UHGV-0196903 (vOTU-095403)

Viral Genome: UHGV-0196903

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0196903
vOTU ID	vOTU-095403
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN00993240_a1_ct48704_vs1@linear@Siphoviridae__sp._ctJqY1
Associated BioSample	SAMN00993240
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.97 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	13
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9757
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	32.62
Jumbo phage	No

Genome content
Genome length (bp)	21,369
GC content	45.38%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	30
CDS density	97%
Average CDS length (bps)	689.20
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.97)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0196903_1	1304866.K413DRAFT_0769	56.2	0.000000033	N/A	N/A
KOfam	UHGV-0196903_3	K13276	63.8	1.2e-18	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0196903_3	phrog_11157	209.9	0	N/A	unknown function
UniRef90	UHGV-0196903_3	UniRef90_A0A6N7W8H3	383.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-0196903_3	1304866.K413DRAFT_0771	303.0	0	N/A	N/A
Pfam	UHGV-0196903_3	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0196903_3	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0196903_3	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_4	phrog_18725	66.9	3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0196903_4	585501.HMPREF6123_0822	116.0	1.11e-30	N/A	N/A
PHROG	UHGV-0196903_5	phrog_13879	279.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0196903_5	742740.HMPREF9474_03516	596.0	0	N/A	N/A
structural_annotation	UHGV-0196903_5	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_6	phrog_1194	85.4	5e-25	N/A	unknown function
eggNOG-mapper	UHGV-0196903_6	742740.HMPREF9474_03515	119.0	6.05e-33	N/A	N/A
Pfam	UHGV-0196903_6	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0196903_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0196903_7	1408311.JNJM01000007_gene932	166.0	1.4013e-45	N/A	N/A
NCBIFam	UHGV-0196903_7	NF038353.1	N/A	N/A	FxLYD domain-containing protein	N/A
structural_annotation	UHGV-0196903_7	PF07233,NF038353,COG5633	N/A	N/A	N/A	N/A
KOfam	UHGV-0196903_8	K10421	63.6	1.6e-18	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0196903_8	phrog_1535	315.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0196903_8	UniRef90_A0A1C5ZQF8	702.0	0	ATPase involved in DNA repair	N/A
eggNOG-mapper	UHGV-0196903_8	411902.CLOBOL_00126	144.0	8.65e-32	N/A	N/A
COG	UHGV-0196903_8	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0196903_9	phrog_2066	60.8	9.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0196903_9	1235800.C819_00477	74.3	0.00000000000000426	N/A	N/A
PHROG	UHGV-0196903_10	phrog_183	54.7	0.0000000000000014	tail chaperone protein	tail
UniRef90	UHGV-0196903_10	UniRef90_UPI001E51FC16	119.0	1.1e-31	N/A	N/A
eggNOG-mapper	UHGV-0196903_10	1235800.C819_00478	140.0	1.99e-40	N/A	N/A
Pfam	UHGV-0196903_10	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0196903_10	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_11	phrog_158	60.0	4.9e-17	major tail protein	tail
UniRef90	UHGV-0196903_11	UniRef90_A0A6N7W6L4	257.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0196903_11	742733.HMPREF9469_01817	179.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0196903_11	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0196903_11	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_12	phrog_78	49.1	0.0000000000001	tail terminator	connector
eggNOG-mapper	UHGV-0196903_12	1499683.CCFF01000014_gene3904	160.0	0	N/A	N/A
structural_annotation	UHGV-0196903_12	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_13	phrog_5	78.4	1.2e-22	tail completion or Neck1 protein	connector
UniRef90	UHGV-0196903_13	UniRef90_A0A173WPF3	204.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0196903_13	742733.HMPREF9469_01819	188.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
NCBIFam	UHGV-0196903_13	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0196903_13	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_14	phrog_2168	104.4	4.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0196903_14	742733.HMPREF9469_01820	99.0	4.53e-25	N/A	N/A
structural_annotation	UHGV-0196903_14	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_15	phrog_132	72.3	5.2e-21	head-tail adaptor	connector
UniRef90	UHGV-0196903_15	UniRef90_UPI001D06FE42	156.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0196903_15	742733.HMPREF9469_01821	135.0	6.97999e-40	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0196903_15	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0196903_15	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_16	phrog_2724	49.7	0.000000000000069	N/A	unknown function
UniRef90	UHGV-0196903_16	UniRef90_A0A1G8IAC0	57.0	0.00000000836	Rho termination factor, N-terminal domain	N/A
Pfam	UHGV-0196903_16	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
structural_annotation	UHGV-0196903_16	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_17	phrog_10	169.1	0	major head protein	head and packaging
UniRef90	UHGV-0196903_17	UniRef90_UPI0018A03EFB	461.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0196903_17	1123250.KB908414_gene2105	390.0	0	Phage capsid family	N/A
Pfam	UHGV-0196903_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0196903_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0196903_17	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0196903_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_18	phrog_172	166.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0196903_18	UniRef90_UPI001571586D	225.0	0	N/A	N/A
eggNOG-mapper	UHGV-0196903_18	742733.HMPREF9469_01824	219.0	0	N/A	N/A
Pfam	UHGV-0196903_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0196903_18	PF14265	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0196903_19	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_22	phrog_34731	61.5	1.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0196903_22	1400520.LFAB_08810	65.1	0.000000000000153	N/A	N/A
structural_annotation	UHGV-0196903_22	PF02699,MF_00369,TIGR00739,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_23	phrog_2841	331.2	0	minor head protein	head and packaging
UniRef90	UHGV-0196903_23	UniRef90_A0A6N7WK42	824.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0196903_23	742733.HMPREF9469_01825	421.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0196903_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0196903_23	PF21814	N/A	N/A	N/A	DUF6883
NCBIFam	UHGV-0196903_23	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0196903_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0196903_23	PF21814,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_24	phrog_64	386.5	0	portal protein	head and packaging
UniRef90	UHGV-0196903_24	UniRef90_A0A1C5ZPW9	728.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0196903_24	742733.HMPREF9469_01826	687.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0196903_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0196903_24	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0196903_24	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0196903_25	K06909	371.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0196903_25	phrog_3717	159.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0196903_25	UniRef90_A0A4Q7PPR0	817.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0196903_25	742733.HMPREF9469_01827	700.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0196903_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0196903_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0196903_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0196903_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0196903_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0196903_26	K07474	144.9	8.50588e-43	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0196903_26	phrog_51	161.0	0	terminase small subunit	head and packaging
UniRef90	UHGV-0196903_26	UniRef90_A0A1I0K734	253.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0196903_26	1298920.KI911353_gene4857	233.0	0	Terminase small subunit	N/A
Pfam	UHGV-0196903_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0196903_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0196903_26	PF03592,COG3728	N/A	N/A	N/A	N/A
Pfam	UHGV-0196903_28	PF21732	N/A	N/A	N/A	DUF6864
structural_annotation	UHGV-0196903_28	PF21732	N/A	N/A	N/A	N/A
PHROG	UHGV-0196903_29	phrog_36	51.6	0.000000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0196903_29	UniRef90_A0A1E3A376	255.0	0	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0196903_29	33035.JPJF01000107_gene434	100.0	4.39e-25	Sigma-70, region 4	N/A
Pfam	UHGV-0196903_29	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0196903_29	PF04545,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A