Overview | |
---|---|
UHGV ID | UHGV-0189672 |
vOTU ID | vOTU-029846 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SAMEA2579972_a1_ct7250_vs1@Siphoviridae__sp._ctF451 |
Associated BioSample | SAMEA2579972 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 42.04 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 7 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9486 |
Virus hallmark genes (geNomad) | 3 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 15.78 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 15,700 |
GC content | 40.22% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 16 |
CDS density | 76% |
Average CDS length (bps) | 745.50 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |