UHGV-0181432 (vOTU-069281)

Viral Genome: UHGV-0181432

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0181432
vOTU ID	vOTU-069281
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMEA1906557_a1_ct112452_vs1@Siphoviridae__sp._ctkzE1
Associated BioSample	SAMEA1906557
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	97.51 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	18
CheckV host markers	3
Recoded stop codon	No

Viral Content
geNomad score	0.9807
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	38.43
Jumbo phage	No

Genome content
Genome length (bp)	33,794
GC content	41.50%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	50
CDS density	90%
Average CDS length (bps)	609.30
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0181432_1	phrog_1129	88.0	5.6e-26	holin	lysis
UniRef90	UHGV-0181432_1	UniRef90_A0A893W7Y5	166.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0181432_1	411460.RUMTOR_01325	132.0	3.19e-39	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0181432_1	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0181432_1	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_2	phrog_4105	83.0	3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0181432_2	411459.RUMOBE_00911	147.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-0181432_3	PF20124	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181432_4	UniRef90_UPI00112A1370	109.0	2.64e-26	N/A	N/A
eggNOG-mapper	UHGV-0181432_4	1307436.PBF_04300	89.0	4.74e-19	N/A	N/A
PHROG	UHGV-0181432_5	phrog_16164	135.6	1.2e-40	N/A	unknown function
structural_annotation	UHGV-0181432_5	PF10651,NF032891	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181432_6	PF00041	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181432_7	411462.DORLON_00771	113.0	1.47e-24	N/A	N/A
structural_annotation	UHGV-0181432_7	PF10651,COG3470	N/A	N/A	N/A	N/A
COG	UHGV-0181432_8	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0181432_9	phrog_14030	156.0	0	N/A	unknown function
UniRef90	UHGV-0181432_9	UniRef90_UPI0018999D57	659.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0181432_9	33035.JPJF01000093_gene2240	348.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0181432_9	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0181432_9	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0181432_9	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0181432_9	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_10	phrog_13289	432.9	0	tail protein	tail
UniRef90	UHGV-0181432_10	UniRef90_UPI001570BE36	1249.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0181432_10	1235798.C817_02568	479.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0181432_10	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0181432_10	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0181432_10	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0181432_10	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_11	phrog_33	65.0	1.8e-18	distal tail protein Dit	tail
UniRef90	UHGV-0181432_11	UniRef90_UPI001570C170	471.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0181432_11	1235798.C817_02569	209.0	0	tail component	N/A
NCBIFam	UHGV-0181432_11	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0181432_11	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0181432_11	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_12	phrog_23464	190.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0181432_12	1232452.BAIB02000007_gene1616	404.0	0	phage tail tape measure protein	N/A
COG	UHGV-0181432_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0181432_14	phrog_88	95.1	7.9e-28	major tail protein	tail
UniRef90	UHGV-0181432_14	UniRef90_D4M596	387.0	0	Phage major tail protein, phi13 family	N/A
Pfam	UHGV-0181432_14	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0181432_14	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0181432_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_15	phrog_5	48.3	0.00000000000026	tail completion or Neck1 protein	connector
UniRef90	UHGV-0181432_15	UniRef90_D4M595	235.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0181432_15	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0181432_15	TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181432_16	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181432_17	UniRef90_UPI00189B1559	237.0	0	phage head closure protein	N/A
NCBIFam	UHGV-0181432_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0181432_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_19	phrog_10	77.8	6.9e-23	major head protein	head and packaging
UniRef90	UHGV-0181432_19	UniRef90_UPI00156F222D	729.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0181432_19	1232452.BAIB02000007_gene1625	464.0	0	Phage capsid family	N/A
Pfam	UHGV-0181432_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0181432_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0181432_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0181432_19	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0181432_20	K01358	160.4	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0181432_20	phrog_94	240.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0181432_20	UniRef90_UPI00156EEE56	491.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0181432_20	1232452.BAIB02000007_gene1626	269.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0181432_20	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0181432_20	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0181432_20	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_21	phrog_12	77.5	1.3e-22	portal protein	head and packaging
UniRef90	UHGV-0181432_21	UniRef90_UPI00156D5DC9	739.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0181432_21	1232452.BAIB02000007_gene1627	293.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0181432_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0181432_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0181432_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_22	phrog_9	261.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0181432_22	UniRef90_D4M588	1092.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0181432_22	1232452.BAIB02000007_gene1629	530.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0181432_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0181432_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0181432_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0181432_22	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_23	phrog_5110	78.1	8.8e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0181432_23	UniRef90_A0A1C5LZF0	84.7	3.04e-19	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0181432_23	349161.Dred_2608	63.2	0.00000000000779	N/A	N/A
structural_annotation	UHGV-0181432_23	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_24	phrog_36	84.9	1.1e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0181432_24	UniRef90_A0A1C6IW44	120.0	1.95e-32	RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1	N/A
eggNOG-mapper	UHGV-0181432_24	1235800.C819_02243	93.2	2.52e-22	N/A	N/A
Pfam	UHGV-0181432_24	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0181432_24	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_25	phrog_15198	58.8	1.1e-16	N/A	unknown function
UniRef90	UHGV-0181432_25	UniRef90_A0A174HIL1	119.0	1.18e-33	N/A	N/A
PHROG	UHGV-0181432_26	phrog_8684	84.2	9.6e-25	N/A	unknown function
UniRef90	UHGV-0181432_26	UniRef90_UPI00156FED61	330.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0181432_26	476272.RUMHYD_03337	77.8	3.73e-16	N/A	N/A
Pfam	UHGV-0181432_26	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0181432_26	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_28	phrog_20593	51.3	0.000000000000015	N/A	unknown function
structural_annotation	UHGV-0181432_28	PF07870,TIGR02501	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_29	phrog_10714	43.9	0.0000000000037	N/A	unknown function
PHROG	UHGV-0181432_30	phrog_15198	47.0	0.000000000000011	N/A	unknown function
UniRef90	UHGV-0181432_30	UniRef90_UPI0015708581	307.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181432_30	658655.HMPREF0988_00863	68.6	0.00000000000251	N/A	N/A
Pfam	UHGV-0181432_30	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0181432_31	phrog_15198	46.6	0.00000000000063	N/A	unknown function
UniRef90	UHGV-0181432_31	UniRef90_UPI00156F8460	226.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181432_31	411461.DORFOR_01155	137.0	5.73005e-41	N/A	N/A
Pfam	UHGV-0181432_31	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0181432_35	PF17516,NF037951	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181432_36	UniRef90_UPI000E4AEE34	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181432_36	411460.RUMTOR_01556	201.0	0	N/A	N/A
Pfam	UHGV-0181432_36	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-0181432_36	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_37	phrog_7566	102.5	1.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-0181432_37	97139.C824_05985	112.0	1.11e-30	N/A	N/A
KOfam	UHGV-0181432_39	K03497	139.7	3.59994e-41	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0181432_39	phrog_6218	199.3	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181432_39	UniRef90_A0A174HNH0	814.0	0	Probable chromosome-partitioning protein parB	N/A
eggNOG-mapper	UHGV-0181432_39	411461.DORFOR_01144	316.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0181432_39	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0181432_39	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0181432_39	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0181432_39	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0181432_40	K03469	56.2	7.6e-16	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0181432_40	phrog_531	59.6	5.5e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181432_40	UniRef90_A0A174HML3	206.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0181432_40	1235792.C808_03083	76.6	2.11e-16	RNase H	N/A
Pfam	UHGV-0181432_40	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0181432_40	COG0328	N/A	N/A	Ribonuclease HI	N/A
PHROG	UHGV-0181432_41	phrog_3584	147.3	8.82818e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0181432_41	33035.JPJF01000138_gene3005	358.0	0	N/A	N/A
structural_annotation	UHGV-0181432_41	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_42	phrog_3777	78.4	6e-23	N/A	unknown function
UniRef90	UHGV-0181432_42	UniRef90_A0A3E4GMR6	227.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181432_42	411460.RUMTOR_02064	119.0	4.2e-33	N/A	N/A
Pfam	UHGV-0181432_42	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0181432_42	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_45	phrog_1305	141.2	5.70048e-42	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181432_45	UniRef90_UPI00156E7345	472.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181432_45	445974.CLORAM_02962	181.0	0	N/A	N/A
structural_annotation	UHGV-0181432_45	PF06573	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_46	phrog_14088	56.5	2.7e-16	N/A	unknown function
UniRef90	UHGV-0181432_46	UniRef90_M9LIB6	62.0	0.0000000000356	Membrane carboxypeptidase	N/A
eggNOG-mapper	UHGV-0181432_46	1256908.HMPREF0373_00648	51.6	0.0000000722	N/A	N/A
structural_annotation	UHGV-0181432_48	COG1321	N/A	N/A	N/A	N/A
KOfam	UHGV-0181432_49	K22300	52.0	0.000000000000016	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0181432_49	phrog_4	41.6	0.000000000025	transcriptional repressor	transcription regulation
UniRef90	UHGV-0181432_49	UniRef90_A0A3R6IKH4	257.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0181432_49	1280698.AUJS01000007_gene1002	148.0	4.2039e-44	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0181432_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0181432_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0181432_49	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0181432_50	phrog_38135	65.4	3.8e-19	N/A	unknown function
UniRef90	UHGV-0181432_50	UniRef90_UPI001F3985DB	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-0181432_50	661087.HMPREF1008_01261	81.3	0.0000000000000492	sequence-specific DNA binding	N/A
Pfam	UHGV-0181432_50	PF14020	N/A	N/A	N/A	DUF4236
COG	UHGV-0181432_50	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-0181432_50	PF14020	N/A	N/A	N/A	N/A