UHGV-0193458 (vOTU-047243)

Viral Genome: UHGV-0193458

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0193458
vOTU ID	vOTU-047243
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781724_a1_ct14641_vs1@Myoviridae__sp._ctg3g1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9749
Virus hallmark genes (geNomad)	5
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	17.92
Jumbo phage	No

Genome content
Genome length (bp)	43,440
GC content	38.14%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	69
CDS density	93%
Average CDS length (bps)	585.52
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0193458_5	phrog_21026	51.7	0.000000000000014	N/A	unknown function
PHROG	UHGV-0193458_7	phrog_2245	68.2	1.3e-19	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0193458_7	658655.HMPREF0988_00885	53.9	0.0000000442	N/A	N/A
UniRef90	UHGV-0193458_9	UniRef90_K1SN71	48.9	0.00000404	HTH_30 domain-containing protein	N/A
COG	UHGV-0193458_9	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0193458_9	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_10	phrog_36	60.6	3.1e-17	transcriptional regulator	transcription regulation
Pfam	UHGV-0193458_10	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0193458_10	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0193458_10	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0193458_13	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_14	phrog_15863	169.1	0	N/A	unknown function
UniRef90	UHGV-0193458_14	UniRef90_A0A417HVZ9	167.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0193458_14	693746.OBV_01780	157.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0193458_14	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
UniRef90	UHGV-0193458_16	UniRef90_G9YS61	50.1	0.0000015	Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein	N/A
Pfam	UHGV-0193458_16	PF05534	N/A	N/A	HicB family	HicB
structural_annotation	UHGV-0193458_16	PF03869,NF010256	N/A	N/A	N/A	N/A
KOfam	UHGV-0193458_17	K07474	97.2	3.1e-28	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0193458_17	phrog_51	106.3	2.6e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0193458_17	UniRef90_UPI00045EAA25	106.0	6.82e-26	terminase small subunit	N/A
eggNOG-mapper	UHGV-0193458_17	1298920.KI911353_gene4857	106.0	1.38e-26	Terminase small subunit	N/A
Pfam	UHGV-0193458_17	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0193458_17	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0193458_17	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0193458_18	K21523	54.6	1e-27	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0193458_18	phrog_2	94.9	1.1e-27	terminase large subunit	head and packaging
UniRef90	UHGV-0193458_18	UniRef90_R5AHR8	601.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0193458_18	693746.OBV_23980	516.0	0	phage Terminase large subunit	N/A
COG	UHGV-0193458_18	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0193458_18	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_19	phrog_156	241.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0193458_19	693746.OBV_23930	496.0	0	N/A	N/A
structural_annotation	UHGV-0193458_19	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193458_21	693746.OBV_23910	60.5	0.000000139	N/A	N/A
PHROG	UHGV-0193458_22	phrog_24113	53.0	0.0000000000000039	N/A	unknown function
structural_annotation	UHGV-0193458_22	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_23	phrog_371	135.3	3.20001e-40	major head protein	head and packaging
UniRef90	UHGV-0193458_23	UniRef90_UPI001C11985C	488.0	0	Mu-like prophage major head subunit gpT family protein	N/A
eggNOG-mapper	UHGV-0193458_23	1519439.JPJG01000060_gene1890	280.0	0	N/A	N/A
Pfam	UHGV-0193458_23	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0193458_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_24	phrog_13046	52.1	0.0000000000000072	N/A	unknown function
eggNOG-mapper	UHGV-0193458_24	693746.OBV_23880	126.0	1.92e-33	N/A	N/A
structural_annotation	UHGV-0193458_24	PF20387	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193458_25	665956.HMPREF1032_03917	513.0	0	N/A	N/A
structural_annotation	UHGV-0193458_25	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_26	phrog_32680	41.9	0.0000000000057	tail fiber protein	tail
PHROG	UHGV-0193458_29	phrog_2310	63.4	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0193458_29	756499.Desde_1351	54.7	0.000000000973	N/A	N/A
eggNOG-mapper	UHGV-0193458_31	641524.ADICYQ_1391	114.0	1.68e-24	lipolytic protein G-D-S-L family	N/A
COG	UHGV-0193458_31	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0193458_32	phrog_1863	73.3	1.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0193458_32	748224.HMPREF9436_00408	107.0	7.54e-30	N/A	N/A
PHROG	UHGV-0193458_33	phrog_1129	66.8	2.2e-19	holin	lysis
UniRef90	UHGV-0193458_33	UniRef90_UPI001C1096AE	143.0	7.32879e-43	phage holin family protein	N/A
eggNOG-mapper	UHGV-0193458_33	702450.CUW_0551	105.0	7.11e-29	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0193458_33	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0193458_33	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0193458_34	K17733	114.0	1.2e-33	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0193458_34	phrog_6523	134.0	1.2e-39	endolysin	lysis
UniRef90	UHGV-0193458_34	UniRef90_F2JNY6	172.0	0	Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin	N/A
eggNOG-mapper	UHGV-0193458_34	642492.Clole_1880	172.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0193458_34	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0193458_34	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0193458_34	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0193458_35	PF09486,NF038305	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_36	phrog_9854	124.2	6.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0193458_36	1121091.AUMP01000003_gene2597	273.0	0	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis	N/A
Pfam	UHGV-0193458_36	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0193458_36	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0193458_36	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
Pfam	UHGV-0193458_37	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0193458_37	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193458_40	445972.ANACOL_01884	56.2	0.0000000182	N/A	N/A
KOfam	UHGV-0193458_41	K14059	156.6	0	int; integrase	N/A
PHROG	UHGV-0193458_41	phrog_1	167.6	0	integrase	integration and excision
UniRef90	UHGV-0193458_41	UniRef90_UPI001C109D33	464.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0193458_41	1462527.CCDM010000010_gene473	305.0	0	Phage integrase family	N/A
Pfam	UHGV-0193458_41	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0193458_41	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0193458_41	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0193458_43	UniRef90_A0A3R6WTB1	73.9	0.0000000000246	YHYH domain-containing protein	N/A
eggNOG-mapper	UHGV-0193458_43	1163671.JAGI01000002_gene1685	89.0	2.17e-18	Flagellar rod assembly protein muramidase FlgJ	N/A
COG	UHGV-0193458_43	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
KOfam	UHGV-0193458_45	K18830	59.0	9.5e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0193458_45	phrog_4	54.2	0.0000000000000031	transcriptional repressor	transcription regulation
UniRef90	UHGV-0193458_45	UniRef90_A0A173S0H0	120.0	1.33e-32	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0193458_45	97138.C820_01960	118.0	1.44e-32	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0193458_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0193458_45	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0193458_45	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0193458_52	411461.DORFOR_00023	62.4	0.00000000000318	N/A	N/A
structural_annotation	UHGV-0193458_53	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_60	phrog_674	93.8	1e-27	N/A	unknown function
UniRef90	UHGV-0193458_60	UniRef90_A0A7X9AE52	155.0	1.23034e-42	N/A	N/A
eggNOG-mapper	UHGV-0193458_60	1127692.HMPREF9075_00081	90.5	1.77e-18	N/A	N/A
Pfam	UHGV-0193458_60	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0193458_60	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_61	phrog_7838	127.4	1.2e-37	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193458_61	UniRef90_A0A8D9UGW3	173.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0193458_61	742767.HMPREF9456_02052	190.0	0	N/A	N/A
structural_annotation	UHGV-0193458_61	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_62	phrog_72	66.4	3.7e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193458_62	UniRef90_UPI000C7BF263	130.0	2.77e-35	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0193458_62	445972.ANACOL_01825	117.0	1.07e-30	N/A	N/A
structural_annotation	UHGV-0193458_62	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_63	phrog_7566	85.9	2.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0193458_63	1443125.Z962_p0035	56.2	0.0000000101	endonuclease activity	N/A
COG	UHGV-0193458_63	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0193458_64	K01160	58.3	2.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0193458_64	phrog_140	138.8	2.29995e-41	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193458_64	UniRef90_A0A136WJ13	156.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0193458_64	857293.CAAU_0790	115.0	3.88e-31	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0193458_64	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0193458_64	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0193458_64	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_65	phrog_10469	109.9	2e-32	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193458_65	UniRef90_A0A350TWM2	158.0	7.28675e-44	N/A	N/A
eggNOG-mapper	UHGV-0193458_65	97138.C820_00775	137.0	2.95e-36	DnaD domain protein	N/A
Pfam	UHGV-0193458_65	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0193458_65	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0193458_66	phrog_9804	169.7	0	N/A	unknown function
UniRef90	UHGV-0193458_66	UniRef90_R6M669	158.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0193458_66	1121344.JHZO01000003_gene981	134.0	3.92e-37	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-0193458_66	cluster_137185	41.6	0.00000101	NA	N/A
Pfam	UHGV-0193458_66	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0193458_66	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0193458_67	K03111	144.4	1.00053e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0193458_67	phrog_44	141.0	6.60012e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0193458_67	UniRef90_A0A2V2C1N3	222.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0193458_67	97138.C820_02339	190.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0193458_67	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0193458_67	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0193458_67	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0193458_67	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0193458_67	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0193458_69	phrog_14105	63.6	2.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0193458_69	573061.Clocel_3578	60.8	0.00000000563	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0193458_69	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A