UHGV-0191843 (vOTU-030016)

Viral Genome: UHGV-0191843

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0191843
vOTU ID	vOTU-030016
Representative Genome?	Yes
Source	GPD
Original genome ID	uvig_596363
Associated BioSample	SAMN09781786
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.05 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9607
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	8.8
Jumbo phage	No

Genome content
Genome length (bp)	23,339
GC content	57.49%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	37
CDS density	94%
Average CDS length (bps)	591.00
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0191843_3	phrog_422	274.1	0	major head protein	head and packaging
UniRef90	UHGV-0191843_3	UniRef90_UPI0018750F33	453.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0191843_3	663278.Ethha_1589	373.0	0	N/A	N/A
structural_annotation	UHGV-0191843_3	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_4	phrog_541	58.8	9.5e-17	head-tail adaptor	connector
eggNOG-mapper	UHGV-0191843_4	1294142.CINTURNW_1031	91.3	3.69e-22	N/A	N/A
PHROG	UHGV-0191843_5	phrog_8710	104.2	8e-31	N/A	unknown function
eggNOG-mapper	UHGV-0191843_5	1507.HMPREF0262_01181	105.0	5.4e-28	N/A	N/A
structural_annotation	UHGV-0191843_5	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0191843_6	742740.HMPREF9474_03509	99.8	2.54e-25	N/A	N/A
PHROG	UHGV-0191843_7	phrog_2595	51.4	0.000000000000018	head-tail connector protein	connector
eggNOG-mapper	UHGV-0191843_7	1507.HMPREF0262_01183	88.2	1.33e-20	N/A	N/A
structural_annotation	UHGV-0191843_7	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_8	phrog_820	131.1	5e-39	major tail protein	tail
eggNOG-mapper	UHGV-0191843_8	1507.HMPREF0262_01184	202.0	0	domain, Protein	N/A
COG	UHGV-0191843_8	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191843_8	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_9	phrog_8300	82.6	3.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0191843_9	1507.HMPREF0262_00213	98.6	2.2e-25	N/A	N/A
structural_annotation	UHGV-0191843_9	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_10	phrog_8355	65.6	4.4e-19	N/A	unknown function
UniRef90	UHGV-0191843_10	UniRef90_UPI0018A7EA5D	120.0	2.15e-32	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0191843_10	1507.HMPREF0262_01186	100.0	1.87e-25	N/A	N/A
structural_annotation	UHGV-0191843_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_11	phrog_1535	145.2	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0191843_11	665956.HMPREF1032_03628	234.0	0	domain protein	N/A
COG	UHGV-0191843_11	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_12	phrog_1194	52.3	0.0000000000000091	N/A	unknown function
eggNOG-mapper	UHGV-0191843_12	411471.SUBVAR_06933	114.0	5.36e-31	N/A	N/A
structural_annotation	UHGV-0191843_12	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0191843_15	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_16	phrog_1419	54.9	5.8e-16	tail protein	tail
UniRef90	UHGV-0191843_16	UniRef90_UPI0018835F0C	214.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0191843_16	476272.RUMHYD_00002	106.0	1.62e-21	N/A	N/A
KOfam	UHGV-0191843_18	K19304	124.5	1.1e-36	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0191843_18	phrog_10030	103.8	6.7e-31	tail length tape measure protein	tail
UniRef90	UHGV-0191843_18	UniRef90_A0A3D1PRD1	322.0	0	Peptidase_M23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0191843_18	1382304.JNIL01000001_gene2694	100.0	8.48e-22	G5	N/A
Pfam	UHGV-0191843_18	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0191843_18	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0191843_18	PF01551,NF040883	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_19	phrog_1863	74.8	6.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0191843_19	665956.HMPREF1032_03922	98.6	4.95e-26	N/A	N/A
PHROG	UHGV-0191843_20	phrog_1129	63.3	3e-18	holin	lysis
UniRef90	UHGV-0191843_20	UniRef90_A0A367FT42	166.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0191843_20	1007096.BAGW01000036_gene2663	110.0	1.58e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0191843_20	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0191843_20	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0191843_21	K06400	365.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0191843_21	phrog_95	370.0	0	integrase	integration and excision
UniRef90	UHGV-0191843_21	UniRef90_UPI001D0F283A	613.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0191843_21	718252.FP2_01160	590.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0191843_21	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0191843_21	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0191843_21	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0191843_21	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0191843_21	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_22	phrog_6988	137.2	5.29999e-41	N/A	unknown function
UniRef90	UHGV-0191843_22	UniRef90_A0A6N7TNH0	205.0	0	N/A	N/A
eggNOG-mapper	UHGV-0191843_22	445974.CLORAM_02972	144.0	1.46015e-42	N/A	N/A
PADLOC	UHGV-0191843_22	ThsB1_00002	43.8	0.0000000000062	TIR-like	Thoeris
Pfam	UHGV-0191843_22	PF08937	N/A	N/A	Thoeris protein ThsB, TIR-like domain	ThsB_TIR
structural_annotation	UHGV-0191843_22	PF08937,MF_03036,TIGR03646,COG0758	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_23	phrog_419	77.3	3.3e-24	N/A	unknown function
UniRef90	UHGV-0191843_23	UniRef90_UPI001CBFD05B	112.0	2.69e-31	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-0191843_23	203119.Cthe_2457	99.4	5.91e-27	N/A	N/A
structural_annotation	UHGV-0191843_23	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_24	phrog_7395	136.6	9.10003e-41	N/A	unknown function
UniRef90	UHGV-0191843_24	UniRef90_A0A6N7TQQ3	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0191843_24	886882.PPSC2_c2958	129.0	2.13e-35	N/A	N/A
Pfam	UHGV-0191843_24	PF14015	N/A	N/A	N/A	DUF4231
NCBIFam	UHGV-0191843_24	NF033634.1	N/A	N/A	SLATT domain-containing protein	N/A
KOfam	UHGV-0191843_25	K03466	236.7	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-0191843_25	phrog_1358	128.7	2.3e-38	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0191843_25	UniRef90_A0A3A6JY26	335.0	0	N/A	N/A
eggNOG-mapper	UHGV-0191843_25	411471.SUBVAR_05502	223.0	0	Belongs to the FtsK SpoIIIE SftA family	N/A
PADLOC	UHGV-0191843_25	ZorD1_00005	80.6	1.5e-23	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0191843_25	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
Pfam	UHGV-0191843_25	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
Pfam	UHGV-0191843_25	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0191843_25	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
PHROG	UHGV-0191843_26	phrog_87	46.5	0.00000000000048	metallo-protease	other
UniRef90	UHGV-0191843_26	UniRef90_UPI001C3AA0FC	129.0	1.4e-35	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0191843_26	663278.Ethha_2376	94.7	5.51e-23	N/A	N/A
structural_annotation	UHGV-0191843_26	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0191843_27	K22299	48.6	0.00000000000018	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0191843_27	phrog_8	43.1	0.0000000000087	transcriptional regulator	transcription regulation
UniRef90	UHGV-0191843_27	UniRef90_A0A372V3Y4	98.6	2.55e-24	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0191843_27	97138.C820_00203	55.5	0.0000000534	Transcriptional	N/A
Pfam	UHGV-0191843_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0191843_27	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0191843_27	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0191843_28	UniRef90_A0A1C5ZI76	53.5	0.0000000586	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0191843_28	1226322.HMPREF1545_00148	61.2	0.0000000000288	Transcriptional	N/A
Pfam	UHGV-0191843_28	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0191843_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
COG	UHGV-0191843_33	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
structural_annotation	UHGV-0191843_33	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_35	phrog_1733	70.1	2.2e-20	N/A	unknown function
UniRef90	UHGV-0191843_35	UniRef90_UPI00196846D9	214.0	0	cell envelope integrity protein TolA	N/A
eggNOG-mapper	UHGV-0191843_35	665956.HMPREF1032_03597	229.0	0	DNA binding	N/A
COG	UHGV-0191843_35	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0191843_35	PF03677	N/A	N/A	N/A	N/A
KOfam	UHGV-0191843_36	K03546	47.0	0.00000000000022	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0191843_36	phrog_1499	454.4	0	N/A	unknown function
UniRef90	UHGV-0191843_36	UniRef90_A0A367GHQ5	811.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-0191843_36	1235798.C817_04766	509.0	0	AAA ATPase domain	N/A
Pfam	UHGV-0191843_36	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0191843_36	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0191843_36	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0191843_37	phrog_124	229.6	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0191843_37	UniRef90_UPI00122C2B12	422.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0191843_37	608534.GCWU000341_02312	327.0	0	AAA domain	N/A
Pfam	UHGV-0191843_37	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0191843_37	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A