UHGV-0192149 (vOTU-121947)

Viral Genome: UHGV-0192149

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0192149
vOTU ID	vOTU-121947
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781749_a1_ct50393_vs1@Siphoviridae__sp._ct7hx1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	58.42 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9773
Virus hallmark genes (geNomad)	1
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	12.61
Jumbo phage	No

Genome content
Genome length (bp)	26,417
GC content	40.61%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	35
CDS density	93%
Average CDS length (bps)	701.14
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0192149_1	phrog_8841	534.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192149_1	UniRef90_A0A7U9JR13	707.0	0	DNA/RNA helicase, superfamily II	N/A
eggNOG-mapper	UHGV-0192149_1	1304866.K413DRAFT_0823	707.0	0	N/A	N/A
Pfam	UHGV-0192149_1	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0192149_1	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0192149_1	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192149_1	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0192149_2	K02316	66.2	5.1e-19	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0192149_2	phrog_11992	157.8	0	N/A	unknown function
UniRef90	UHGV-0192149_2	UniRef90_A0A395X7I4	272.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0192149_2	476272.RUMHYD_01741	194.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-0192149_2	drt-UG29	55.5	6.1e-16	DRT	DRT
Pfam	UHGV-0192149_2	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0192149_2	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0192149_2	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_3	phrog_3490	143.7	9.09443e-43	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192149_3	UniRef90_A0A395XB48	316.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192149_3	357809.Cphy_2986	217.0	0	N/A	N/A
Pfam	UHGV-0192149_3	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0192149_3	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0192149_4	K03111	134.0	1.7e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0192149_4	phrog_44	139.0	3.20001e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192149_4	UniRef90_A0A412ELG8	221.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0192149_4	658655.HMPREF0988_02584	172.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0192149_4	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0192149_4	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0192149_4	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0192149_4	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0192149_4	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_5	phrog_155	140.9	7.90052e-42	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192149_5	UniRef90_A0A1V5UPJ3	180.0	0	ERF superfamily protein	N/A
eggNOG-mapper	UHGV-0192149_5	762982.HMPREF9442_00551	171.0	0	Erf family	N/A
Pfam	UHGV-0192149_5	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0192149_5	PF04404,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192149_6	UniRef90_R6RDX0	81.3	6.4e-19	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-0192149_7	phrog_253	118.1	6.5e-35	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192149_7	UniRef90_UPI001C3A3B51	179.0	0	Siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0192149_7	411470.RUMGNA_02192	171.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-0192149_7	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0192149_7	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_11	phrog_6058	49.8	0.000000000000041	N/A	unknown function
UniRef90	UHGV-0192149_11	UniRef90_A0A4Q7P3C7	66.6	0.00000000000269	Prolyl-tRNA synthetase	N/A
eggNOG-mapper	UHGV-0192149_11	665956.HMPREF1032_00623	71.2	0.00000000000000692	N/A	N/A
PHROG	UHGV-0192149_12	phrog_14105	256.7	0	N/A	unknown function
UniRef90	UHGV-0192149_12	UniRef90_U2BMS0	245.0	0	Pentapeptide repeat protein	N/A
eggNOG-mapper	UHGV-0192149_12	97138.C820_00368	176.0	0	PPE family	N/A
Pfam	UHGV-0192149_12	PF01469	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide_2
COG	UHGV-0192149_12	COG5651	N/A	N/A	PPE-repeat protein	N/A
structural_annotation	UHGV-0192149_16	PF13601,TIGR04176	N/A	N/A	N/A	N/A
KOfam	UHGV-0192149_19	K18830	65.6	8.9e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0192149_19	phrog_8	52.6	0.0000000000000092	transcriptional regulator	transcription regulation
UniRef90	UHGV-0192149_19	UniRef90_A0A1C6C9V1	170.0	0	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-0192149_19	665956.HMPREF1032_00148	96.3	5.17e-24	N/A	N/A
PADLOC	UHGV-0192149_19	retron_type_VI_hth_cluster2_1	43.3	0.0000000000064	N/A	Retron
Pfam	UHGV-0192149_19	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0192149_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0192149_19	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192149_20	PF02701,NF041869	N/A	N/A	N/A	N/A
KOfam	UHGV-0192149_24	K14059	92.4	7.5e-27	int; integrase	N/A
PHROG	UHGV-0192149_24	phrog_1	126.0	3.8e-37	integrase	integration and excision
UniRef90	UHGV-0192149_24	UniRef90_A0A6L8SXX0	568.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0192149_24	1235792.C808_05256	377.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0192149_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0192149_24	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0192149_24	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_25	phrog_9589	52.5	0.0000000000000094	endolysin	lysis
UniRef90	UHGV-0192149_25	UniRef90_A0A412SB50	499.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0192149_25	476272.RUMHYD_01851	223.0	0	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-0192149_25	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-0192149_25	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0192149_25	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0192149_25	PF08239,PF09953,NF040678,COG3942,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_26	phrog_5240	47.8	0.000000000000059	tail fiber protein	tail
eggNOG-mapper	UHGV-0192149_26	556261.HMPREF0240_03316	164.0	7.00649e-44	GDSL-like Lipase/Acylhydrolase	N/A
PHROG	UHGV-0192149_28	phrog_6616	506.8	0	tail protein	tail
UniRef90	UHGV-0192149_28	UniRef90_A0A395X7B3	884.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192149_28	33035.JPJF01000043_gene1002	258.0	0	N/A	N/A
Pfam	UHGV-0192149_28	PF21446	N/A	N/A	Long-tail fiber proximal subunit, C-terminal domain	Gp34_C
Pfam	UHGV-0192149_28	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0192149_28	PF05113,PF18957,PF16407,NF033848,NF011782,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192149_29	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_30	phrog_1535	330.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0192149_30	UniRef90_A0A174LLY7	548.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0192149_30	411459.RUMOBE_01384	321.0	0	phage tail tape measure protein	N/A
COG	UHGV-0192149_30	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0192149_31	phrog_706	109.6	2.4e-32	N/A	unknown function
UniRef90	UHGV-0192149_31	UniRef90_UPI001C0F2CC6	283.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0192149_31	411459.RUMOBE_01383	209.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0192149_31	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0192149_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_32	phrog_11299	83.4	3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0192149_32	411459.RUMOBE_01382	68.6	0.000000000000818	N/A	N/A
structural_annotation	UHGV-0192149_32	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_33	phrog_3099	117.0	1.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0192149_33	33035.JPJF01000106_gene3126	189.0	0	N/A	N/A
structural_annotation	UHGV-0192149_33	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_34	phrog_3266	90.9	1.1e-26	tail completion	connector
eggNOG-mapper	UHGV-0192149_34	476272.RUMHYD_01781	157.0	0	N/A	N/A
structural_annotation	UHGV-0192149_34	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0192149_35	phrog_3366	57.8	2.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0192149_35	476272.RUMHYD_01779	110.0	1.8e-29	N/A	N/A