UHGV-0184067 (vOTU-029423)

Viral Genome: UHGV-0184067

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0184067
vOTU ID	vOTU-029423
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_595614
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	56.58 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	20
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9811
Virus hallmark genes (geNomad)	4
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.04
Jumbo phage	No

Genome content
Genome length (bp)	34,646
GC content	33.05%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	39
CDS density	94%
Average CDS length (bps)	835.85
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0184067_4	K04068	179.3	0	nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]	N/A
PHROG	UHGV-0184067_4	phrog_626	161.9	0	anaerobic ribonucleotide reductase small subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184067_4	UniRef90_A0A645D7A4	227.0	0	Anaerobic ribonucleoside-triphosphate reductase-activating protein	N/A
eggNOG-mapper	UHGV-0184067_4	1414720.CBYM010000058_gene26	195.0	0	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine	N/A
Pfam	UHGV-0184067_4	PF13353	N/A	N/A	4Fe-4S single cluster domain	Fer4_12
NCBIFam	UHGV-0184067_4	TIGR02491.1	N/A	N/A	anaerobic ribonucleoside-triphosphate reductase activating protein	N/A
COG	UHGV-0184067_4	COG0602	N/A	N/A	Organic radical activating enzyme NrdG/QueE	N/A
structural_annotation	UHGV-0184067_4	PF13353,MF_00917,TIGR02491,COG0602	N/A	N/A	N/A	N/A
KOfam	UHGV-0184067_5	K21636	394.0	0	nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]	N/A
PHROG	UHGV-0184067_5	phrog_487	590.9	0	NrdD-like anaerobic ribonucleotide reductase large subunit	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0184067_5	UniRef90_R6YAY9	654.0	0	Anaerobic ribonucleoside-triphosphate reductase	N/A
eggNOG-mapper	UHGV-0184067_5	1232446.BAIE02000055_gene3075	647.0	0	Ribonucleoside-triphosphate reductase	N/A
Pfam	UHGV-0184067_5	PF03477	N/A	N/A	ATP cone domain	ATP-cone
Pfam	UHGV-0184067_5	PF13597	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	NRDD
NCBIFam	UHGV-0184067_5	NF006732.0	N/A	N/A	anaerobic ribonucleoside-triphosphate reductase	N/A
COG	UHGV-0184067_5	COG1328	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	N/A
structural_annotation	UHGV-0184067_5	PF13597,PF03477,MF_00440,NF006732,COG1328	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_6	phrog_6466	73.2	3e-21	DNA ligase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0184067_6	1147137.I1TJZ8_9CAUD	71.2	0.0000000000000151	ligase activity	N/A
KOfam	UHGV-0184067_7	K01491	190.5	0	folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]	N/A
PHROG	UHGV-0184067_7	phrog_7320	156.3	0	tetrahydrofolate dehydrogenase and cyclohydrolase	other
UniRef90	UHGV-0184067_7	UniRef90_A0A352MV64	144.0	5.96e-38	Bifunctional protein FolD	N/A
eggNOG-mapper	UHGV-0184067_7	1002809.SSIL_1698	140.0	4.9e-37	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate	N/A
Pfam	UHGV-0184067_7	PF00763	N/A	N/A	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain	THF_DHG_CYH
Pfam	UHGV-0184067_7	PF02882	N/A	N/A	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain	THF_DHG_CYH_C
COG	UHGV-0184067_7	COG0190	N/A	N/A	5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase	N/A
structural_annotation	UHGV-0184067_7	PF02882,PF00763,MF_01576,NF010775,COG0190	N/A	N/A	N/A	N/A
KOfam	UHGV-0184067_8	K01520	87.3	2e-25	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0184067_8	phrog_135	106.9	1.7e-31	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184067_8	UniRef90_UPI00189D1071	199.0	0	dUTP pyrophosphatase	N/A
eggNOG-mapper	UHGV-0184067_8	642492.Clole_2019	177.0	0	dUTPase	N/A
Pfam	UHGV-0184067_8	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-0184067_8	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0184067_8	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_9	phrog_62	160.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184067_9	UniRef90_A0A7X4ZP73	552.0	0	Helicase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0184067_9	665956.HMPREF1032_00650	537.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0184067_9	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0184067_9	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_10	phrog_24386	181.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0184067_10	742740.HMPREF9474_02291	164.0	4.2039e-45	phosphatase activity	N/A
COG	UHGV-0184067_10	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
PHROG	UHGV-0184067_12	phrog_4787	182.4	0	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0184067_12	411460.RUMTOR_01384	182.0	0	N/A	N/A
structural_annotation	UHGV-0184067_12	PF21265,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_14	phrog_4210	1913.8	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184067_14	UniRef90_UPI00164B6B51	1676.0	0	N/A	N/A
eggNOG-mapper	UHGV-0184067_14	742740.HMPREF9474_02303	1667.0	0	N/A	N/A
Pfam	UHGV-0184067_14	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0184067_14	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
structural_annotation	UHGV-0184067_14	PF00136,PF05272,PF10991,PF09250,MF_04100,MF_00016,NF011296,TIGR00592,COG3378,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_16	phrog_4678	165.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0184067_16	742740.HMPREF9474_02306	158.0	0	N/A	N/A
PHROG	UHGV-0184067_17	phrog_4695	74.3	2.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0184067_17	742733.HMPREF9469_05070	78.2	0.00000000000000396	N/A	N/A
PHROG	UHGV-0184067_18	phrog_2152	180.6	0	N/A	unknown function
UniRef90	UHGV-0184067_18	UniRef90_D4P7I0	132.0	3.31e-33	Gp069	N/A
eggNOG-mapper	UHGV-0184067_18	691965.D4P7I0_9CAUD	132.0	5.55e-34	N/A	N/A
Pfam	UHGV-0184067_18	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0184067_18	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_19	phrog_236	99.5	5.5e-29	nucleotide kinase	other
UniRef90	UHGV-0184067_19	UniRef90_A0A4D6DT77	87.0	6.33e-19	N/A	N/A
eggNOG-mapper	UHGV-0184067_19	742740.HMPREF9474_02311	115.0	6.47e-32	N/A	N/A
Pfam	UHGV-0184067_19	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0184067_19	PF18300,MF_01549,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_20	phrog_4079	173.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0184067_20	742733.HMPREF9469_05076	134.0	1.18e-36	N/A	N/A
PHROG	UHGV-0184067_22	phrog_2152	193.1	0	N/A	unknown function
UniRef90	UHGV-0184067_22	UniRef90_UPI001D065195	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0184067_22	665956.HMPREF1032_00634	183.0	0	N/A	N/A
Pfam	UHGV-0184067_22	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0184067_22	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_24	phrog_19711	41.8	0.000000000012	N/A	unknown function
PHROG	UHGV-0184067_27	phrog_15866	72.9	4.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0184067_27	742740.HMPREF9474_02324	68.2	0.000000000000747	N/A	N/A
eggNOG-mapper	UHGV-0184067_28	349123.Lreu23DRAFT_3172	62.8	0.000000427	N/A	N/A
UniRef90	UHGV-0184067_29	UniRef90_A0A1C6JBW5	117.0	1.04e-32	Small integral membrane protein	N/A
Pfam	UHGV-0184067_29	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
KOfam	UHGV-0184067_30	K01448	139.1	3.80004e-41	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0184067_30	phrog_435	143.0	2.49992e-42	endolysin	lysis
UniRef90	UHGV-0184067_30	UniRef90_A0A1T4X7E7	140.0	7.52e-38	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0184067_30	767817.Desgi_4433	139.0	3.64e-38	N-acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase, LytC amidase family	N/A
Pfam	UHGV-0184067_30	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0184067_30	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0184067_30	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0184067_30	PF01520,PF18342,MF_00562,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_33	phrog_21231	61.7	9.1e-18	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0184067_33	1499683.CCFF01000005_gene81	138.0	3.46e-31	N/A	N/A
Pfam	UHGV-0184067_33	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0184067_33	PF13229	N/A	N/A	Right handed beta helix region	Beta_helix
COG	UHGV-0184067_33	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0184067_34	phrog_1067	312.5	0	minor head protein	head and packaging
UniRef90	UHGV-0184067_34	UniRef90_UPI0018AACC41	468.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0184067_34	1123263.AUKY01000068_gene489	291.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0184067_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0184067_34	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0184067_34	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0184067_34	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_35	phrog_33	74.5	2.4e-21	distal tail protein Dit	tail
UniRef90	UHGV-0184067_35	UniRef90_A0A173Z1X4	276.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0184067_35	1582149.A0A0A8WHP7_9CAUD	102.0	1.12e-23	Phage tail protein	N/A
structural_annotation	UHGV-0184067_35	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_36	phrog_4372	933.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0184067_36	UniRef90_A0A173Z2Q0	509.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0184067_36	742733.HMPREF9469_05020	522.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0184067_36	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0184067_36	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0184067_36	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0184067_36	PF20155,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0184067_37	UniRef90_A0A373NV95	149.0	2.66247e-44	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0184067_37	742740.HMPREF9474_02263	139.0	8.19998e-41	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0184067_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0184067_37	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0184067_38	phrog_4338	225.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0184067_38	1537917.JU82_06570	199.0	0	N/A	N/A
PHROG	UHGV-0184067_39	phrog_4282	136.4	1.50001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0184067_39	478749.BRYFOR_08517	99.0	1.58e-24	N/A	N/A