UHGV-0181451 (vOTU-086787)

Viral Genome: UHGV-0181451

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0181451
vOTU ID	vOTU-086787
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_593888
Associated BioSample	SAMN09781755
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	92.94 (High-quality)
Trimmed provirus	No
CheckV viral markers	6
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9819
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	10.86
Jumbo phage	No

Genome content
Genome length (bp)	39,154
GC content	58.54%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	48
CDS density	95%
Average CDS length (bps)	774.81
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 92.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0181451_2	NF033716	N/A	N/A	N/A	N/A
PHROG	UHGV-0181451_3	phrog_190	105.2	5.8e-31	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0181451_3	UniRef90_UPI0006C2AC63	114.0	1.12e-29	N/A	N/A
eggNOG-mapper	UHGV-0181451_3	693746.OBV_25250	117.0	1.74e-31	N/A	N/A
Pfam	UHGV-0181451_3	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0181451_3	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0181451_7	phrog_3584	117.2	1.2e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0181451_7	537013.CLOSTMETH_02141	80.9	5.73e-16	N/A	N/A
structural_annotation	UHGV-0181451_7	PF21578,MF_00360	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181451_8	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-0181451_9	K06909	133.6	2e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0181451_9	phrog_979	122.7	3.4e-38	terminase large subunit	head and packaging
UniRef90	UHGV-0181451_9	UniRef90_A0A810Q5R0	610.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0181451_9	1410650.JHWL01000003_gene2834	573.0	0	N/A	N/A
Pfam	UHGV-0181451_9	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0181451_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0181451_9	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0181451_10	phrog_511	208.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0181451_10	1410650.JHWL01000003_gene2827	326.0	0	N/A	N/A
structural_annotation	UHGV-0181451_10	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0181451_11	phrog_156	303.1	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0181451_11	1410650.JHWL01000003_gene2833	534.0	0	N/A	N/A
structural_annotation	UHGV-0181451_11	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0181451_12	phrog_13908	196.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0181451_12	1410650.JHWL01000003_gene2831	125.0	6.74e-31	N/A	N/A
PHROG	UHGV-0181451_13	phrog_1357	237.8	0	major head protein	head and packaging
UniRef90	UHGV-0181451_13	UniRef90_A0A2V2CFL5	397.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0181451_13	1410650.JHWL01000003_gene2830	292.0	0	N/A	N/A
Pfam	UHGV-0181451_13	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0181451_13	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0181451_13	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0181451_14	phrog_15239	44.3	0.0000000000022	N/A	unknown function
PHROG	UHGV-0181451_15	phrog_12105	115.5	2.9e-34	N/A	unknown function
eggNOG-mapper	UHGV-0181451_15	1226322.HMPREF1545_03850	57.4	0.0000000174	N/A	N/A
eggNOG-mapper	UHGV-0181451_16	537007.BLAHAN_05255	67.4	0.00000000396	N/A	N/A
UniRef90	UHGV-0181451_18	UniRef90_R5DCX9	191.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181451_18	1410650.JHWL01000003_gene2815	129.0	1.14e-30	N/A	N/A
eggNOG-mapper	UHGV-0181451_19	1232449.BAHV02000016_gene1805	534.0	0	N/A	N/A
Pfam	UHGV-0181451_19	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
structural_annotation	UHGV-0181451_20	PF18962,NF011773	N/A	N/A	N/A	N/A
KOfam	UHGV-0181451_21	K16617	50.2	0.00000000000002	COL13A; collagen type XIII alpha	N/A
Pfam	UHGV-0181451_21	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0181451_21	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
eggNOG-mapper	UHGV-0181451_22	1232443.BAIA02000078_gene14	57.4	0.00000153	nuclear chromosome segregation	N/A
COG	UHGV-0181451_22	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-0181451_24	K20846	63.8	1.5e-18	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-0181451_24	phrog_215	98.9	5.3e-29	structural protein with Ig domain	head and packaging
UniRef90	UHGV-0181451_24	UniRef90_A0A1I1Z9R5	113.0	6.91e-23	Calcineurin-like phosphoesterase	N/A
eggNOG-mapper	UHGV-0181451_24	485916.Dtox_1961	81.3	0.000000000000683	PFAM Bacterial Ig-like domain (group 2)	N/A
Pfam	UHGV-0181451_24	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0181451_24	COG3210	N/A	N/A	Large exoprotein involved in heme utilization or adhesion	N/A
structural_annotation	UHGV-0181451_24	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0181451_25	phrog_937	45.4	0.0000000000015	hemolysin	other
eggNOG-mapper	UHGV-0181451_25	1519439.JPJG01000023_gene533	73.6	0.00000000000000254	N/A	N/A
PHROG	UHGV-0181451_27	phrog_13256	63.7	1.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0181451_27	428125.CLOLEP_01907	75.1	3.84e-17	N/A	N/A
UniRef90	UHGV-0181451_28	UniRef90_A0A358M2Y7	228.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0181451_28	525254.HMPREF0072_1273	223.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0181451_28	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0181451_28	NF033743	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181451_29	UniRef90_A0A843IZ65	63.2	0.0000000000124	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-0181451_29	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
structural_annotation	UHGV-0181451_29	PF04545,MF_00245,TIGR02985,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181451_32	UniRef90_A0A8F0WD75	73.9	0.000000000000277	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0181451_32	1378168.N510_03079	72.0	0.000000000000677	N/A	N/A
KOfam	UHGV-0181451_33	K14059	132.8	5.2e-39	int; integrase	N/A
PHROG	UHGV-0181451_33	phrog_1	146.7	1.90577e-43	integrase	integration and excision
UniRef90	UHGV-0181451_33	UniRef90_A0A2Z4QB94	320.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0181451_33	641112.ACOK01000111_gene1860	107.0	1.06e-23	Phage integrase family	N/A
Pfam	UHGV-0181451_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0181451_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0181451_33	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0181451_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0181451_34	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0181451_36	1449126.JQKL01000104_gene2715	62.8	0.00000000562	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0181451_36	PF02805	N/A	N/A	Metal binding domain of Ada	Ada_Zn_binding
COG	UHGV-0181451_36	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
KOfam	UHGV-0181451_38	K18830	58.0	2.6e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0181451_38	phrog_8	52.9	0.0000000000000086	transcriptional regulator	transcription regulation
UniRef90	UHGV-0181451_38	UniRef90_E2ZIF0	127.0	5.21e-35	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0181451_38	748224.HMPREF9436_01444	127.0	8.75e-36	N/A	N/A
PADLOC	UHGV-0181451_38	retron_type_VI_hth_cluster2_1	47.7	0.0000000000004	N/A	Retron
Pfam	UHGV-0181451_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0181451_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0181451_38	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0181451_41	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0181451_44	UniRef90_A0A098GES5	101.0	6.59e-26	Putative phage associated protein	N/A
structural_annotation	UHGV-0181451_44	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
KOfam	UHGV-0181451_47	K00390	95.0	8.6e-28	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0181451_47	phrog_424	113.8	1.2e-33	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0181451_47	UniRef90_UPI001D087498	420.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0181451_47	1408437.JNJN01000032_gene2312	318.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0181451_47	BrxP_00001	60.3	5.4e-18	BrxP	BREX
Pfam	UHGV-0181451_47	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0181451_47	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0181451_47	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A