Overview | |
---|---|
UHGV ID | UHGV-0202106 |
vOTU ID | vOTU-016096 |
Representative Genome? | No |
Source | CHVD |
Original genome ID | SAMN06164884_a1_ct7640_vs1@linear@Siphoviridae__sp._ctc001 |
Associated BioSample | SAMN06164884 |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 69.51 (Medium-quality) |
Trimmed provirus | Yes |
CheckV viral markers | 23 |
CheckV host markers | 3 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.969 |
Virus hallmark genes (geNomad) | 13 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 49.15 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 40,796 |
GC content | 53.20% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 48 |
CDS density | 95% |
Average CDS length (bps) | 810.06 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |