UHGV-0197751 (vOTU-047387)

Viral Genome: UHGV-0197751

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0197751
vOTU ID	vOTU-047387
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781725_a1_ct8891@circular@Podoviridae__sp._ctWed891
Associated BioSample	SAMN09781725
Viral genome confidence	Confident

Quality assessment
CheckV method	DTR
CheckV completeness	100 (Complete)
Trimmed provirus	No
CheckV viral markers	4
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9788
Virus hallmark genes (geNomad)	7
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.8
Jumbo phage	No

Genome content
Genome length (bp)	42,386
GC content	53.05%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	51
CDS density	92%
Average CDS length (bps)	765.65
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0197751_1	phrog_3754	89.8	2.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-0197751_1	476272.RUMHYD_01764	154.0	0	N/A	N/A
PHROG	UHGV-0197751_2	phrog_21718	125.8	2.3e-37	N/A	unknown function
eggNOG-mapper	UHGV-0197751_2	397290.C810_05210	89.7	2.47e-20	N/A	N/A
PHROG	UHGV-0197751_3	phrog_22984	79.2	2.5e-23	N/A	unknown function
PHROG	UHGV-0197751_4	phrog_16490	180.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0197751_4	1408437.JNJN01000043_gene803	89.7	1.09e-18	N/A	N/A
PHROG	UHGV-0197751_5	phrog_20016	208.0	0	N/A	unknown function
UniRef90	UHGV-0197751_5	UniRef90_A0A285PT46	187.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0197751_5	1226322.HMPREF1545_00077	194.0	0	N/A	N/A
structural_annotation	UHGV-0197751_5	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_6	phrog_28802	43.4	0.0000000000042	N/A	unknown function
structural_annotation	UHGV-0197751_6	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0197751_7	K23779	54.1	0.0000000000000038	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0197751_7	phrog_5823	49.6	0.000000000000035	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0197751_7	742738.HMPREF9460_04059	52.0	0.0000078	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0197751_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0197751_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0197751_8	UniRef90_F5L211	80.9	1.73e-17	Conserved domain protein	N/A
structural_annotation	UHGV-0197751_8	PF19923	N/A	N/A	N/A	N/A
KOfam	UHGV-0197751_9	K14059	76.1	6e-22	int; integrase	N/A
PHROG	UHGV-0197751_9	phrog_1	114.6	1.1e-33	integrase	integration and excision
UniRef90	UHGV-0197751_9	UniRef90_A0A2N2CRL9	264.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0197751_9	693746.OBV_43340	246.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0197751_9	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0197751_9	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0197751_9	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197751_10	UniRef90_R6GNZ5	96.7	2.07e-21	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0197751_10	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0197751_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0197751_10	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_12	phrog_14556	42.5	0.0000000000067	N/A	unknown function
eggNOG-mapper	UHGV-0197751_12	1410653.JHVC01000032_gene1036	69.3	0.0000000000383	domain protein	N/A
COG	UHGV-0197751_12	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
PHROG	UHGV-0197751_13	phrog_8	43.8	0.0000000000045	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0197751_13	411462.DORLON_00819	52.4	0.00000129	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0197751_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0197751_13	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0197751_13	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_14	phrog_8	48.1	0.00000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0197751_14	UniRef90_UPI001C009F10	97.8	7.79e-25	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0197751_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0197751_14	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0197751_15	phrog_5070	160.1	0	N/A	unknown function
UniRef90	UHGV-0197751_15	UniRef90_C6L9Y5	108.0	7.1e-26	Bacterial transferase hexapeptide repeat protein	N/A
eggNOG-mapper	UHGV-0197751_15	411470.RUMGNA_02189	109.0	5.5e-27	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
COG	UHGV-0197751_15	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
PHROG	UHGV-0197751_19	phrog_111	115.0	5.2e-34	DNA methyltransferase	other
UniRef90	UHGV-0197751_19	UniRef90_A0A1Q6T6T6	253.0	0	Adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0197751_19	445972.ANACOL_03344	158.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0197751_19	oMTase_00015	123.6	1.2e-36	orphan methyltransferase	RM
Pfam	UHGV-0197751_19	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
KOfam	UHGV-0197751_20	K00571	98.6	7.1e-29	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0197751_20	phrog_23224	202.9	0	DNA methyltransferase	other
UniRef90	UHGV-0197751_20	UniRef90_A0A1Q6T6B8	469.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0197751_20	718252.FP2_06750	366.0	0	DNA methylase	N/A
PADLOC	UHGV-0197751_20	MTase_II_00172	78.2	2.5e-24	Type II methyltransferase	RM
Pfam	UHGV-0197751_20	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0197751_20	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0197751_20	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_21	phrog_24518	71.0	5.8e-21	N/A	unknown function
PHROG	UHGV-0197751_22	phrog_3136	131.9	2.1e-39	N/A	unknown function
UniRef90	UHGV-0197751_22	UniRef90_A0A3D0HBD2	170.0	0	ASCH domain-containing protein	N/A
COG	UHGV-0197751_22	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0197751_22	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197751_23	PF02888	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_26	phrog_424	103.4	2.5e-30	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0197751_26	UniRef90_UPI001EDF1E9D	429.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0197751_26	693746.OBV_42570	357.0	0	N/A	N/A
PADLOC	UHGV-0197751_26	SspD_00001	65.7	1.1e-18	SspD	SSP
COG	UHGV-0197751_26	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0197751_26	PF01507,MF_00063,NF005316,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_27	phrog_3584	229.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197751_27	UniRef90_UPI001C02C5E0	239.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197751_27	718252.FP2_16510	237.0	0	N/A	N/A
structural_annotation	UHGV-0197751_27	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_28	phrog_37023	218.5	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197751_28	UniRef90_A0A3E2TEP1	200.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197751_28	936573.HMPREF1147_1309	52.8	0.00000176	N/A	N/A
Pfam	UHGV-0197751_28	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0197751_28	PF06356,MF_04160,NF002584	N/A	N/A	N/A	N/A
KOfam	UHGV-0197751_30	K07483	42.4	0.000000000015	K07483; transposase	N/A
UniRef90	UHGV-0197751_30	UniRef90_UPI00195E9406	112.0	9.09e-28	transposase	N/A
Pfam	UHGV-0197751_30	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
KOfam	UHGV-0197751_31	K06909	114.0	1.6e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0197751_31	phrog_979	159.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0197751_31	UniRef90_UPI00164BD94B	506.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0197751_31	1408437.JNJN01000002_gene1397	449.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0197751_31	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0197751_31	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0197751_31	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_32	phrog_156	168.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0197751_32	693746.OBV_23930	313.0	0	N/A	N/A
structural_annotation	UHGV-0197751_32	PF12236,MF_04120,TIGR01542,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_35	phrog_24113	64.3	1.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0197751_35	1226322.HMPREF1545_03847	62.0	0.000000000198	N/A	N/A
structural_annotation	UHGV-0197751_35	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_36	phrog_371	139.6	9.99967e-42	major head protein	head and packaging
UniRef90	UHGV-0197751_36	UniRef90_A0A1Y4TDW7	439.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0197751_36	1226322.HMPREF1545_03848	283.0	0	N/A	N/A
Pfam	UHGV-0197751_36	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0197751_36	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_38	phrog_13046	70.0	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0197751_38	693746.OBV_23880	97.8	1.58e-22	N/A	N/A
structural_annotation	UHGV-0197751_38	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_39	phrog_3287	140.1	1.29998e-41	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0197751_39	665956.HMPREF1032_03917	678.0	0	N/A	N/A
structural_annotation	UHGV-0197751_39	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197751_40	665956.HMPREF1032_03918	64.3	0.00000000175	prophage protein Bartonella henselae str. Houston-1 gi 49237922 emb CAF27125.1	N/A
KOfam	UHGV-0197751_46	K07273	173.6	0	acm; lysozyme	N/A
PHROG	UHGV-0197751_46	phrog_291	148.1	7.14662e-44	endolysin	lysis
UniRef90	UHGV-0197751_46	UniRef90_UPI00195E5E78	209.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0197751_46	411471.SUBVAR_06927	202.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0197751_46	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0197751_46	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0197751_46	PF01183,MF_02227,NF002576,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_47	phrog_937	47.2	0.00000000000036	hemolysin	other
eggNOG-mapper	UHGV-0197751_47	693746.OBV_19000	54.7	0.000000043	N/A	N/A
PHROG	UHGV-0197751_48	phrog_1129	75.1	5.8e-22	holin	lysis
UniRef90	UHGV-0197751_48	UniRef90_A0A1G9U2I2	91.3	5.17e-22	Phage holin family Hol44, holin superfamily V	N/A
eggNOG-mapper	UHGV-0197751_48	1304866.K413DRAFT_0135	85.1	2.27e-20	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0197751_48	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0197751_48	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0197751_50	phrog_22978	464.8	0	N/A	unknown function
UniRef90	UHGV-0197751_50	UniRef90_E2ZIB5	418.0	0	Putative septum site-determining protein MinC	N/A
eggNOG-mapper	UHGV-0197751_50	748224.HMPREF9436_01406	418.0	0	N/A	N/A
Pfam	UHGV-0197751_50	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-0197751_50	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
structural_annotation	UHGV-0197751_51	PF07638,MF_00674,TIGR02954,COG1846	N/A	N/A	N/A	N/A