UHGV-0191520 (vOTU-022966)

Viral Genome: UHGV-0191520

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0191520
vOTU ID	vOTU-022966
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMEA2737760_a1_ct24390_vs1@Myoviridae__sp._ct3OA1
Associated BioSample	SAMEA2737760
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	78.94 (Medium-quality)
Trimmed provirus	Yes
CheckV viral markers	17
CheckV host markers	2
Recoded stop codon	No

Viral Content
geNomad score	0.9792
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	41.14
Jumbo phage	No

Genome content
Genome length (bp)	30,262
GC content	42.72%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	94%
Average CDS length (bps)	619.63
Total tRNA genes	1
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 78.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0191520_1	phrog_7566	100.3	9.6e-30	N/A	unknown function
UniRef90	UHGV-0191520_1	UniRef90_A0A8D9UHC0	100.0	1.02e-25	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0191520_1	411902.CLOBOL_05695	70.5	0.0000000000000139	N/A	N/A
PHROG	UHGV-0191520_2	phrog_8470	216.0	0	N/A	unknown function
UniRef90	UHGV-0191520_2	UniRef90_UPI001C10724F	120.0	3.2e-25	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0191520_2	411459.RUMOBE_00950	119.0	1.56e-25	PcfJ-like protein	N/A
Pfam	UHGV-0191520_2	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0191520_2	PF14284	N/A	N/A	N/A	N/A
UniRef90	UHGV-0191520_3	UniRef90_UPI0008BD6C31	86.3	1.67e-18	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0191520_3	1235792.C808_00065	86.7	2.72e-19	N/A	N/A
COG	UHGV-0191520_4	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0191520_4	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_5	phrog_3584	209.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0191520_5	1196322.A370_05744	195.0	0	N/A	N/A
structural_annotation	UHGV-0191520_5	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_8	phrog_11237	49.0	8.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0191520_8	478749.BRYFOR_08581	64.7	0.0000000000225	N/A	N/A
structural_annotation	UHGV-0191520_9	PF20037	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_10	phrog_874	161.2	0	N/A	unknown function
UniRef90	UHGV-0191520_10	UniRef90_UPI0018F57B3A	192.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0191520_10	411468.CLOSCI_00298	179.0	0	N/A	N/A
structural_annotation	UHGV-0191520_10	PF04266,MF_00684,NF003443,COG4043	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_11	phrog_585	94.7	8.8e-28	N/A	unknown function
UniRef90	UHGV-0191520_11	UniRef90_A0A7G5MSN3	134.0	5.68e-38	N/A	N/A
eggNOG-mapper	UHGV-0191520_11	1033744.CAEL01000029_gene1306	99.4	1.34e-24	N/A	N/A
Pfam	UHGV-0191520_11	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0191520_11	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
KOfam	UHGV-0191520_18	K22300	60.6	3.6e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0191520_18	phrog_8	52.7	0.0000000000000086	transcriptional regulator	transcription regulation
UniRef90	UHGV-0191520_18	UniRef90_N1ZZY4	140.0	8.69001e-41	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0191520_18	97139.C824_05937	140.0	1.46001e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0191520_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0191520_18	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0191520_18	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0191520_20	K23779	60.5	4.4e-17	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0191520_20	phrog_3	45.6	0.0000000000025	transcriptional repressor	transcription regulation
UniRef90	UHGV-0191520_20	UniRef90_A0A1M6B7T2	55.5	0.0000000227	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
eggNOG-mapper	UHGV-0191520_20	410358.Mlab_0037	50.4	0.000000345	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0191520_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0191520_20	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
Pfam	UHGV-0191520_21	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0191520_23	phrog_1220	123.4	1.7e-36	head protein	head and packaging
eggNOG-mapper	UHGV-0191520_23	1145276.T479_19910	73.9	0.00000000000282	N/A	N/A
PHROG	UHGV-0191520_24	phrog_538	233.9	0	minor tail protein	tail
UniRef90	UHGV-0191520_24	UniRef90_A0A1I7FBJ0	172.0	0	Virus ReqiPepy6 Gp37-like protein	N/A
eggNOG-mapper	UHGV-0191520_24	428125.CLOLEP_01424	170.0	0	N/A	N/A
Pfam	UHGV-0191520_24	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0191520_24	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_25	phrog_33	57.4	3.4e-16	distal tail protein Dit	tail
UniRef90	UHGV-0191520_25	UniRef90_UPI001D088A46	183.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0191520_25	428125.CLOLEP_01423	117.0	2.07e-28	Phage tail protein	N/A
Pfam	UHGV-0191520_25	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
structural_annotation	UHGV-0191520_25	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0191520_26	K20478	69.6	6.3e-21	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0191520_26	phrog_5218	309.2	0	N/A	unknown function
UniRef90	UHGV-0191520_26	UniRef90_A0A415G8B3	498.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0191520_26	999413.HMPREF1094_02001	346.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0191520_26	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0191520_26	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0191520_26	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_28	phrog_88	93.4	2.2e-27	major tail protein	tail
UniRef90	UHGV-0191520_28	UniRef90_A0A843GGC8	120.0	2.81e-29	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0191520_28	1120971.AUCA01000066_gene599	58.9	0.000000049	Phage tail tube protein	N/A
NCBIFam	UHGV-0191520_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0191520_28	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191520_29	PF05657	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191520_30	TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0191520_31	UniRef90_R5WDX4	128.0	2.55e-36	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0191520_31	1536774.H70357_10645	54.3	0.000000068	N/A	N/A
Pfam	UHGV-0191520_31	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0191520_31	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0191520_31	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0191520_32	UniRef90_UPI001E432EFF	70.1	0.0000000000000659	phage head-tail connector protein	N/A
structural_annotation	UHGV-0191520_32	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_33	phrog_10	163.2	0	major head protein	head and packaging
UniRef90	UHGV-0191520_33	UniRef90_A0A417W9T2	426.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0191520_33	411470.RUMGNA_02065	417.0	0	N/A	N/A
Pfam	UHGV-0191520_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0191520_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0191520_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0191520_33	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0191520_34	K06904	119.5	3.8e-35	N/A	N/A
PHROG	UHGV-0191520_34	phrog_80	151.0	9.80909e-45	head maturation protease	head and packaging
UniRef90	UHGV-0191520_34	UniRef90_R6YQV2	261.0	0	Putative phage prohead protease	N/A
eggNOG-mapper	UHGV-0191520_34	927704.SELR_18200	205.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0191520_34	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0191520_34	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0191520_34	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0191520_34	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_35	phrog_12	134.4	7.69999e-40	portal protein	head and packaging
UniRef90	UHGV-0191520_35	UniRef90_R6Z5U3	450.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0191520_35	457396.CSBG_01047	311.0	0	Portal protein	N/A
Pfam	UHGV-0191520_35	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0191520_35	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0191520_35	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_36	phrog_9	283.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0191520_36	UniRef90_R7A0H4	846.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0191520_36	1211817.CCAT010000007_gene1040	511.0	0	Terminase	N/A
Pfam	UHGV-0191520_36	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0191520_36	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0191520_36	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0191520_36	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0191520_39	K10062	44.2	0.0000000000014	COLEC12; collectin sub-family member 12	N/A
PHROG	UHGV-0191520_39	phrog_6320	61.3	1.8e-17	tail fiber protein	tail
Pfam	UHGV-0191520_39	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0191520_40	K24213	79.3	3.6e-23	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0191520_40	phrog_6320	127.1	1.8e-37	tail fiber protein	tail
Pfam	UHGV-0191520_40	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0191520_41	phrog_4581	104.1	6.1e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0191520_41	UniRef90_A0A417W8X1	306.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0191520_41	97138.C820_00619	200.0	0	HNH endonuclease	N/A
Pfam	UHGV-0191520_41	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0191520_41	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0191520_41	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_42	phrog_51	46.3	0.00000000000011	terminase small subunit	head and packaging
UniRef90	UHGV-0191520_42	UniRef90_UPI001D08E9BA	127.0	6.14e-36	terminase small subunit	N/A
eggNOG-mapper	UHGV-0191520_42	702450.CUW_0530	69.3	0.000000000000146	Terminase Small Subunit	N/A
Pfam	UHGV-0191520_42	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0191520_42	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0191520_42	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0191520_43	K01448	111.9	6.9e-33	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0191520_43	phrog_435	186.7	0	endolysin	lysis
UniRef90	UHGV-0191520_43	UniRef90_A0A6L5Y0L2	271.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0191520_43	1232447.BAHW02000005_gene156	187.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0191520_43	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0191520_43	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0191520_43	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0191520_43	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0191520_44	phrog_1863	80.7	7.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0191520_44	1232453.BAIF02000059_gene1610	76.3	1.79e-17	N/A	N/A
PHROG	UHGV-0191520_45	phrog_881	60.9	1.5e-17	holin	lysis
UniRef90	UHGV-0191520_45	UniRef90_R7EEV6	83.2	1.39e-19	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0191520_45	1095750.HMPREF9970_2289	78.2	2.48e-18	Putative phage holin Dp-1	N/A
Pfam	UHGV-0191520_45	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0191520_45	PF16938	N/A	N/A	N/A	N/A