UHGV-0181364 (vOTU-130841)

Viral Genome: UHGV-0181364

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0181364
vOTU ID	vOTU-130841
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMEA1906450_a1_ct71067_vs1@Siphoviridae__sp._ctKwB1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	80.85 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9798
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	21.34
Jumbo phage	No

Genome content
Genome length (bp)	30,797
GC content	36.84%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	41
CDS density	91%
Average CDS length (bps)	685.54
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0181364_1	K14059	220.4	0	int; integrase	N/A
PHROG	UHGV-0181364_1	phrog_1	207.5	0	integrase	integration and excision
UniRef90	UHGV-0181364_1	UniRef90_R6AKI6	818.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-0181364_1	536233.CLO_0855	394.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-0181364_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0181364_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0181364_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0181364_1	PF00589,PF14659,PF14657,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_2	phrog_2695	385.9	0	N/A	unknown function
UniRef90	UHGV-0181364_2	UniRef90_A0A174PBX4	815.0	0	SIR2_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181364_2	1504823.CCMM01000008_gene1082	528.0	0	NAD+ binding	N/A
PADLOC	UHGV-0181364_2	Sirtuin_Blast2	239.4	0	N/A	N/A
Pfam	UHGV-0181364_2	PF13289	N/A	N/A	SIR2-like domain	SIR2_2
COG	UHGV-0181364_2	COG0846	N/A	N/A	NAD-dependent protein deacetylase, SIR2 family	N/A
structural_annotation	UHGV-0181364_2	PF13289	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181364_3	658655.HMPREF0988_00902	48.5	0.000000298	N/A	N/A
UniRef90	UHGV-0181364_4	UniRef90_UPI0006C337A0	230.0	0	tetratricopeptide repeat protein	N/A
eggNOG-mapper	UHGV-0181364_4	2754.EH55_11435	166.0	1.079e-43	cell adhesion	N/A
COG	UHGV-0181364_4	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_5	phrog_20886	53.7	0.0000000000000026	N/A	unknown function
UniRef90	UHGV-0181364_5	UniRef90_UPI0013E038FD	53.1	0.000000137	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0181364_5	861450.HMPREF0080_02020	47.8	0.00000413	N/A	N/A
structural_annotation	UHGV-0181364_5	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_6	phrog_2967	57.4	3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0181364_6	UniRef90_R6A4U7	251.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0181364_6	1235798.C817_00620	97.1	3.8e-24	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0181364_6	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0181364_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0181364_6	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_7	phrog_3	40.4	0.00000000011	transcriptional repressor	transcription regulation
UniRef90	UHGV-0181364_7	UniRef90_UPI000E7391FB	71.2	0.00000000000000964	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0181364_7	1321782.HMPREF1986_02244	58.9	0.000000000144	Helix-turn-helix domain	N/A
Pfam	UHGV-0181364_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0181364_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0181364_8	NF040556	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181364_9	UniRef90_A0A356C6A4	154.0	0	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181364_9	318464.IO99_13850	65.5	0.000000000000379	Helix-turn-helix domain	N/A
Pfam	UHGV-0181364_9	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0181364_9	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0181364_9	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_11	phrog_1499	271.8	0	N/A	unknown function
UniRef90	UHGV-0181364_11	UniRef90_A0A356C6H9	898.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181364_11	742733.HMPREF9469_01850	610.0	0	DNA recombination	N/A
COG	UHGV-0181364_11	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-0181364_11	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_12	phrog_3657	344.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0181364_12	1304866.K413DRAFT_3015	330.0	0	N/A	N/A
PHROG	UHGV-0181364_13	phrog_1227	68.9	7.3e-20	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181364_13	UniRef90_K4ZPW6	65.9	0.00000000000356	N/A	N/A
eggNOG-mapper	UHGV-0181364_13	1304866.K413DRAFT_3016	108.0	3.65e-28	N/A	N/A
Pfam	UHGV-0181364_13	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0181364_13	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
PHROG	UHGV-0181364_14	phrog_533	256.3	0	portal protein	head and packaging
UniRef90	UHGV-0181364_14	UniRef90_A0A413YU90	764.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0181364_14	1282664.H354_06626	450.0	0	N/A	N/A
structural_annotation	UHGV-0181364_14	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_15	phrog_581	252.6	0	minor head protein	head and packaging
UniRef90	UHGV-0181364_15	UniRef90_A0A413YU28	674.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0181364_15	33035.JPJF01000093_gene2255	434.0	0	N/A	N/A
Pfam	UHGV-0181364_15	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0181364_15	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0181364_15	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181364_19	UniRef90_A0A3D5LR66	86.3	1.68e-21	Protein phosphatase	N/A
eggNOG-mapper	UHGV-0181364_19	411902.CLOBOL_03859	75.9	4.58e-18	N/A	N/A
AcrCatalog	UHGV-0181364_19	cluster_13845	76.6	6.86e-23	NA	N/A
UniRef90	UHGV-0181364_20	UniRef90_A0A371IIX7	68.9	0.0000000000000336	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-0181364_20	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_21	phrog_373	183.8	0	anti-repressor	transcription regulation
UniRef90	UHGV-0181364_21	UniRef90_A0A3D5LSU5	462.0	0	Phage regulatory protein	N/A
eggNOG-mapper	UHGV-0181364_21	1499683.CCFF01000014_gene3944	202.0	0	ORF6C domain	N/A
Pfam	UHGV-0181364_21	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0181364_21	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-0181364_21	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0181364_21	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0181364_21	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_23	phrog_2303	147.6	7.9874e-44	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0181364_23	483218.BACPEC_01156	139.0	3.26e-38	N/A	N/A
PHROG	UHGV-0181364_24	phrog_422	260.7	0	major head protein	head and packaging
UniRef90	UHGV-0181364_24	UniRef90_A0A3D5M0U8	505.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0181364_24	663278.Ethha_1589	377.0	0	N/A	N/A
structural_annotation	UHGV-0181364_24	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_25	phrog_541	72.3	6.6e-21	head-tail adaptor	connector
eggNOG-mapper	UHGV-0181364_25	1304866.K413DRAFT_0783	149.0	7.00649e-45	N/A	N/A
PHROG	UHGV-0181364_26	phrog_8710	116.6	1.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-0181364_26	33035.JPJF01000093_gene2249	105.0	5.65e-28	N/A	N/A
structural_annotation	UHGV-0181364_26	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_27	phrog_556	60.3	3e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0181364_27	742740.HMPREF9474_03509	144.0	1.52041e-42	N/A	N/A
PHROG	UHGV-0181364_28	phrog_2595	83.0	3.5e-24	head-tail connector protein	connector
UniRef90	UHGV-0181364_28	UniRef90_UPI001D068DAC	136.0	7.12e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-0181364_28	742740.HMPREF9474_03510	125.0	2.13e-35	N/A	N/A
Pfam	UHGV-0181364_28	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0181364_28	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_29	phrog_820	116.1	2.1e-34	major tail protein	tail
UniRef90	UHGV-0181364_29	UniRef90_T3DDR1	176.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0181364_29	1151292.QEW_2426	176.0	0	N/A	N/A
structural_annotation	UHGV-0181364_29	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_30	phrog_8300	67.0	2.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-0181364_30	1151292.QEW_2425	59.3	0.000000000613	N/A	N/A
structural_annotation	UHGV-0181364_30	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_31	phrog_8355	115.9	8.2e-35	N/A	unknown function
UniRef90	UHGV-0181364_31	UniRef90_UPI0006BBA9AA	174.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0181364_31	1117108.PAALTS15_13522	122.0	1.81e-34	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0181364_31	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0181364_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_32	phrog_1535	228.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0181364_32	UniRef90_A0A1C5PIN9	376.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0181364_32	33035.JPJF01000093_gene2243	328.0	0	phage tail tape measure protein	N/A
COG	UHGV-0181364_32	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0181364_32	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_33	phrog_1194	82.4	4.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0181364_33	33035.JPJF01000093_gene2242	155.0	0	N/A	N/A
structural_annotation	UHGV-0181364_33	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_34	phrog_1401	65.5	8.2e-19	N/A	unknown function
UniRef90	UHGV-0181364_34	UniRef90_UPI0007099B7A	69.7	0.00000000000123	N/A	N/A
eggNOG-mapper	UHGV-0181364_34	1294142.CINTURNW_1705	60.8	0.000000000553	N/A	N/A
structural_annotation	UHGV-0181364_34	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_35	phrog_6616	164.3	0	tail protein	tail
UniRef90	UHGV-0181364_35	UniRef90_A0A356C4L7	750.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181364_35	1232453.BAIF02000058_gene1641	270.0	0	Phage minor structural protein	N/A
COG	UHGV-0181364_35	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0181364_35	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0181364_36	phrog_2566	45.8	0.00000000000095	N/A	unknown function
PHROG	UHGV-0181364_38	phrog_199	71.4	1.2e-20	holin	lysis
UniRef90	UHGV-0181364_38	UniRef90_A0A356C4Q2	240.0	0	Holin	N/A
eggNOG-mapper	UHGV-0181364_38	483218.BACPEC_01140	211.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0181364_38	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0181364_38	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0181364_38	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0181364_38	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0181364_39	K07273	120.4	2.1e-35	acm; lysozyme	N/A
PHROG	UHGV-0181364_39	phrog_291	96.0	5.2e-28	endolysin	lysis
UniRef90	UHGV-0181364_39	UniRef90_A0A356C4L5	701.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0181364_39	515620.EUBELI_01316	166.0	4.2039e-45	Glycoside Hydrolase Family 25-like lysozyme endolysin	N/A
Pfam	UHGV-0181364_39	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0181364_39	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0181364_39	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0181364_39	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0181364_41	K02855	173.7	0	rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS	N/A
PHROG	UHGV-0181364_41	phrog_7620	71.5	9.8e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0181364_41	UniRef90_A0A349AT62	567.0	0	HTH araC/xylS-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0181364_41	515620.EUBELI_01238	507.0	0	helix_turn_helix, arabinose operon control protein	N/A
Pfam	UHGV-0181364_41	PF02311	N/A	N/A	AraC-like ligand binding domain	AraC_binding
Pfam	UHGV-0181364_41	PF12833	N/A	N/A	Helix-turn-helix domain	HTH_18
COG	UHGV-0181364_41	COG2207	N/A	N/A	AraC-type DNA-binding domain and AraC-containing proteins	N/A