Overview | |
---|---|
UHGV ID | UHGV-0201604 |
vOTU ID | vOTU-089420 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SAMN05827013_a1_ct14054_vs1@linear@Siphoviridae__sp._ctmoX1 |
Associated BioSample | SAMN05827013 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 45.31 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 13 |
CheckV host markers | 0 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9799 |
Virus hallmark genes (geNomad) | 7 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 35.03 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 18,412 |
GC content | 43.02% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 22 |
CDS density | 93% |
Average CDS length (bps) | 774.68 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |