Overview | |
---|---|
UHGV ID | UHGV-0189357 |
vOTU ID | vOTU-108353 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SAMEA2579917_a1_ct20316_vs1@Unclassified_virus__sp._ctlMq1 |
Associated BioSample | SAMEA2579917 |
Viral genome confidence | Uncertain |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 33.69 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 2 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
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geNomad score | 0.9751 |
Virus hallmark genes (geNomad) | 2 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - viral or bacterial |
viralVerify score | 4.91 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 14,687 |
GC content | 40.71% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 20 |
CDS density | 94% |
Average CDS length (bps) | 688.05 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |