UHGV-0191714 (vOTU-047187)

Viral Genome: UHGV-0191714

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0191714
vOTU ID	vOTU-047187
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMEA2737822_a1_ct20987@circular@Myoviridae__sp._ctoY3987
Associated BioSample	SAMEA2737822
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9774
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	14.23
Jumbo phage	No

Genome content
Genome length (bp)	43,496
GC content	57.64%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	60
CDS density	92%
Average CDS length (bps)	666.45
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0191714_1	K22300	47.7	0.00000000000029	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0191714_1	phrog_8	53.7	0.0000000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-0191714_1	UniRef90_N2BB17	59.7	0.000000000516	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0191714_1	1235802.C823_00312	59.7	0.0000000000866	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0191714_1	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0191714_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0191714_5	K22300	60.1	5.2e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0191714_5	phrog_8	41.8	0.0000000000045	transcriptional regulator	transcription regulation
UniRef90	UHGV-0191714_5	UniRef90_UPI00189A3C4E	93.2	3.5e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0191714_5	97138.C820_01960	84.3	2.18e-19	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0191714_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0191714_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0191714_5	PF12844,MF_00535,NF007257,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-0191714_8	K14059	193.9	0	int; integrase	N/A
PHROG	UHGV-0191714_8	phrog_1	169.8	0	integrase	integration and excision
UniRef90	UHGV-0191714_8	UniRef90_A0A353J242	187.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0191714_8	246199.CUS_5913	149.0	3.52e-39	Phage integrase family	N/A
Pfam	UHGV-0191714_8	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0191714_8	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0191714_8	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191714_9	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_10	phrog_20016	191.3	0	N/A	unknown function
UniRef90	UHGV-0191714_10	UniRef90_A0A285PT46	184.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0191714_10	397290.C810_05214	161.0	0	N/A	N/A
structural_annotation	UHGV-0191714_10	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_11	phrog_16490	163.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0191714_11	397290.C810_05212	142.0	1.78e-38	N/A	N/A
PHROG	UHGV-0191714_12	phrog_22984	72.1	5.6e-21	N/A	unknown function
PHROG	UHGV-0191714_13	phrog_21718	116.1	2.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0191714_13	397290.C810_05210	104.0	3.7e-26	N/A	N/A
PHROG	UHGV-0191714_14	phrog_3754	94.0	1.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0191714_14	476272.RUMHYD_01764	168.0	0	N/A	N/A
structural_annotation	UHGV-0191714_15	PF08281,TIGR02983	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_16	phrog_199	89.5	3.2e-26	holin	lysis
UniRef90	UHGV-0191714_16	UniRef90_UPI001C00C30F	134.0	1.89e-37	phage holin family protein	N/A
eggNOG-mapper	UHGV-0191714_16	411467.BACCAP_00280	125.0	1.29e-34	Bacteriophage holin family	N/A
Pfam	UHGV-0191714_16	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0191714_16	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0191714_16	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0191714_16	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-0191714_17	UniRef90_A0A2V2FP98	214.0	0	SH3b domain-containing protein	N/A
Pfam	UHGV-0191714_17	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0191714_17	COG3103	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191714_17	PF08239,PF00877,NF008096,COG4991,COG0791	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191714_20	PF16640,NF032891	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191714_21	PF21722	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0191714_23	755731.Clo1100_2421	111.0	3.26e-21	N/A	N/A
structural_annotation	UHGV-0191714_24	PF08703,TIGR04319,COG3524	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_26	phrog_511	63.7	1.8e-18	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0191714_26	1449126.JQKL01000046_gene2081	59.3	0.00000253	N/A	N/A
COG	UHGV-0191714_26	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0191714_26	PF11134,MF_03022,NF010237,TIGR04362,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191714_27	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_29	phrog_1357	236.7	0	major head protein	head and packaging
UniRef90	UHGV-0191714_29	UniRef90_A0A316LK11	238.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0191714_29	935837.JAEK01000054_gene1469	232.0	0	N/A	N/A
Pfam	UHGV-0191714_29	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0191714_29	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0191714_29	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_31	phrog_156	205.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0191714_31	935837.JAEK01000054_gene1466	76.3	0.0000000000129	N/A	N/A
structural_annotation	UHGV-0191714_31	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0191714_32	K06909	120.9	1.3e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0191714_32	phrog_979	159.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0191714_32	UniRef90_UPI0004130EC4	478.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0191714_32	1121091.AUMP01000003_gene2581	478.0	0	Terminase-like family	N/A
Pfam	UHGV-0191714_32	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0191714_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0191714_32	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-0191714_33	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
structural_annotation	UHGV-0191714_33	PF02796,TIGR02844	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_35	phrog_35407	43.7	0.0000000000033	N/A	unknown function
structural_annotation	UHGV-0191714_38	PF07374,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-0191714_39	UniRef90_A0A832L5E4	65.5	0.000000000226	Crossover junction endodeoxyribonuclease RuvC	N/A
eggNOG-mapper	UHGV-0191714_39	536233.CLO_1822	67.0	0.0000000000143	N/A	N/A
structural_annotation	UHGV-0191714_41	TIGR03655	N/A	N/A	N/A	N/A
KOfam	UHGV-0191714_44	K00390	59.7	1.4e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0191714_44	phrog_424	116.4	1.8e-34	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0191714_44	UniRef90_A0A1Q6PWT9	387.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0191714_44	742733.HMPREF9469_00225	260.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0191714_44	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0191714_44	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0191714_44	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_45	phrog_757	184.9	0	DNA methyltransferase	other
UniRef90	UHGV-0191714_45	UniRef90_A0A355KVL2	350.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0191714_45	748224.HMPREF9436_03069	389.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0191714_45	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0191714_45	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-0191714_46	UniRef90_A0A662SF09	59.3	0.00000000226	MazG domain-containing protein	N/A
COG	UHGV-0191714_46	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0191714_46	COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_47	phrog_111	161.1	0	DNA methyltransferase	other
UniRef90	UHGV-0191714_47	UniRef90_A0A1G8EL36	222.0	0	Site-specific DNA-methyltransferase (Adenine-specific)	N/A
eggNOG-mapper	UHGV-0191714_47	411468.CLOSCI_00567	205.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0191714_47	oMTase_00015	212.4	0	orphan methyltransferase	RM
Pfam	UHGV-0191714_47	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0191714_47	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
KOfam	UHGV-0191714_48	K03111	170.4	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0191714_48	phrog_44	160.5	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0191714_48	UniRef90_A0A1Q6Q4S4	194.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0191714_48	1042163.BRLA_c031440	137.0	7.90999e-40	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0191714_48	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0191714_48	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0191714_48	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0191714_48	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0191714_48	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_49	phrog_824	148.9	1.4013e-44	N/A	unknown function
UniRef90	UHGV-0191714_49	UniRef90_A0A645FWL0	158.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0191714_49	665956.HMPREF1032_00132	131.0	2.06e-37	VRR_NUC	N/A
Pfam	UHGV-0191714_49	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0191714_51	phrog_9804	143.3	1.3004e-42	N/A	unknown function
UniRef90	UHGV-0191714_51	UniRef90_UPI0015C5D332	159.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0191714_51	1121344.JHZO01000003_gene981	138.0	3.57e-38	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0191714_51	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0191714_51	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_52	phrog_15768	60.2	4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0191714_52	1121344.JHZO01000003_gene982	62.8	0.00000000643	N/A	N/A
Pfam	UHGV-0191714_52	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0191714_52	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_53	phrog_18107	115.5	5.2e-34	N/A	unknown function
UniRef90	UHGV-0191714_53	UniRef90_UPI00058F46CC	117.0	8.88e-30	N/A	N/A
eggNOG-mapper	UHGV-0191714_53	1449050.JNLE01000003_gene3912	102.0	1e-24	N/A	N/A
structural_annotation	UHGV-0191714_53	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_54	phrog_2872	207.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0191714_54	UniRef90_UPI00082B1175	223.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0191714_54	1345695.CLSA_c30180	210.0	0	AAA domain	N/A
Pfam	UHGV-0191714_54	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0191714_54	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191714_57	PF20800	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191714_59	PF13443,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0191714_60	phrog_4433	119.5	5.04467e-44	N/A	unknown function
eggNOG-mapper	UHGV-0191714_60	665950.HMPREF1025_01373	128.0	7.02e-33	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0191714_60	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0191714_60	NF007410	N/A	N/A	N/A	N/A