UHGV-0204689 (vOTU-153891)

Viral Genome: UHGV-0204689

Genome Information

Genome (FASTA) Annotation track (GFF) Proteins (FASTA) Protein annotation (TSV)

Overview
UHGV ID	UHGV-0204689
vOTU ID	vOTU-153891
Representative Genome?	Yes
Source	CHVD
Original genome ID	SAMN09781780_a1_ct39824_vs1@Myoviridae__sp._ctcNk1
Associated BioSample	SAMN09781780
Viral genome confidence	Confident

Quality assessment
CheckV method	AAI-based
CheckV completeness	61.37 (Medium-quality)
Trimmed provirus	No
CheckV viral markers	9
CheckV host markers	1
Recoded stop codon	No

Viral Content
geNomad score	0.9822
Virus hallmark genes (geNomad)	6
Plasmid hallmark genes (geNomad)	0
viralVerify prediction	Virus
viralVerify score	26.27
Jumbo phage	No

Genome content
Genome length (bp)	26,064
GC content	52.67%
Genetic code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS genes	44
CDS density	92%
Average CDS length (bps)	542.46
Total tRNA genes	0
Suppressor tRNA genes	0

Genome content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 61.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0204689_1	phrog_2468	107.7	1.2e-31	head morphogenesis	head and packaging
UniRef90	UHGV-0204689_1	UniRef90_A0A810PSD3	481.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0204689_1	1111121.HMPREF1247_0797	143.0	6.72e-36	cell adhesion	N/A
Pfam	UHGV-0204689_1	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0204689_1	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0204689_1	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_2	phrog_5	68.5	1.1e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-0204689_2	UniRef90_A0A4D7AJK9	190.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0204689_2	929506.CbC4_1219	100.0	4.28e-25	N/A	N/A
Pfam	UHGV-0204689_2	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0204689_2	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_4	phrog_3896	56.0	4.8e-16	N/A	unknown function
eggNOG-mapper	UHGV-0204689_4	476272.RUMHYD_01985	49.7	0.000000192	N/A	N/A
KOfam	UHGV-0204689_6	K07741	74.1	4.3e-21	antB; anti-repressor protein	N/A
PHROG	UHGV-0204689_6	phrog_130	225.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0204689_6	UniRef90_A0A6N2R468	366.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0204689_6	1289596.M1PKL6_9CAUD	259.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0204689_6	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0204689_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0204689_6	PF02498,PF03374,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0204689_7	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_8	phrog_544	190.6	0	major head protein	head and packaging
UniRef90	UHGV-0204689_8	UniRef90_A0A810PZM2	500.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0204689_8	1347392.CCEZ01000005_gene1236	290.0	0	N/A	N/A
structural_annotation	UHGV-0204689_8	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_9	phrog_541	109.2	2.1e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0204689_9	642492.Clole_0822	68.6	0.000000000000716	N/A	N/A
PHROG	UHGV-0204689_10	phrog_3366	91.4	8.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-0204689_10	1226322.HMPREF1545_00053	154.0	0	N/A	N/A
structural_annotation	UHGV-0204689_10	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_11	phrog_556	77.0	1.9e-22	minor head protein	head and packaging
UniRef90	UHGV-0204689_11	UniRef90_UPI00195E1497	184.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0204689_11	1226322.HMPREF1545_00054	152.0	1.4013e-45	Minor capsid protein	N/A
Pfam	UHGV-0204689_11	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0204689_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_12	phrog_3266	63.5	2.9e-18	tail completion	connector
UniRef90	UHGV-0204689_12	UniRef90_A0A2Z4QA01	120.0	1.01e-32	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0204689_12	1232443.BAIA02000078_gene24	184.0	0	N/A	N/A
structural_annotation	UHGV-0204689_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_13	phrog_3099	89.8	3.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0204689_13	1226322.HMPREF1545_00056	244.0	0	N/A	N/A
structural_annotation	UHGV-0204689_13	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_14	phrog_11299	81.8	8.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0204689_14	693746.OBV_18160	194.0	0	N/A	N/A
structural_annotation	UHGV-0204689_14	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_15	phrog_706	126.9	1.3e-37	N/A	unknown function
UniRef90	UHGV-0204689_15	UniRef90_UPI000682A80B	215.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0204689_15	693746.OBV_18170	208.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0204689_15	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0204689_15	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0204689_16	K07448	114.2	1e-33	mrr; restriction system protein	N/A
PHROG	UHGV-0204689_16	phrog_19856	46.4	0.00000000000038	N/A	unknown function
UniRef90	UHGV-0204689_16	UniRef90_A0A417P7U8	148.0	8.32e-39	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0204689_16	1235790.C805_00010	164.0	0	Restriction endonuclease	N/A
PADLOC	UHGV-0204689_16	ZorD1_00005	66.9	2.1e-19	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0204689_16	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0204689_16	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-0204689_16	PF04471,MF_00584,NF040854,COG1787	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_17	phrog_1535	99.8	4.99997e-41	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0204689_17	693746.OBV_18190	337.0	0	domain protein	N/A
COG	UHGV-0204689_17	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0204689_17	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_18	phrog_1194	61.0	1.8e-17	N/A	unknown function
eggNOG-mapper	UHGV-0204689_18	1226322.HMPREF1545_00060	236.0	0	N/A	N/A
structural_annotation	UHGV-0204689_18	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_19	phrog_13879	251.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0204689_19	1226322.HMPREF1545_00061	495.0	0	N/A	N/A
structural_annotation	UHGV-0204689_19	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
KOfam	UHGV-0204689_21	K01361	62.2	3.3e-18	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0204689_21	phrog_11157	230.1	0	N/A	unknown function
UniRef90	UHGV-0204689_21	UniRef90_UPI001C10C6DC	392.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0204689_21	1256908.HMPREF0373_00674	295.0	0	N/A	N/A
Pfam	UHGV-0204689_21	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0204689_21	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0204689_21	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0204689_21	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_22	phrog_18725	72.3	3.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-0204689_22	1235797.C816_02657	78.2	0.0000000000000502	N/A	N/A
COG	UHGV-0204689_22	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0204689_22	PF13754,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_24	phrog_2295	52.7	2.9e-18	N/A	unknown function
Pfam	UHGV-0204689_24	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0204689_24	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_25	phrog_2295	40.8	1.3e-17	N/A	unknown function
Pfam	UHGV-0204689_25	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0204689_25	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_27	phrog_2310	58.7	5.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0204689_27	1151292.QEW_0364	53.9	0.00000000289	N/A	N/A
PHROG	UHGV-0204689_29	phrog_1863	63.6	1.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0204689_29	748224.HMPREF9436_00408	95.1	6.86e-25	N/A	N/A
PHROG	UHGV-0204689_30	phrog_881	67.3	1.5e-19	holin	lysis
UniRef90	UHGV-0204689_30	UniRef90_A0A8D9PDR9	93.2	1.82e-23	Holin	N/A
eggNOG-mapper	UHGV-0204689_30	326426.Bbr_0318	77.8	4.23e-18	Putative phage holin Dp-1	N/A
Pfam	UHGV-0204689_30	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0204689_30	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_31	phrog_435	57.5	2.5e-16	endolysin	lysis
UniRef90	UHGV-0204689_31	UniRef90_A0A8D9PDX2	362.0	0	MurNAc-LAA protein	N/A
eggNOG-mapper	UHGV-0204689_31	1226322.HMPREF1545_01953	82.4	5.6e-16	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-0204689_31	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0204689_31	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_33	phrog_3754	114.6	6.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0204689_33	1226322.HMPREF1545_00073	171.0	0	N/A	N/A
PHROG	UHGV-0204689_34	phrog_21718	106.1	2.9e-31	N/A	unknown function
eggNOG-mapper	UHGV-0204689_34	397290.C810_05210	75.1	0.00000000000000662	N/A	N/A
PHROG	UHGV-0204689_35	phrog_22984	84.2	8.7e-25	N/A	unknown function
PHROG	UHGV-0204689_36	phrog_16490	164.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0204689_36	1408437.JNJN01000043_gene803	105.0	1.44e-24	N/A	N/A
PHROG	UHGV-0204689_37	phrog_20016	200.1	0	N/A	unknown function
UniRef90	UHGV-0204689_37	UniRef90_A0A285PT46	190.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0204689_37	1226322.HMPREF1545_00077	169.0	0	N/A	N/A
structural_annotation	UHGV-0204689_37	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0204689_38	phrog_28802	66.5	2.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0204689_38	476272.RUMHYD_01772	52.0	0.00000303	N/A	N/A
structural_annotation	UHGV-0204689_38	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0204689_39	1226322.HMPREF1545_00079	90.9	2.51e-22	N/A	N/A
KOfam	UHGV-0204689_40	K06400	289.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0204689_40	phrog_95	287.4	0	integrase	integration and excision
UniRef90	UHGV-0204689_40	UniRef90_A0A1C6HT72	371.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0204689_40	357809.Cphy_2997	271.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0204689_40	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0204689_40	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0204689_40	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0204689_40	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0204689_41	UniRef90_A0A8D9UHA6	293.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0204689_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0204689_41	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A