Overview | |
---|---|
UHGV ID | UHGV-0188162 |
vOTU ID | vOTU-057314 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SAMEA2580048_a1_ct18572_vs1@Siphoviridae__sp._ctNqI1 |
Associated BioSample | SAMEA2580048 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 99.9 (High-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 16 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9756 |
Virus hallmark genes (geNomad) | 10 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 32.84 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 37,744 |
GC content | 37.95% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 43 |
CDS density | 88% |
Average CDS length (bps) | 775.61 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |