UHGV-0201593 (vOTU-134467)

Viral Genome: UHGV-0201593

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0201593
vOTU ID	vOTU-134467
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781734_a1_ct16822_vs1@Siphoviridae__sp._ctZBX1
Associated BioSample	SAMN09781734
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	53.84 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	12
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9798
Virus hallmark genes (geNomad)	9
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	16.83
Jumbo phage	No

Genome content
Genome length (bp)	21,801
GC content	54.14%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	31
CDS density	95%
Average CDS length (bps)	669.77
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 53.84)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0201593_1	phrog_13845	57.8	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0201593_1	1399942.U3PDR2_9CAUD	66.6	0.00000000000296	N/A	N/A
structural_annotation	UHGV-0201593_1	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_2	phrog_9	246.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0201593_2	UniRef90_A0A2A7ALT4	1009.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0201593_2	1235792.C808_00083	617.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0201593_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0201593_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0201593_2	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_3	phrog_12	109.6	2.3e-32	portal protein	head and packaging
UniRef90	UHGV-0201593_3	UniRef90_A0A2A7B6S8	487.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0201593_3	349161.Dred_2606	263.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0201593_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0201593_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0201593_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0201593_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0201593_4	K01358	88.5	9.3e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0201593_4	phrog_94	137.4	1.4e-40	head maturation protease	head and packaging
UniRef90	UHGV-0201593_4	UniRef90_A0A0H5SII2	168.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0201593_4	1232452.BAIB02000007_gene1626	156.0	1.26117e-44	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0201593_4	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0201593_4	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0201593_4	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_5	phrog_10	157.5	0	major head protein	head and packaging
UniRef90	UHGV-0201593_5	UniRef90_A0A2A7B712	602.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0201593_5	1235792.C808_00086	417.0	0	Phage capsid family	N/A
Pfam	UHGV-0201593_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0201593_5	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0201593_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0201593_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0201593_5	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_6	phrog_749	53.8	0.0000000000000028	N/A	unknown function
eggNOG-mapper	UHGV-0201593_6	1415774.U728_1251	70.1	0.0000000000000395	N/A	N/A
PHROG	UHGV-0201593_7	phrog_19734	102.6	3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0201593_7	349161.Dred_2602	78.6	5.58e-17	N/A	N/A
structural_annotation	UHGV-0201593_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0201593_8	999413.HMPREF1094_02005	58.2	0.00000000214	N/A	N/A
structural_annotation	UHGV-0201593_8	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0201593_9	UniRef90_A0A1C6FG30	125.0	1.34e-33	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0201593_9	1235798.C817_04589	100.0	1.6e-24	N/A	N/A
structural_annotation	UHGV-0201593_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_10	phrog_88	88.4	7e-26	major tail protein	tail
UniRef90	UHGV-0201593_10	UniRef90_UPI0018771F27	117.0	1.47e-29	phage tail protein	N/A
eggNOG-mapper	UHGV-0201593_10	33035.JPJF01000039_gene278	56.2	0.000000517	N/A	N/A
NCBIFam	UHGV-0201593_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0201593_10	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_13	phrog_9959	94.5	6.6e-28	tail length tape measure protein	tail
UniRef90	UHGV-0201593_13	UniRef90_A0A2A7ALS3	942.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0201593_13	596328.HMPREF0578_1241	159.0	3.52e-37	phage tail tape measure protein	N/A
Pfam	UHGV-0201593_13	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0201593_13	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0201593_13	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0201593_13	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_14	phrog_33	75.6	1.1e-21	distal tail protein Dit	tail
UniRef90	UHGV-0201593_14	UniRef90_A0A2X2UUQ3	126.0	6.11e-32	Phage putative tail component	N/A
eggNOG-mapper	UHGV-0201593_14	632245.CLP_1659	73.2	0.000000000000855	tail component	N/A
COG	UHGV-0201593_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0201593_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_15	phrog_1067	215.9	0	minor head protein	head and packaging
UniRef90	UHGV-0201593_15	UniRef90_A0A2A7AM44	549.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0201593_15	1497679.EP56_07710	162.0	6.93e-40	Prophage endopeptidase tail	N/A
Pfam	UHGV-0201593_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0201593_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0201593_15	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0201593_15	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-0201593_18	K07273	178.5	0	acm; lysozyme	N/A
PHROG	UHGV-0201593_18	phrog_291	140.6	1.29998e-41	endolysin	lysis
UniRef90	UHGV-0201593_18	UniRef90_UPI001D0EE7D8	296.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0201593_18	748224.HMPREF9436_00154	293.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0201593_18	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0201593_18	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0201593_18	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_19	phrog_4105	87.9	8.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0201593_19	718252.FP2_06480	127.0	2.51e-37	N/A	N/A
PHROG	UHGV-0201593_20	phrog_263	84.2	8.9e-25	holin	lysis
UniRef90	UHGV-0201593_20	UniRef90_UPI001A9B035B	107.0	1.26e-28	phage holin	N/A
eggNOG-mapper	UHGV-0201593_20	411483.FAEPRAA2165_00003	102.0	8.71e-28	SPP1 phage holin	N/A
Pfam	UHGV-0201593_20	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0201593_20	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0201593_20	PF04688,TIGR01592	N/A	N/A	N/A	N/A
UniRef90	UHGV-0201593_23	UniRef90_A0A1Y3R5J8	50.1	0.000000922	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0201593_23	1160721.RBI_I00206	58.9	0.000000000051	N/A	N/A
Pfam	UHGV-0201593_23	PF09274	N/A	N/A	ParG	ParG
structural_annotation	UHGV-0201593_23	PF10723	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_24	phrog_99	43.6	0.000000000004	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0201593_24	UniRef90_A0A0K9N8D8	88.2	2.11e-17	Putative AP2 domain protein	N/A
eggNOG-mapper	UHGV-0201593_24	879308.HMPREF9130_0377	81.6	7.71e-16	N/A	N/A
structural_annotation	UHGV-0201593_24	PF18337,PF00847	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0201593_25	1235802.C823_04625	55.8	0.0000000714	N/A	N/A
structural_annotation	UHGV-0201593_25	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0201593_28	phrog_21718	40.3	0.000000000043	N/A	unknown function