UHGV-0192709 (vOTU-047220)

Viral Genome: UHGV-0192709

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0192709
vOTU ID	vOTU-047220
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781741_a1_ct77446_vs1@Myoviridae__sp._ct41G1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	ITR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	8
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.967
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	11.56
Jumbo phage	No

Genome content
Genome length (bp)	39,903
GC content	59.41%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	46
CDS density	93%
Average CDS length (bps)	804.85
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0192709_1	phrog_4433	157.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0192709_1	665950.HMPREF1025_01373	102.0	5.35e-23	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0192709_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-0192709_3	phrog_3584	187.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192709_3	UniRef90_I2E8X7	107.0	2.61e-24	Gp31	N/A
eggNOG-mapper	UHGV-0192709_3	1415774.U728_484	109.0	1.79e-25	N/A	N/A
KOfam	UHGV-0192709_5	K06909	130.4	1.7e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0192709_5	phrog_979	133.4	1.10002e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0192709_5	UniRef90_UPI0006875436	574.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0192709_5	1410650.JHWL01000003_gene2834	574.0	0	N/A	N/A
Pfam	UHGV-0192709_5	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0192709_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0192709_5	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0192709_6	phrog_156	278.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0192709_6	1410650.JHWL01000003_gene2833	457.0	0	N/A	N/A
structural_annotation	UHGV-0192709_6	PF16510,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0192709_7	phrog_13908	216.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0192709_7	748224.HMPREF9436_01398	75.5	0.00000000000229	Cysteine protease Prp	N/A
COG	UHGV-0192709_7	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0192709_8	phrog_1357	201.3	0	major head protein	head and packaging
UniRef90	UHGV-0192709_8	UniRef90_A0A3D5TGP8	305.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0192709_8	1410650.JHWL01000003_gene2830	269.0	0	N/A	N/A
Pfam	UHGV-0192709_8	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0192709_8	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0192709_8	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0192709_10	phrog_12105	120.5	8.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-0192709_10	1519439.JPJG01000060_gene1891	60.8	0.000000000366	N/A	N/A
PHROG	UHGV-0192709_11	phrog_511	218.2	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0192709_11	1410650.JHWL01000003_gene2827	300.0	0	N/A	N/A
structural_annotation	UHGV-0192709_11	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192709_12	UniRef90_R5DCX9	145.0	5.25e-36	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192709_12	411483.FAEPRAA2165_01035	77.0	0.00000000000219	N/A	N/A
PHROG	UHGV-0192709_13	phrog_22978	654.3	0	N/A	unknown function
UniRef90	UHGV-0192709_13	UniRef90_A0A416JVP5	630.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192709_13	1321782.HMPREF1986_00356	488.0	0	N/A	N/A
Pfam	UHGV-0192709_13	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-0192709_14	phrog_1330	65.7	9e-20	tail protein	tail
eggNOG-mapper	UHGV-0192709_14	1345695.CLSA_c22960	65.9	0.0000000316	N/A	N/A
Pfam	UHGV-0192709_14	PF02018	N/A	N/A	Carbohydrate binding domain	CBM_4_9
COG	UHGV-0192709_14	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0192709_15	phrog_18593	51.6	0.000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0192709_15	411460.RUMTOR_02099	55.1	0.00000235	N/A	N/A
structural_annotation	UHGV-0192709_16	PF10651,NF033814	N/A	N/A	N/A	N/A
KOfam	UHGV-0192709_17	K22519	45.5	0.0000000000011	PTAC5; protein disulfide-isomerase [EC:5.3.4.1]	N/A
PHROG	UHGV-0192709_17	phrog_1493	46.0	0.00000000000071	endolysin	lysis
UniRef90	UHGV-0192709_17	UniRef90_A0A7V6H3L9	145.0	5.1e-38	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192709_17	986075.CathTA2_0160	61.2	0.0000000204	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-0192709_17	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0192709_17	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0192709_17	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0192709_17	PF01471,PF00877,TIGR02869,NF033742,COG3409,COG0791	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0192709_19	411470.RUMGNA_00254	98.6	1.74e-25	N/A	N/A
Pfam	UHGV-0192709_20	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0192709_20	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-0192709_20	PF00196,MF_00674,TIGR02985,COG2771	N/A	N/A	N/A	N/A
Pfam	UHGV-0192709_21	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0192709_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0192709_21	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
NCBIFam	UHGV-0192709_21	TIGR04111.1	N/A	N/A	phage-associated protein, BcepMu gp16 family	N/A
COG	UHGV-0192709_21	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
KOfam	UHGV-0192709_25	K06400	256.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0192709_25	phrog_95	265.5	0	integrase	integration and excision
UniRef90	UHGV-0192709_25	UniRef90_A0A542AKB8	369.0	0	DNA invertase Pin-like site-specific DNA recombinase	N/A
eggNOG-mapper	UHGV-0192709_25	1449050.JNLE01000005_gene3962	331.0	0	Recombinase	N/A
Pfam	UHGV-0192709_25	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0192709_25	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0192709_25	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0192709_25	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0192709_25	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192709_26	UniRef90_R5HRH2	53.9	0.0000031	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0192709_26	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0192709_26	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0192709_29	K22300	57.6	2.9e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0192709_29	phrog_8	45.5	0.0000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0192709_29	UniRef90_R5R2P6	84.3	1.73e-18	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0192709_29	1235790.C805_00012	73.2	0.00000000000000649	Helix-turn-helix domain	N/A
Pfam	UHGV-0192709_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0192709_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0192709_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
Pfam	UHGV-0192709_32	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
UniRef90	UHGV-0192709_33	UniRef90_A0A2G2MNK7	65.1	0.00000000000158	Arc domain-containing protein	N/A
eggNOG-mapper	UHGV-0192709_33	1151292.QEW_4373	58.5	0.0000000000809	Arc-like DNA binding domain	N/A
Pfam	UHGV-0192709_33	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
structural_annotation	UHGV-0192709_33	PF03869,NF008671,COG4877	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192709_34	PF12441,NF041793,COG4710	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192709_36	UniRef90_UPI001A8C023C	65.1	0.00000000000124	Arc family DNA-binding protein	N/A
eggNOG-mapper	UHGV-0192709_36	1121121.KB894312_gene3201	58.9	0.0000000000543	N/A	N/A
structural_annotation	UHGV-0192709_36	PF03869,NF008671,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-0192709_46	phrog_4433	192.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0192709_46	665950.HMPREF1025_01373	117.0	2.06e-28	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0192709_46	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A