Overview | |
---|---|
UHGV ID | UHGV-0200746 |
vOTU ID | vOTU-008983 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SAMN05414936_a1_ct13801_vs1@Siphoviridae__sp._ct8dK1 |
Associated BioSample | SAMN05414936 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 37.69 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 8 |
CheckV host markers | 2 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9782 |
Virus hallmark genes (geNomad) | 3 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Uncertain - plasmid or chromosomal |
viralVerify score | 1.71 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 17,660 |
GC content | 47.04% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 20 |
CDS density | 91% |
Average CDS length (bps) | 799.20 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |