Overview | |
---|---|
UHGV ID | UHGV-0199273 |
vOTU ID | vOTU-071230 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SAMN05826776_a1_ct8252_vs1@linear@Siphoviridae__sp._cte881 |
Associated BioSample | SAMN05826776 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 75.32 (Medium-quality) |
Trimmed provirus | No |
CheckV viral markers | 21 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9633 |
Virus hallmark genes (geNomad) | 10 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 45.35 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 28,737 |
GC content | 38.52% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 38 |
CDS density | 87% |
Average CDS length (bps) | 660.47 |
Total tRNA genes | 1 |
Suppressor tRNA genes | 0 |