Overview | |
---|---|
UHGV ID | UHGV-0182925 |
vOTU ID | vOTU-060548 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SAMEA2580241_a1_ct70734_vs1@Siphoviridae__sp._ctkk01 |
Associated BioSample | SAMEA2580241 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 77.14 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 17 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9682 |
Virus hallmark genes (geNomad) | 8 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 32.43 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 30,089 |
GC content | 28.97% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 48 |
CDS density | 93% |
Average CDS length (bps) | 583.38 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |