Overview | |
---|---|
UHGV ID | UHGV-0204729 |
vOTU ID | vOTU-170615 |
Representative Genome? | Yes |
Source | CHVD |
Original genome ID | SAMN10080904_a1_ct12861_vs1@linear@Siphoviridae__sp._ct5bI1 |
Associated BioSample | N/A |
Viral genome confidence | Confident |
Quality assessment | |
---|---|
CheckV method | AAI-based |
CheckV completeness | 47.06 (Low-quality) |
Trimmed provirus | No |
CheckV viral markers | 10 |
CheckV host markers | 1 |
Recoded stop codon | No |
Viral Content | |
---|---|
geNomad score | 0.9828 |
Virus hallmark genes (geNomad) | 7 |
Plasmid hallmark genes (geNomad) | 0 |
viralVerify prediction | Virus |
viralVerify score | 32.64 |
Jumbo phage | No |
Genome content | |
---|---|
Genome length (bp) | 19,886 |
GC content | 53.84% |
Genetic code | The Standard Bacterial, Archaeal and Plant Plastid Code (11) |
CDS genes | 30 |
CDS density | 94% |
Average CDS length (bps) | 626.20 |
Total tRNA genes | 0 |
Suppressor tRNA genes | 0 |