UHGV-0203119 (vOTU-023346)

Viral Genome: UHGV-0203119

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0203119
vOTU ID	vOTU-023346
Representative Genome?	Yes
Source	CHVD
Original genome ID	SRS142618_a1_ct90800_vs01@Caudovirales__sp._ctKWl50@linear
Associated BioSample	N/A
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	51.65 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	11
CheckV host markers	0
Recoded stop codon	No

Viral Content
geNomad score	0.9787
Virus hallmark genes (geNomad)	8
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	35.8
Jumbo phage	No

Genome content
Genome length (bp)	19,794
GC content	49.77%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	24
CDS density	95%
Average CDS length (bps)	784.38
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.65)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0203119_3	phrog_6616	351.9	0	tail protein	tail
UniRef90	UHGV-0203119_3	UniRef90_A0A412RR71	151.0	6.39e-34	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0203119_3	445971.ANASTE_00088	235.0	0	N/A	N/A
Pfam	UHGV-0203119_3	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0203119_3	PF05113,PF18957,NF033848,NF038186,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_4	phrog_1194	98.7	3.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0203119_4	1121866.AUGK01000003_gene1438	99.0	4.79e-25	N/A	N/A
structural_annotation	UHGV-0203119_4	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_5	phrog_1535	135.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0203119_5	246194.CHY_1662	221.0	0	lysine exporter protein (LysE YggA)	N/A
COG	UHGV-0203119_5	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-0203119_5	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0203119_6	UniRef90_R6P5B8	66.2	0.00000000000143	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0203119_6	1410612.JNKO01000043_gene2857	69.3	0.000000000000938	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0203119_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0203119_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0203119_6	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
COG	UHGV-0203119_9	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
PHROG	UHGV-0203119_10	phrog_2066	41.3	0.000000000023	N/A	unknown function
PHROG	UHGV-0203119_11	phrog_2115	53.3	0.0000000000000061	tail protein	tail
eggNOG-mapper	UHGV-0203119_11	1123230.ARQJ01000027_gene1345	52.8	0.000000329	N/A	N/A
PHROG	UHGV-0203119_12	phrog_158	72.0	1.1e-20	major tail protein	tail
UniRef90	UHGV-0203119_12	UniRef90_UPI001359F4A3	120.0	3.73e-32	phage tail tube protein	N/A
eggNOG-mapper	UHGV-0203119_12	650150.ERH_0618	115.0	4.76e-31	Phage tail tube protein	N/A
Pfam	UHGV-0203119_12	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-0203119_12	PF16461,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_13	phrog_78	64.9	1.3e-18	tail terminator	connector
eggNOG-mapper	UHGV-0203119_13	1209989.TepiRe1_1156	92.0	1.83e-22	N/A	N/A
structural_annotation	UHGV-0203119_13	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_14	phrog_5	103.3	2.5e-30	tail completion or Neck1 protein	connector
UniRef90	UHGV-0203119_14	UniRef90_A0A1M6MXQ2	144.0	9.86935e-42	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0203119_14	1499683.CCFF01000014_gene3905	114.0	3.26e-30	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0203119_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0203119_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0203119_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203119_15	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_17	phrog_283	268.2	0	major head protein	head and packaging
UniRef90	UHGV-0203119_17	UniRef90_A0A316RCU2	426.0	0	P22 coat protein	N/A
eggNOG-mapper	UHGV-0203119_17	1297617.JPJD01000059_gene2633	427.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0203119_17	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0203119_17	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_18	phrog_194	124.5	8.6e-37	head scaffolding protein	head and packaging
UniRef90	UHGV-0203119_18	UniRef90_UPI0018A8F1CB	122.0	1.1e-31	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0203119_18	169963.lmo2297	95.9	3.39e-22	Phage minor structural protein GP20	N/A
Pfam	UHGV-0203119_18	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0203119_21	phrog_2841	355.0	0	minor head protein	head and packaging
UniRef90	UHGV-0203119_21	UniRef90_UPI001C11FEDD	381.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0203119_21	742733.HMPREF9469_01825	318.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0203119_21	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0203119_21	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0203119_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203119_21	PF04233,TIGR01641,COG2357	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_22	phrog_64	314.5	0	portal protein	head and packaging
UniRef90	UHGV-0203119_22	UniRef90_A0A3D4VRW3	483.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0203119_22	97138.C820_00238	461.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0203119_22	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0203119_22	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0203119_22	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0203119_23	K06909	420.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0203119_23	phrog_3717	150.6	7.00649e-45	terminase large subunit	head and packaging
UniRef90	UHGV-0203119_23	UniRef90_A0A1C6GFY7	709.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0203119_23	411461.DORFOR_01162	612.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0203119_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0203119_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0203119_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0203119_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0203119_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0203119_24	phrog_1171	44.0	0.000000000002	tail spike protein	tail
eggNOG-mapper	UHGV-0203119_24	1408428.JNJP01000079_gene3365	67.0	0.00000000248	Phage tail-collar fibre protein	N/A
COG	UHGV-0203119_24	COG4675	N/A	N/A	Phage tail collar domain	N/A