UHGV-0186353 (vOTU-160097)

Viral Genome: UHGV-0186353

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0186353
vOTU ID	vOTU-160097
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_593329
Associated BioSample	SAMN09781784
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	59.3 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9818
Virus hallmark genes (geNomad)	3
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Uncertain - viral or bacterial
viralVerify score	6.34
Jumbo phage	No

Genome content
Genome length (bp)	25,134
GC content	52.26%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	43
CDS density	90%
Average CDS length (bps)	524.23
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 59.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0186353_1	1033743.CAES01000078_gene3736	58.5	0.0000000159	Flagellar Assembly Protein A	N/A
COG	UHGV-0186353_1	COG1315	N/A	N/A	Flagellar assembly protein FapA, interacts with EIIAGlc	N/A
eggNOG-mapper	UHGV-0186353_2	760568.Desku_0919	111.0	5.45e-28	N/A	N/A
structural_annotation	UHGV-0186353_2	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186353_3	693746.OBV_43260	49.7	0.000000434	N/A	N/A
structural_annotation	UHGV-0186353_3	PF09035,TIGR01764	N/A	N/A	N/A	N/A
UniRef90	UHGV-0186353_4	UniRef90_A0A1C7FQD9	87.0	4.49e-21	Transcriptional regulator	N/A
Pfam	UHGV-0186353_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0186353_4	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_5	phrog_8	51.5	0.000000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-0186353_5	UniRef90_A0A0V8DN09	61.2	0.000000000992	Phage transcriptional regulator Cro/CI family	N/A
eggNOG-mapper	UHGV-0186353_5	1229517.AMFD01000025_gene921	52.4	0.000000423	Lactococcus bacteriophage repressor	N/A
COG	UHGV-0186353_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0186353_5	PF01381,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_9	phrog_26308	57.8	1.7e-16	N/A	unknown function
UniRef90	UHGV-0186353_9	UniRef90_A0A3S1E765	76.6	0.000000000000114	Zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0186353_9	1345695.CLSA_c29670	70.9	0.00000000000721	N/A	N/A
Pfam	UHGV-0186353_9	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
Pfam	UHGV-0186353_9	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
structural_annotation	UHGV-0186353_9	PF03843,MF_01959,TIGR00752,NF041910,COG3390	N/A	N/A	N/A	N/A
Pfam	UHGV-0186353_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0186353_11	PF12844	N/A	N/A	N/A	N/A
KOfam	UHGV-0186353_12	K14059	131.0	1.5e-38	int; integrase	N/A
PHROG	UHGV-0186353_12	phrog_1	141.9	5.4006e-42	integrase	integration and excision
UniRef90	UHGV-0186353_12	UniRef90_UPI00195CC1EE	384.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0186353_12	1235835.C814_03141	196.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0186353_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0186353_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0186353_12	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186353_13	1226322.HMPREF1545_00079	106.0	3.12e-28	N/A	N/A
structural_annotation	UHGV-0186353_14	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_15	phrog_20016	194.7	0	N/A	unknown function
UniRef90	UHGV-0186353_15	UniRef90_A0A285PT46	189.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0186353_15	1226322.HMPREF1545_00077	171.0	0	N/A	N/A
structural_annotation	UHGV-0186353_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_16	phrog_16490	132.6	5.8e-40	N/A	unknown function
eggNOG-mapper	UHGV-0186353_16	1408437.JNJN01000043_gene803	148.0	2.89004e-41	N/A	N/A
PHROG	UHGV-0186353_17	phrog_22984	72.2	3.3e-23	N/A	unknown function
PHROG	UHGV-0186353_18	phrog_21718	104.5	8.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0186353_18	476272.RUMHYD_01768	57.8	0.0000000188	N/A	N/A
PHROG	UHGV-0186353_19	phrog_3754	104.4	9.8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0186353_19	476272.RUMHYD_01764	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-0186353_20	1384065.JAGS01000001_gene2489	51.2	0.00000104	N/A	N/A
structural_annotation	UHGV-0186353_22	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0186353_23	UniRef90_H1CEM5	216.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0186353_23	525254.HMPREF0072_1273	204.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0186353_23	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0186353_23	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_24	phrog_13256	63.2	2.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0186353_24	1226322.HMPREF1545_00132	73.9	1.81e-16	N/A	N/A
eggNOG-mapper	UHGV-0186353_27	1231336.L248_1708	53.5	0.00000109	N/A	N/A
structural_annotation	UHGV-0186353_27	PF14600	N/A	N/A	N/A	N/A
UniRef90	UHGV-0186353_29	UniRef90_A0A411ZUM8	221.0	0	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-0186353_29	471875.RUMLAC_02240	134.0	7.08e-32	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-0186353_29	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0186353_29	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0186353_29	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_30	phrog_13589	154.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0186353_30	428125.CLOLEP_01434	200.0	0	N/A	N/A
PHROG	UHGV-0186353_31	phrog_31538	50.7	0.00000000000004	N/A	unknown function
eggNOG-mapper	UHGV-0186353_31	428125.CLOLEP_01433	63.9	0.00000000000276	N/A	N/A
structural_annotation	UHGV-0186353_32	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
Pfam	UHGV-0186353_33	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-0186353_33	PF09826,MF_03001,TIGR04528,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_34	phrog_18725	47.7	0.00000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0186353_34	1226322.HMPREF1545_00062	79.0	0.0000000000000028	N/A	N/A
PHROG	UHGV-0186353_35	phrog_13879	238.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0186353_35	1226322.HMPREF1545_00061	360.0	0	N/A	N/A
structural_annotation	UHGV-0186353_35	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_36	phrog_1194	78.8	5.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-0186353_36	411902.CLOBOL_00125	117.0	5.52e-32	N/A	N/A
structural_annotation	UHGV-0186353_36	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_37	phrog_1535	120.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0186353_37	UniRef90_A0A810PX76	242.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0186353_37	1235797.C816_04182	400.0	0	SLT domain	N/A
COG	UHGV-0186353_37	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_38	phrog_706	127.5	9.2e-38	N/A	unknown function
UniRef90	UHGV-0186353_38	UniRef90_UPI000682A80B	226.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0186353_38	693746.OBV_18170	209.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0186353_38	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0186353_38	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_39	phrog_11299	64.6	1.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0186353_39	693746.OBV_18160	159.0	0	N/A	N/A
structural_annotation	UHGV-0186353_39	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_40	phrog_3099	71.0	1.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0186353_40	693746.OBV_18150	206.0	0	N/A	N/A
structural_annotation	UHGV-0186353_40	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_41	phrog_3266	45.3	0.0000000000011	tail completion	connector
UniRef90	UHGV-0186353_41	UniRef90_A0A2Z4QA01	101.0	4.17e-25	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0186353_41	1232443.BAIA02000078_gene24	171.0	0	N/A	N/A
structural_annotation	UHGV-0186353_41	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0186353_42	phrog_556	69.3	5e-20	minor head protein	head and packaging
UniRef90	UHGV-0186353_42	UniRef90_UPI00195E1497	212.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0186353_42	1226322.HMPREF1545_00054	162.0	0	Minor capsid protein	N/A
Pfam	UHGV-0186353_42	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0186353_42	PF11114	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186353_43	642492.Clole_0823	48.5	0.000000703	N/A	N/A