UHGV-0199080 (vOTU-062987)

Viral Genome: UHGV-0199080

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0199080
vOTU ID	vOTU-062987
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN05826605_a1_ct23794_vs1@linear@Siphoviridae__sp._ctoop1
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	96.78 (High-quality)
Trimmed provirus	No
CheckV viral markers	17
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9742
Virus hallmark genes (geNomad)	10
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	29.67
Jumbo phage	No

Genome content
Genome length (bp)	37,372
GC content	42.34%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	53
CDS density	92%
Average CDS length (bps)	650.60
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 96.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0199080_1	phrog_1847	315.3	0	N/A	unknown function
UniRef90	UHGV-0199080_1	UniRef90_UPI001E30C708	328.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0199080_1	1256908.HMPREF0373_00641	337.0	0	T5orf172	N/A
Pfam	UHGV-0199080_1	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-0199080_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0199080_1	PF19962,MF_01506	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_2	phrog_16228	217.4	0	N/A	unknown function
UniRef90	UHGV-0199080_2	UniRef90_R6S821	323.0	0	Uma2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0199080_2	537007.BLAHAN_04955	310.0	0	Putative restriction endonuclease	N/A
Pfam	UHGV-0199080_2	PF05685	N/A	N/A	Putative restriction endonuclease	Uma2
COG	UHGV-0199080_2	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0199080_2	PF05685,COG4636	N/A	N/A	N/A	N/A
KOfam	UHGV-0199080_3	K14623	364.7	0	dinD; DNA-damage-inducible protein D	N/A
PHROG	UHGV-0199080_3	phrog_8036	386.5	0	N/A	unknown function
UniRef90	UHGV-0199080_3	UniRef90_A0A564VLU3	487.0	0	DNA-damage-inducible protein D	N/A
eggNOG-mapper	UHGV-0199080_3	97139.C824_05946	418.0	0	N/A	N/A
AcrCatalog	UHGV-0199080_3	cluster_17589	152.0	0	NA	N/A
PADLOC	UHGV-0199080_3	Specificity_I_00032	359.0	0	Type I specificity subunit	RM
Pfam	UHGV-0199080_3	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
NCBIFam	UHGV-0199080_3	NF008573.0	N/A	N/A	DNA damage-inducible protein D	N/A
COG	UHGV-0199080_3	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0199080_3	PF09669,NF008573,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-0199080_4	K14059	64.3	8.3e-19	int; integrase	N/A
PHROG	UHGV-0199080_4	phrog_1	85.9	5e-25	integrase	integration and excision
UniRef90	UHGV-0199080_4	UniRef90_A0A6L8SXX0	449.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0199080_4	1235792.C808_05256	384.0	0	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0199080_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0199080_4	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0199080_5	K01448	86.3	4.1e-25	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0199080_5	phrog_435	154.9	0	endolysin	lysis
UniRef90	UHGV-0199080_5	UniRef90_A0A6N2RSZ1	372.0	0	N-acetylmuramoyl-L-alanine amidase CwlH	N/A
eggNOG-mapper	UHGV-0199080_5	411459.RUMOBE_00909	337.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0199080_5	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0199080_5	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0199080_5	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0199080_5	PF01832,NF008758,NF009354,COG5632,COG4193	N/A	N/A	N/A	N/A
KOfam	UHGV-0199080_6	K07741	53.2	0.0000000000000096	antB; anti-repressor protein	N/A
PHROG	UHGV-0199080_6	phrog_130	198.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0199080_6	UniRef90_R5RTD8	342.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0199080_6	658655.HMPREF0988_00912	293.0	0	Phage antirepressor protein KilAC domain	N/A
Pfam	UHGV-0199080_6	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0199080_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0199080_6	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0199080_6	PF03374,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_7	phrog_1129	63.2	2.8e-18	holin	lysis
UniRef90	UHGV-0199080_7	UniRef90_UPI001C01C03F	159.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0199080_7	1235798.C817_03464	137.0	5.02001e-41	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0199080_7	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0199080_7	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0199080_8	33035.JPJF01000090_gene94	117.0	3.49e-33	N/A	N/A
PHROG	UHGV-0199080_9	phrog_2566	56.8	3.2e-16	N/A	unknown function
PHROG	UHGV-0199080_10	phrog_6616	118.2	5.4e-35	tail protein	tail
UniRef90	UHGV-0199080_10	UniRef90_A0A356C4L7	396.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0199080_10	1232453.BAIF02000058_gene1641	436.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0199080_10	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0199080_10	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0199080_10	PF05113,PF03944,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-0199080_11	UniRef90_A0A7C6P910	57.8	0.0000000369	N/A	N/A
eggNOG-mapper	UHGV-0199080_11	272562.CA_C1880	62.4	0.000000000103	N/A	N/A
structural_annotation	UHGV-0199080_11	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_12	phrog_1194	71.6	8.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0199080_12	33035.JPJF01000093_gene2242	151.0	0	N/A	N/A
structural_annotation	UHGV-0199080_12	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_13	phrog_1535	534.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0199080_13	UniRef90_A0A1C5RGR7	957.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0199080_13	33035.JPJF01000093_gene2243	814.0	0	phage tail tape measure protein	N/A
COG	UHGV-0199080_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0199080_13	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_14	phrog_8355	103.2	8.2e-31	N/A	unknown function
UniRef90	UHGV-0199080_14	UniRef90_UPI001D0684E3	103.0	3.65e-27	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0199080_14	33035.JPJF01000093_gene2244	102.0	1.64e-27	N/A	N/A
PHROG	UHGV-0199080_15	phrog_8300	103.6	1.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0199080_15	1282664.H354_06701	74.3	5.37e-16	N/A	N/A
structural_annotation	UHGV-0199080_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_16	phrog_820	113.5	1e-33	major tail protein	tail
eggNOG-mapper	UHGV-0199080_16	33035.JPJF01000093_gene2246	241.0	0	N/A	N/A
structural_annotation	UHGV-0199080_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_17	phrog_2595	66.6	3.2e-19	head-tail connector protein	connector
UniRef90	UHGV-0199080_17	UniRef90_UPI001C0EB705	157.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0199080_17	483218.BACPEC_01150	102.0	3.59e-26	N/A	N/A
Pfam	UHGV-0199080_17	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0199080_17	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_18	phrog_556	61.0	1.7e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0199080_18	742740.HMPREF9474_03509	176.0	0	N/A	N/A
PHROG	UHGV-0199080_19	phrog_8710	134.4	3.20001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0199080_19	742740.HMPREF9474_03508	140.0	1.15999e-41	N/A	N/A
structural_annotation	UHGV-0199080_19	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_20	phrog_541	77.0	2e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0199080_20	33035.JPJF01000093_gene2250	187.0	0	N/A	N/A
PHROG	UHGV-0199080_21	phrog_15682	61.5	1.2e-17	N/A	unknown function
UniRef90	UHGV-0199080_21	UniRef90_J5WK97	72.8	0.00000000000000213	Rho termination factor, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0199080_21	469618.FVAG_01311	73.9	2.55e-16	N/A	N/A
PHROG	UHGV-0199080_22	phrog_212	292.9	0	major head protein	head and packaging
UniRef90	UHGV-0199080_22	UniRef90_A0A416Q289	568.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0199080_22	1151292.QEW_2433	491.0	0	N/A	N/A
structural_annotation	UHGV-0199080_22	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_23	phrog_194	162.4	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0199080_23	UniRef90_UPI001D02A5C9	241.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0199080_23	1294142.CINTURNW_1028	158.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0199080_23	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0199080_23	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_24	phrog_581	253.8	0	minor head protein	head and packaging
UniRef90	UHGV-0199080_24	UniRef90_R5F6J4	689.0	0	PBECR2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0199080_24	33035.JPJF01000093_gene2255	504.0	0	N/A	N/A
Pfam	UHGV-0199080_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0199080_24	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
COG	UHGV-0199080_24	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0199080_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_25	phrog_25639	114.5	3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0199080_25	742740.HMPREF9474_03502	90.9	4.23e-23	N/A	N/A
PHROG	UHGV-0199080_26	phrog_533	264.7	0	portal protein	head and packaging
UniRef90	UHGV-0199080_26	UniRef90_UPI00115A2EE2	795.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0199080_26	394503.Ccel_3049	526.0	0	N/A	N/A
structural_annotation	UHGV-0199080_26	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0199080_27	K06909	89.0	6.7e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0199080_27	phrog_10250	42.4	0.0000000000067	N/A	unknown function
UniRef90	UHGV-0199080_27	UniRef90_UPI001C114A0D	825.0	0	terminase	N/A
eggNOG-mapper	UHGV-0199080_27	1304866.K413DRAFT_0811	702.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0199080_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0199080_27	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0199080_28	K07474	162.8	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0199080_28	phrog_51	156.3	0	terminase small subunit	head and packaging
UniRef90	UHGV-0199080_28	UniRef90_R5QUM6	286.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0199080_28	742740.HMPREF9474_03499	255.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0199080_28	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0199080_28	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0199080_28	PF03592,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0199080_29	PF07705,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0199080_30	748449.Halha_2167	61.2	0.00000000373	N/A	N/A
structural_annotation	UHGV-0199080_30	PF15968	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_31	phrog_10865	151.8	2.8026e-45	N/A	unknown function
eggNOG-mapper	UHGV-0199080_31	1031288.AXAA01000022_gene1578	136.0	2.29e-35	N/A	N/A
Pfam	UHGV-0199080_31	PF20505	N/A	N/A	N/A	DUF6731
structural_annotation	UHGV-0199080_31	PF20505,NF001463	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_32	phrog_36	54.9	0.0000000000000017	transcriptional regulator	transcription regulation
UniRef90	UHGV-0199080_32	UniRef90_A0A416Q281	200.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0199080_32	1235792.C808_05326	187.0	0	N/A	N/A
structural_annotation	UHGV-0199080_32	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_35	phrog_23707	82.4	5.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0199080_35	552398.HMPREF0866_01624	75.1	0.0000000000000102	N/A	N/A
PHROG	UHGV-0199080_36	phrog_15198	81.9	2.8e-24	N/A	unknown function
UniRef90	UHGV-0199080_36	UniRef90_A0A2N5PB17	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0199080_36	742723.HMPREF9477_00919	105.0	1.33e-25	N/A	N/A
Pfam	UHGV-0199080_36	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0199080_37	phrog_12728	81.7	2.8e-24	N/A	unknown function
UniRef90	UHGV-0199080_37	UniRef90_A0A6H0X686	89.4	1.86e-21	Putative signal peptide-containing lipoprotein	N/A
eggNOG-mapper	UHGV-0199080_37	742765.HMPREF9457_02125	105.0	1.38e-28	N/A	N/A
PHROG	UHGV-0199080_40	phrog_7566	104.2	5.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0199080_40	693746.OBV_24070	62.0	0.0000000000732	N/A	N/A
PHROG	UHGV-0199080_41	phrog_15982	152.1	2.8026e-45	N/A	unknown function
UniRef90	UHGV-0199080_41	UniRef90_A5ZPN2	311.0	0	N/A	N/A
eggNOG-mapper	UHGV-0199080_41	411459.RUMOBE_00949	311.0	0	N/A	N/A
Pfam	UHGV-0199080_41	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0199080_41	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0199080_41	PF12961,PF11300,MF_00771,NF002615,COG2411	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_43	phrog_17690	144.3	2.8026e-43	N/A	unknown function
eggNOG-mapper	UHGV-0199080_43	33035.JPJF01000123_gene2433	173.0	0	N/A	N/A
KOfam	UHGV-0199080_44	K03469	45.8	0.00000000000099	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0199080_44	phrog_531	46.6	0.00000000000054	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0199080_44	UniRef90_A0A173WRS0	105.0	1.01e-26	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0199080_44	411459.RUMOBE_00952	102.0	5.53e-26	RNase H	N/A
Pfam	UHGV-0199080_44	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0199080_44	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0199080_44	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_45	phrog_3584	158.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0199080_45	UniRef90_UPI001D0EB55A	385.0	0	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0199080_45	1235800.C819_02258	173.0	0	N/A	N/A
structural_annotation	UHGV-0199080_45	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0199080_51	phrog_6058	49.6	0.000000000000041	N/A	unknown function
eggNOG-mapper	UHGV-0199080_51	742733.HMPREF9469_05094	62.8	0.0000000000141	N/A	N/A
UniRef90	UHGV-0199080_53	UniRef90_A0A3S5FBF3	97.1	6.34e-25	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0199080_53	478749.BRYFOR_07571	112.0	8.61e-32	N/A	N/A
structural_annotation	UHGV-0199080_53	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A