UHGV-0183659 (vOTU-091661)

Viral Genome: UHGV-0183659

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0183659
vOTU ID	vOTU-091661
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_595564
Associated BioSample	SAMN09781757
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	71.18 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9829
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.02
Jumbo phage	No

Genome content
Genome length (bp)	29,939
GC content	55.19%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	92%
Average CDS length (bps)	628.91
Total tRNA genes	4
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 71.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0183659_1	phrog_20016	205.8	0	N/A	unknown function
UniRef90	UHGV-0183659_1	UniRef90_A0A285PT46	196.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0183659_1	1226322.HMPREF1545_00077	183.0	0	N/A	N/A
structural_annotation	UHGV-0183659_1	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_3	phrog_16490	154.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0183659_3	1408437.JNJN01000043_gene803	137.0	5.52e-37	N/A	N/A
PHROG	UHGV-0183659_4	phrog_22984	80.5	1.1e-23	N/A	unknown function
PHROG	UHGV-0183659_5	phrog_21718	117.0	1.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0183659_5	397290.C810_05210	97.1	2.14e-23	N/A	N/A
PHROG	UHGV-0183659_6	phrog_3754	96.2	2.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0183659_6	1485543.JMME01000025_gene2462	105.0	6.9e-28	N/A	N/A
KOfam	UHGV-0183659_10	K24213	86.2	1.8e-25	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0183659_10	phrog_6320	86.8	3.3e-25	tail fiber protein	tail
eggNOG-mapper	UHGV-0183659_10	411483.FAEPRAA2165_00757	170.0	2.10195e-44	N/A	N/A
Pfam	UHGV-0183659_10	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0183659_10	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_11	phrog_15303	118.5	2.6e-35	N/A	unknown function
Pfam	UHGV-0183659_11	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
KOfam	UHGV-0183659_13	K07273	186.0	0	acm; lysozyme	N/A
PHROG	UHGV-0183659_13	phrog_291	152.4	2.8026e-45	endolysin	lysis
UniRef90	UHGV-0183659_13	UniRef90_E2ZES5	314.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0183659_13	748224.HMPREF9436_00154	314.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0183659_13	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0183659_13	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0183659_13	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_15	phrog_10993	285.8	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0183659_15	UniRef90_UPI00082CBED4	244.0	0	N/A	N/A
eggNOG-mapper	UHGV-0183659_15	1121334.KB911071_gene1970	198.0	0	N/A	N/A
Pfam	UHGV-0183659_15	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0183659_15	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0183659_16	657322.FPR_13550	50.8	0.00000525	Bacterial Ig-like domain (group 2)	N/A
COG	UHGV-0183659_16	COG5492	N/A	N/A	N/A	N/A
COG	UHGV-0183659_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
PHROG	UHGV-0183659_19	phrog_3558	277.5	0	tail protein	tail
UniRef90	UHGV-0183659_19	UniRef90_A0A844DGT5	1175.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0183659_19	1391188.A0A068EMP3_9CAUD	135.0	2.06e-29	N/A	N/A
Pfam	UHGV-0183659_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
structural_annotation	UHGV-0183659_19	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_20	phrog_28775	149.4	2.8026e-45	tail length tape measure protein	tail
UniRef90	UHGV-0183659_20	UniRef90_A0A844DDD5	917.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0183659_20	1492737.FEM08_12070	137.0	1.09e-30	tape measure	N/A
Pfam	UHGV-0183659_20	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0183659_20	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0183659_20	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0183659_20	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_23	phrog_885	62.1	7.3e-18	major tail protein	tail
UniRef90	UHGV-0183659_23	UniRef90_A0A843J9F0	122.0	5.85e-31	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0183659_23	457396.CSBG_01054	57.0	0.000000337	Chitobiase/beta-hexosaminidase C-terminal domain	N/A
COG	UHGV-0183659_23	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0183659_23	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183659_24	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_25	phrog_17977	49.1	0.000000000000085	N/A	unknown function
UniRef90	UHGV-0183659_25	UniRef90_A0A844DHJ8	233.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-0183659_25	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_27	phrog_544	142.3	3.50044e-42	major head protein	head and packaging
UniRef90	UHGV-0183659_27	UniRef90_R0BKA1	435.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0183659_27	476272.RUMHYD_01776	324.0	0	N/A	N/A
structural_annotation	UHGV-0183659_27	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183659_28	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_30	phrog_5	52.1	0.000000000000016	tail completion or Neck1 protein	connector
UniRef90	UHGV-0183659_30	UniRef90_A0A844DDB3	293.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0183659_30	1123309.AQYB01000018_gene814	91.3	1.59e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0183659_30	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0183659_30	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_31	phrog_2468	80.3	1.2e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0183659_31	UniRef90_A0A844DBI4	601.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0183659_31	1504822.CCNO01000013_gene286	124.0	2.01e-28	cell adhesion	N/A
Pfam	UHGV-0183659_31	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0183659_31	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183659_31	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_32	phrog_21498	59.6	5.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0183659_32	469378.Ccur_02830	63.2	0.000000000175	DNA binding	N/A
COG	UHGV-0183659_32	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0183659_33	phrog_21498	165.7	0	N/A	unknown function
UniRef90	UHGV-0183659_33	UniRef90_A0A261EYN2	79.0	3.65e-17	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0183659_33	78346.BRUM_0376	167.0	0	DNA binding	N/A
COG	UHGV-0183659_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
PHROG	UHGV-0183659_34	phrog_64	123.8	5.2e-37	portal protein	head and packaging
UniRef90	UHGV-0183659_34	UniRef90_A0A6N7TNT3	493.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0183659_34	673376.F2VHW1_9CAUD	169.0	1.26117e-44	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0183659_34	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0183659_34	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0183659_35	K06909	369.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0183659_35	phrog_3717	159.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0183659_35	UniRef90_A0A416S378	484.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0183659_35	665956.HMPREF1032_02957	448.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0183659_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0183659_35	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0183659_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0183659_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0183659_35	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_37	phrog_36	52.1	0.000000000000011	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0183659_37	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0183659_39	K01160	45.6	0.0000000000019	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0183659_39	phrog_34	41.8	0.00000000002	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183659_39	UniRef90_A0A844DBG8	130.0	1.37e-37	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0183659_39	875454.BAEW01000002_gene491	94.0	5.57e-24	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0183659_39	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0183659_39	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
PHROG	UHGV-0183659_41	phrog_757	170.7	0	DNA methyltransferase	other
UniRef90	UHGV-0183659_41	UniRef90_UPI001C00B13F	444.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0183659_41	748224.HMPREF9436_03069	323.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0183659_41	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0183659_41	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_43	phrog_5968	75.4	6.4e-22	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183659_43	UniRef90_UPI001C02E649	369.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0183659_43	718252.FP2_01000	173.0	0	N/A	N/A
NCBIFam	UHGV-0183659_43	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0183659_43	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0183659_43	PF09681,MF_01819,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
PHROG	UHGV-0183659_44	phrog_14105	192.7	0	N/A	unknown function
UniRef90	UHGV-0183659_44	UniRef90_UPI001D11F597	123.0	1.96e-33	pentapeptide repeat-containing protein	N/A
eggNOG-mapper	UHGV-0183659_44	742740.HMPREF9474_02378	111.0	6.5e-29	dextransucrase activity	N/A
COG	UHGV-0183659_44	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-0183659_44	PF01469	N/A	N/A	N/A	N/A