/A
Pfam	UHGV-0180998_39	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0180998_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0180998_40	K03111	140.2	2.4e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0180998_40	phrog_44	126.9	1.7e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0180998_40	UniRef90_A0A1C7FSG7	156.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0180998_40	1519439.JPJG01000082_gene432	151.0	2.8026e-45	Single-strand binding protein family	N/A
Pfam	UHGV-0180998_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0180998_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0180998_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0180998_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0180998_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_42	phrog_15768	87.5	1.6e-26	N/A	unknown function
UniRef90	UHGV-0180998_42	UniRef90_UPI001959E913	121.0	5.59e-31	N/A	N/A
eggNOG-mapper	UHGV-0180998_42	203119.Cthe_2466	105.0	3.36e-24	N/A	N/A
Pfam	UHGV-0180998_42	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0180998_42	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0180998_43	K00558	93.1	4e-31	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0180998_43	phrog_116	98.7	1.8e-36	DNA methyltransferase	other
UniRef90	UHGV-0180998_43	UniRef90_A0A1Q6RQI3	553.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0180998_43	1235797.C816_01614	433.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-0180998_43	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0180998_43	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0180998_43	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_44	phrog_924	44.3	0.0000000000038	N/A	unknown function
UniRef90	UHGV-0180998_44	UniRef90_A0A2V2EEG3	61.2	0.00000000295	N/A	N/A
eggNOG-mapper	UHGV-0180998_44	411470.RUMGNA_00214	67.0	0.0000000000073	N/A	N/A
Pfam	UHGV-0180998_44	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0180998_45	phrog_38832	63.4	4.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0180998_45	445972.ANACOL_00165	66.2	0.000000000213	N/A	N/A
structural_annotation	UHGV-0180998_45	PF07073	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_46	phrog_3136	145.5	1.49939e-43	N/A	unknown function
UniRef90	UHGV-0180998_46	UniRef90_UPI001CBCD733	171.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0180998_46	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0180998_46	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_47	phrog_1384	128.5	4.8e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0180998_47	665956.HMPREF1032_03086	275.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0180998_47	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0180998_48	PF04570	N/A	N/A	N/A	N/A
PHROG	UHGV-0180998_49	phrog_599	42.6	0.000000000013	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0180998_49	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0180998_49	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0180998_49	PF14354,TIGR03655	N/A	N/A	N/A	N/A