UHGV-0183557 (vOTU-071847)

Viral Genome: UHGV-0183557

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0183557
vOTU ID	vOTU-071847
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMEA2737653_a1_ct61626_vs1@Siphoviridae__sp._ctZ351
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	90.68 (High-quality)
Trimmed provirus	Yes
CheckV viral markers	22
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9735
Virus hallmark genes (geNomad)	11
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	40.17
Jumbo phage	No

Genome content
Genome length (bp)	36,029
GC content	44.13%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	93%
Average CDS length (bps)	657.29
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0183557_1	K14059	175.0	0	int; integrase	N/A
PHROG	UHGV-0183557_1	phrog_1	178.6	0	integrase	integration and excision
UniRef90	UHGV-0183557_1	UniRef90_UPI001D0153FD	725.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0183557_1	1280698.AUJS01000007_gene999	345.0	0	Phage integrase family	N/A
Pfam	UHGV-0183557_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0183557_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0183557_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_2	phrog_1847	347.2	0	N/A	unknown function
UniRef90	UHGV-0183557_2	UniRef90_A0A1C5Z1C0	834.0	0	T5orf172 domain	N/A
eggNOG-mapper	UHGV-0183557_2	1256908.HMPREF0373_00641	481.0	0	T5orf172	N/A
Pfam	UHGV-0183557_2	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0183557_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0183557_2	PF13250,NF041454	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_3	phrog_87	100.2	1.3e-29	metallo-protease	other
UniRef90	UHGV-0183557_3	UniRef90_A0A1C5Z1C1	285.0	0	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-0183557_3	411460.RUMTOR_02055	189.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0183557_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0183557_3	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0183557_3	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0183557_4	K22300	54.0	0.0000000000000036	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0183557_4	phrog_8	69.1	9.2e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0183557_4	UniRef90_A0A355NMI4	211.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0183557_4	411460.RUMTOR_02056	198.0	0	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0183557_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0183557_4	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0183557_4	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_5	phrog_8	56.4	7.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0183557_5	UniRef90_UPI00130E3D9D	125.0	1.86e-36	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0183557_5	411459.RUMOBE_00960	101.0	7.28e-28	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0183557_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0183557_5	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_7	phrog_2232	179.3	0	N/A	unknown function
UniRef90	UHGV-0183557_7	UniRef90_UPI00156E3693	523.0	0	N/A	N/A
eggNOG-mapper	UHGV-0183557_7	633697.EubceDRAFT1_1462	163.0	0	N/A	N/A
Pfam	UHGV-0183557_7	PF14337	N/A	N/A	Abortive infection alpha	Abi_alpha
structural_annotation	UHGV-0183557_7	PF14337,TIGR03899	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183557_8	PF20063	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_10	phrog_3777	83.7	1.3e-24	N/A	unknown function
UniRef90	UHGV-0183557_10	UniRef90_UPI0018AB338A	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-0183557_10	411460.RUMTOR_02064	121.0	4.22e-34	N/A	N/A
Pfam	UHGV-0183557_10	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0183557_10	PF12957	N/A	N/A	N/A	N/A
KOfam	UHGV-0183557_11	K03546	59.2	4.7e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0183557_11	phrog_1499	513.9	0	N/A	unknown function
UniRef90	UHGV-0183557_11	UniRef90_UPI00189C25B6	764.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0183557_11	411462.DORLON_00812	585.0	0	AAA ATPase domain	N/A
Pfam	UHGV-0183557_11	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0183557_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0183557_11	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_12	phrog_124	254.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183557_12	UniRef90_UPI001897B051	741.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0183557_12	411462.DORLON_00811	453.0	0	AAA domain	N/A
Pfam	UHGV-0183557_12	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0183557_12	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_13	phrog_2698	159.6	0	N/A	unknown function
UniRef90	UHGV-0183557_13	UniRef90_UPI00189B1EC1	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-0183557_13	478749.BRYFOR_07585	169.0	0	N/A	N/A
structural_annotation	UHGV-0183557_13	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-0183557_14	K17677	343.6	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0183557_14	phrog_16	278.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183557_14	UniRef90_A0A174B1D7	983.0	0	Type-1 restriction enzyme R protein	N/A
eggNOG-mapper	UHGV-0183557_14	411462.DORLON_00809	910.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-0183557_14	mREase_IV_00005	132.4	4.1e-39	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0183557_14	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0183557_14	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0183557_14	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0183557_14	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-0183557_15	K07505	420.5	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0183557_15	phrog_2597	1220.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183557_15	UniRef90_UPI0018AABA9E	1546.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0183557_15	411462.DORLON_00808	1092.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0183557_15	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0183557_15	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0183557_15	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0183557_15	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0183557_16	K01160	51.3	0.000000000000034	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0183557_16	phrog_140	93.9	1.8e-27	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183557_16	UniRef90_UPI001D011E89	278.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0183557_16	1235792.C808_05386	221.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0183557_16	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0183557_16	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0183557_16	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0183557_21	1298920.KI911353_gene4863	73.2	0.000000000000107	N/A	N/A
PHROG	UHGV-0183557_25	phrog_36	67.6	2.2e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0183557_25	UniRef90_R6ZAS5	138.0	5.03e-39	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-0183557_25	476272.RUMHYD_02841	180.0	0	N/A	N/A
structural_annotation	UHGV-0183557_25	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_26	phrog_3634	118.1	6.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-0183557_26	498211.CJA_0810	171.0	0	phosphatase homologous to the C-terminal domain of histone macroH2A1	N/A
COG	UHGV-0183557_26	COG2110	N/A	N/A	O-acetyl-ADP-ribose deacetylase (regulator of RNase III), contains Macro domain	N/A
KOfam	UHGV-0183557_27	K07474	139.8	2.89999e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0183557_27	phrog_51	135.1	4.1e-40	terminase small subunit	head and packaging
UniRef90	UHGV-0183557_27	UniRef90_A0A417CPY2	314.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0183557_27	742740.HMPREF9474_03499	216.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0183557_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0183557_27	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0183557_27	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0183557_28	K06909	87.6	1.8e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0183557_28	phrog_2	72.5	9.4e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0183557_28	UniRef90_UPI0011DDB413	965.0	0	terminase	N/A
eggNOG-mapper	UHGV-0183557_28	1304866.K413DRAFT_0811	648.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0183557_28	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0183557_28	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_29	phrog_533	265.3	0	portal protein	head and packaging
UniRef90	UHGV-0183557_29	UniRef90_UPI0011DCF338	1059.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0183557_29	1122918.KB907248_gene4503	510.0	0	N/A	N/A
Pfam	UHGV-0183557_29	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0183557_29	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_31	phrog_581	250.7	0	minor head protein	head and packaging
UniRef90	UHGV-0183557_31	UniRef90_A0A1C5PIA8	772.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0183557_31	33035.JPJF01000093_gene2255	501.0	0	N/A	N/A
Pfam	UHGV-0183557_31	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0183557_31	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0183557_31	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183557_32	PF11344	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_35	phrog_194	164.9	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0183557_35	UniRef90_UPI001D02A5C9	362.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0183557_35	1262449.CP6013_3198	158.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0183557_35	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0183557_35	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_36	phrog_212	281.9	0	major head protein	head and packaging
UniRef90	UHGV-0183557_36	UniRef90_A0A416Q289	574.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0183557_36	1151292.QEW_2433	496.0	0	N/A	N/A
Pfam	UHGV-0183557_36	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0183557_36	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_37	phrog_15682	72.6	4.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0183557_37	469618.FVAG_01311	74.3	2.6e-16	N/A	N/A
PHROG	UHGV-0183557_38	phrog_541	83.7	1.9e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0183557_38	742740.HMPREF9474_03507	204.0	0	N/A	N/A
PHROG	UHGV-0183557_39	phrog_8710	144.6	2.39622e-43	N/A	unknown function
eggNOG-mapper	UHGV-0183557_39	1304866.K413DRAFT_0782	152.0	0	N/A	N/A
structural_annotation	UHGV-0183557_39	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_40	phrog_556	60.1	3.5e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0183557_40	742740.HMPREF9474_03509	180.0	0	N/A	N/A
PHROG	UHGV-0183557_41	phrog_2595	79.9	2.9e-23	head-tail connector protein	connector
UniRef90	UHGV-0183557_41	UniRef90_UPI001C00BA9C	182.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0183557_41	1123263.AUKY01000051_gene1075	95.9	1.42e-23	N/A	N/A
Pfam	UHGV-0183557_41	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0183557_41	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_42	phrog_820	130.1	1e-38	major tail protein	tail
eggNOG-mapper	UHGV-0183557_42	1282664.H354_06691	218.0	0	N/A	N/A
structural_annotation	UHGV-0183557_42	PF06199,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_43	phrog_8300	93.8	1.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0183557_43	33035.JPJF01000093_gene2245	99.4	6.02e-26	N/A	N/A
structural_annotation	UHGV-0183557_43	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_44	phrog_8355	108.6	1.9e-32	N/A	unknown function
UniRef90	UHGV-0183557_44	UniRef90_UPI001C031F13	117.0	1.36e-32	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0183557_44	33035.JPJF01000093_gene2244	108.0	2.96e-30	N/A	N/A
PHROG	UHGV-0183557_46	phrog_1535	396.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0183557_46	UniRef90_A0A1C5RGR7	920.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0183557_46	33035.JPJF01000093_gene2243	806.0	0	phage tail tape measure protein	N/A
COG	UHGV-0183557_46	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0183557_46	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_47	phrog_1194	76.5	3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0183557_47	33035.JPJF01000093_gene2242	152.0	0	N/A	N/A
structural_annotation	UHGV-0183557_47	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_48	phrog_2566	73.6	2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0183557_48	203120.LEUM_1633	52.8	0.0000000443	N/A	N/A
PHROG	UHGV-0183557_49	phrog_1401	66.6	3.7e-19	N/A	unknown function
UniRef90	UHGV-0183557_49	UniRef90_A0A7C6P910	91.3	3.38e-21	N/A	N/A
eggNOG-mapper	UHGV-0183557_49	1232453.BAIF02000058_gene1640	108.0	9.09e-29	N/A	N/A
structural_annotation	UHGV-0183557_49	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0183557_50	phrog_16267	127.2	0	N/A	unknown function
UniRef90	UHGV-0183557_50	UniRef90_UPI00073E79CE	791.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0183557_50	411459.RUMOBE_00923	760.0	0	N/A	N/A
COG	UHGV-0183557_50	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0183557_50	PF05113,PF02010,NF033848,NF011764,COG3500	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0183557_51	411459.RUMOBE_04220	89.4	6.05e-20	Histidine kinase	N/A
COG	UHGV-0183557_51	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A