Overview | |
---|---|
UHGV ID | UHGV-0193153 |
vOTU ID | vOTU-129828 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SAMN05827113_a1_ct42551_vs1@linear@Unclassified_virus__sp._ctPUf1 |
Associated BioSample | SAMN05827113 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 42.77 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 12 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9786 |
Virus hallmark genes (geNomad) | 4 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 33.18 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 16,833 |
GC content | 36.13% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 23 |
CDS density | 94% |
Average CDS length (bps) | 685.04 |
Total tRNA genes | 1 |
Suppressor tRNA genes | 0 |